prot_P-lacustris_contig1003.136.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1003.136.1
Unique Nameprot_P-lacustris_contig1003.136.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length196
Homology
[Close]
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match: D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.970e-44
Identity = 91/114 (79.82%), Postives = 95/114 (83.33%), Query Frame = 0 
Query:   51 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADARRRRHRHPEDPMGKEASESMQEVEMKRTVSLSNLHDTMEQQAALKEFYTFMDQVSRDGESGVKDAHLSVYSHALG 164
            SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPS+AD +    +   DPMGK+       VEMKRTVSL NLHDTMEQQ ALKEFYTFMDQ SR GESGVKDAHLSVYSHALG
Sbjct:   81 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSEADPQ---CKPSGDPMGKK-------VEMKRTVSLGNLHDTMEQQEALKEFYTFMDQASRVGESGVKDAHLSVYSHALG 184
[Close]
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match: A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.700e-17
Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0 
Query:   59 VDIGAVLGVDIGGTLSKLVYFEKKAPSKADARRRRHRHPEDPMGKEASESMQEVEMKRTVSLSNLHDTMEQQAALKEFYTFMDQVSRDGESGVKDAHLSVYSHALG 164
            VDIG VLG+DIGGTL+KLVYFEKK P     R        DP+          V MKR +SL +L+ T EQ+ AL +FYTFMD   + G++GV+D HL+ YSH LG
Sbjct:   77 VDIGGVLGMDIGGTLAKLVYFEKKEPPGGMVRTCSR----DPL----------VTMKRNLSLGDLN-TREQKEALMQFYTFMDTQEQFGKAGVRDEHLAYYSHELG 167
[Close]
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match: W7TXJ8_9STRA (Type II pantothenate kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.950e-7
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 0 
Query:   59 VDIGAVLGVDIGGTLSKLVYFEKKAPSKADAR---RRRHRHPEDPMGKEASESMQEVEMKRTVSLSNLHDTMEQQAALKEFYTFMDQVSRDGESGVKDAHLSVYSHALG 164
            VDIGA+ G+D+GGTLSKLVYFE+   S+   R   ++R  + + P  K          +KR+ SL NL  T     AL  FY F+        + ++D +L+ +S  LG
Sbjct:   64 VDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERMQQQKRRNYTDKPFQKST--------LKRSASLENL-STPRHTKALDAFYAFIQAEGSPVRAELRDDNLTFFSRVLG 163
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LL03_ECTSI3.970e-4479.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2M7_9STRA8.700e-1750.94Fumble-domain-containing protein n=1 Tax=Tribonema... [more]
W7TXJ8_9STRA8.950e-736.70Type II pantothenate kinase n=2 Tax=Monodopsidacea... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..195
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 65..95
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1003contigP-lacustris_contig1003:5189..8269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1003.136.1mRNA_P-lacustris_contig1003.136.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1003 3986..8269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1003.136.1 ID=prot_P-lacustris_contig1003.136.1|Name=mRNA_P-lacustris_contig1003.136.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=196bp
MYGQRWALGAIALLCGAGIALVGVRRRRRRRREGGGAHHNNDTRRVSENT
SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADARRRRHRHPEDP
MGKEASESMQEVEMKRTVSLSNLHDTMEQQAALKEFYTFMDQVSRDGESG
VKDAHLSVYSHALGECFTSSTTKQGLWTARWRQSATAPSTATYRF*
back to top