prot_P-lacustris_contig1017.247.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1017.247.1
Unique Nameprot_P-lacustris_contig1017.247.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length403
Homology
BLAST of mRNA_P-lacustris_contig1017.247.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.750e-18
Identity = 105/375 (28.00%), Postives = 157/375 (41.87%), Query Frame = 0
Query:   42 ATGRQAPVTAFEFPVGKSD--------------GESKVFSVSTTSAKHRVIVIIKERKRGEKTVRDISCTGSTCKLVGPSSRQHVGDEDNAVDGICPHAKVVLGDNEEIKQNIPAATVETLGEEGIVARAKSVAESGCLGLKDVAEIEKLFKDAFEDGVPLLVRLGDTETFAVRE--RDHRSVPGCWGHVQTVDIALAAGATPASRRRSIERPNIQCKANGGYPCGIASGKPRGLKTCPHTLIVGL--------GVLGEHYRHKLAAQADVEG---GGDGEDF-VDSEIG--TGKAEWNNEKTRLMFVEKILHLLKVVGVLKFPVNPLLHLSKAAKDSMVGKDAVIRCHEN--MCSKCNRQYVVLKKQEAIAVTQ 384
            A  RQ     +EFP   S               G    +SV T++ ++RV VI    K G + +    C+   C+ +   S    GD  +A+   C HA+VV+   E  K ++P    + L   G    A     +G    + VA +      A ++G+PLLVR+G+T+ FAVR+  + +R+V G WGHV+                        QCKA+ G PC   + + +    C H  IV +        GV GE    +L    D++G   G +GE +  +  IG  TG A +   +  L F EK+  L  +  V KFPV        A  +   G     R H N   C+ C ++Y  L   EA  + Q
Sbjct:  258 AQNRQESTDVYEFPTTTSSPTAATTAASPTPPSGPGTTYSVCTSNGQNRVAVI----KAGARFL----CSRPDCRRIEGLSSAATGDTASALPSRCAHAEVVI---EAEKTSMPMPKADALLSAGDFESALDKVPAGTFNQRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKV---------------FQCKASDGSPCSDGASR-KSTGRCIHAAIVAVYIYDRYKSGVAGEEL--ELERDGDMDGMEFGPEGEGWGAEGTIGGDTGFASYTQGENPLYFGEKMAQLRVITAVYKFPV--------AEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQ 595          
BLAST of mRNA_P-lacustris_contig1017.247.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 4.860e-13
Identity = 71/268 (26.49%), Postives = 116/268 (43.28%), Query Frame = 0
Query:   42 ATGRQAPVTAFEFPVGKSD--------------GESKVFSVSTTSAKHRVIVIIKERKRGEKTVRDISCTGSTCKLVGPSSRQHVGDEDNAVDGICPHAKVVLGDNEEIKQNIPAATVETLGEEGIVARAKSVAESGCLGLKDVAEIEKLFKDAFEDGVPLLVRLGDTETFAVRE--RDHRSVPGCWGHVQTVDIALAAGATPASRRRSIERPNIQCKANGGYPCGIASGKPRGLKTCPHTLIVGLGVLGEHYRHKLAAQADVEGGGD 293
            A  RQ     +EFP   S               G    +SV T+++++RV VI    K G++ +    C+   C+ +   S    GD  +A+   C HA+VV+   E  + ++P    + L   G    A     +G    + VA +      A ++G+PLLVR+G+T+ FAVR+  + +R+V G WGHV+                        QCKA+ G PC  +S + +    C H  IV + +   +       + ++E  GD
Sbjct:  342 AQNRQESTDVYEFPTTTSSPTAATTAASPTPPSGPGTTYSVCTSNSQNRVAVI----KAGDRFL----CSRPDCRRIEGLSSAATGDTASALPSRCAHAEVVI---EAERTSMPMPKADALLSAGDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKV---------------FQCKASNGSPCSDSSSR-KSTGRCVHAAIVAVYIYDRYKSGVAGEELELERDGD 582          
BLAST of mRNA_P-lacustris_contig1017.247.1 vs. uniprot
Match: A0A6H5KZ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ13_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.350e-10
Identity = 74/263 (28.14%), Postives = 111/263 (42.21%), Query Frame = 0
Query:  140 IPAATVETLGEEGIVARAKSVAESGCLGLKDVAEIEKLFKDAFEDGVPLLVRLGDTETFAVRE--RDHRSVPGCWGHVQTVDIALAAGATPASRRRSIERPNIQCKANGGYPCGIASGKPRGLKTCPHTLIVGL--------GVLGEHYRHKLAAQADVEG---GGDGEDF-VDSEIG--TGKAEWNNEKTRLMFVEKILHLLKVVGVLKFPVNPLLHLSKAAKDSMVGKDAVIRCHEN--MCSKCNRQYVVLKKQEAIAVTQ 384
            +P    + L   G    A     +G    + VA +      A ++G+PLLVR+G+T+ FAVR+  + +R+V G WGHV+                        QCKA+ G PC  +S + +    C H  IV +        GV GE    +L    D++G   G +GE +  +  IG  TG A +   +  L F E++     +  V KFPV        A  +   G     R H N   C+ C ++Y  L   EA  + Q
Sbjct:    1 MPMPKADALLSAGDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKV---------------FQCKASNGSPCSDSSSR-KSTGRCVHAAIVAVYIYDRYKSGVAGEEL--ELERDGDMDGMEFGPEGEGWGAEDTIGGCTGFASYTQHENPLYFGEEMAQHRVITAVYKFPV--------AEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQ 237          
BLAST of mRNA_P-lacustris_contig1017.247.1 vs. uniprot
Match: A0A6H5K133_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K133_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.930e-7
Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  325 LLKVVGVLKFPVNPLLHLSKAAKDSMV-GKDAVIRCHENMCSKCNRQYVVLKKQEAIAVTQ 384
            L+K++GVL+FPVNP  HLS  A+  +V G D  I CHEN+C+ C R  VVL +QEAIA  Q
Sbjct:    4 LMKIIGVLRFPVNPEHHLSARARQILVEGSD--IPCHENVCAACLRGNVVLDRQEAIAARQ 62          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1017.247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6Z2_9PHAE2.750e-1828.00CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L8M0_9PHAE4.860e-1326.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ13_9PHAE2.350e-1028.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K133_9PHAE2.930e-755.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1017contigP-lacustris_contig1017:37955..40636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1017.247.1mRNA_P-lacustris_contig1017.247.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1017 34619..42294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1017.247.1 ID=prot_P-lacustris_contig1017.247.1|Name=mRNA_P-lacustris_contig1017.247.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=403bp
MPTEGSATECSCHGCKQTIARRLRGSERAADGAVQLSASSRATGRQAPVT
AFEFPVGKSDGESKVFSVSTTSAKHRVIVIIKERKRGEKTVRDISCTGST
CKLVGPSSRQHVGDEDNAVDGICPHAKVVLGDNEEIKQNIPAATVETLGE
EGIVARAKSVAESGCLGLKDVAEIEKLFKDAFEDGVPLLVRLGDTETFAV
RERDHRSVPGCWGHVQTVDIALAAGATPASRRRSIERPNIQCKANGGYPC
GIASGKPRGLKTCPHTLIVGLGVLGEHYRHKLAAQADVEGGGDGEDFVDS
EIGTGKAEWNNEKTRLMFVEKILHLLKVVGVLKFPVNPLLHLSKAAKDSM
VGKDAVIRCHENMCSKCNRQYVVLKKQEAIAVTQVSPTCQSVKLFADILF
VF*
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