Homology
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI)
HSP 1 Score: 266 bits (681), Expect = 3.890e-80
Identity = 135/163 (82.82%), Postives = 144/163 (88.34%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPTEVEEAVPPHRAKAEDGDSYSSGGDEPGPDPRDSLRNRRMREMAEGSVKREYTFKVGRAIADEPATTAYPALVVSLGSG 980
GVLHFFH+ETRFMDRAVEAI NSPIHRNIQ LGCTGGGAFKFEE FLQRL VRMLQMDEMECLVRGMQFALANI +ACYTYRPP EV++ P +AE+G SGGDEPGPDPRD+LRN+RMREMAE S KREYT KVGR+IADEPATTAYPALVVSLGSG
Sbjct: 185 GVLHFFHFETRFMDRAVEAIANSPIHRNIQALGCTGGGAFKFEESFLQRLAVRMLQMDEMECLVRGMQFALANIPEACYTYRPPVEVKKEGAPSGGEAEEGGG--SGGDEPGPDPRDNLRNKRMREMAEVSAKREYTVKVGRSIADEPATTAYPALVVSLGSG 345
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA)
HSP 1 Score: 144 bits (362), Expect = 2.570e-34
Identity = 79/163 (48.47%), Postives = 105/163 (64.42%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPTEVEEAVPPHRAKAEDGDSYSSGGDEPGPDPRDSLRNRRMREMAEGSVKREYTFKVGRAIADEPATTAYPALVVSLGSG 980
G LHFF +ETR MD+A+E I +S IH +I+ LGCTGGGA+KFE+ F +R+G+RMLQMDEM LVRG+QF +ANI CY + P P + +G G +EP +D+ RN RMR M+E K +Y+ KV R+ + +YPALVVS+GSG
Sbjct: 168 GQLHFFRFETRLMDQAIELISSSTIHNSIKALGCTGGGAYKFEDFFQKRMGIRMLQMDEMASLVRGLQFCIANIPGECYAFEPE--------PVKGTGANG----KGEEEPMASEQDTFRNMRMRHMSELREKVDYSHKVHRSRTE--LLQSYPALVVSIGSG 316
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
W7TXJ8_9STRA (Type II pantothenate kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ8_9STRA)
HSP 1 Score: 107 bits (266), Expect = 4.220e-21
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPTEVEEAVP 767
G LHF +ETR+MDR VE + ++ +H +I +GCTGGGA+KF +LF +RLG+ + +MDE++CL+RG++F L ++ CYTY+P + +P
Sbjct: 164 GELHFMRFETRYMDRVVEIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGIVLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLSLPLP 255
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A7S2G7W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7W6_9STRA)
HSP 1 Score: 97.4 bits (241), Expect = 7.740e-20
Identity = 41/89 (46.07%), Postives = 64/89 (71.91%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPTEVEE 758
G LHF H++T+ MDR + I +H I LGCTGGG+FK+++ F ++LG++++ +DEME LVRG++F ++N+ CYTY+P E E+
Sbjct: 93 GKLHFLHFQTKDMDRVLRLIRQHQLHHTITRLGCTGGGSFKYKDTFEKQLGIQVVAIDEMEGLVRGLEFVVSNVVGECYTYKPCHEDED 181
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A7R9Y8Q7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q7_9STRA)
HSP 1 Score: 92.0 bits (227), Expect = 3.020e-16
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRP-PTEVEEAV 764
G+LHF +ET+ M+ A++ + +H NI + CTGGGA+K+ + QRL + + DEMECLVRG+QF L N+ D YTY+P P E EA
Sbjct: 229 GILHFIRFETQRMEGAMDFVAAHSLHLNITHIPCTGGGAYKYASVAKQRLEIEFDKHDEMECLVRGLQFVLDNVKDEVYTYKPSPAEQAEAA 320
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A7S4D8P4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8P4_HETAK)
HSP 1 Score: 90.1 bits (222), Expect = 1.080e-15
Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = 3
Query: 489 RGVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPTEVEEAVPPHRAKAEDGD-------SYSSGGDEPGPDPRDSLRNRRMR--------EMAEGSVKREYTFKVGRAIADEPATTAYPALVVSLGSG 980
RG LHF +ET M+ AVE I ++ +HR+++ +GCTGGGA KF LF +RL V + + DEM+CLVRG+QFA + +TY P + E A+ + + D D S SS + + L RR + + ++++Y K+ R + YP L+VS+G+G
Sbjct: 24 RGRLHFVSFETARMEDAVELIASNRLHRSVREMGCTGGGAHKFAGLFRERLAVGLRKHDEMDCLVRGLQFAGRAVVAEFFTYASP-DREPALRSRQPRMSDFDEETMSMDSSSSHTVQDAELKQKELERRREKIQXXXXXXKKLSKKLQKDYNLKIHRP---NTILSKYPYLIVSIGTG 198
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A7S2FXW4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FXW4_9STRA)
HSP 1 Score: 86.3 bits (212), Expect = 7.990e-15
Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPT 746
G L+F +ET+ +++ + +G ++R I LGCTGGG+FK+EE L + ++ +DEME LVRG++FA++N+ CYTY+P T
Sbjct: 65 GKLNFLLFETQHLEKVMALMGTHRLNRVILTLGCTGGGSFKYEEKLRNDLNIDIVSIDEMESLVRGLEFAISNVIGECYTYKPTT 149
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A7S2SKN7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKN7_9STRA)
HSP 1 Score: 85.9 bits (211), Expect = 2.470e-14
Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 3
Query: 492 GVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTYRPPTEVEEAVPPHRAK---AEDGDSYSSGGDEPGPDPRDSLRNRRMREMAEGSVKREYTFKVGR-AIADEPATTAYPALVVSLGSG 980
G++HF H+ T MDR ++ I + + + LGCTGGG+FK+++ ++LGV+++ +DEME LVRG++F ++ ++ CYTY+ E +E + + EDG DEP + V +T KV R A+A + +P L+VS+GSG
Sbjct: 171 GMIHFVHFATSDMDRVLQLIRSHKLAHAVLRLGCTGGGSFKYQKEIEEQLGVQVVAVDEMETLVRGIEFVVSTVAGECYTYK--LEGDEDAEEDKERDPLVEDGQGAE---DEP---------------TSAKKVSERWTAKVQRPAVALQDI---FPYLLVSIGSG 314
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
A0A8K1FHI1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHI1_PYTOL)
HSP 1 Score: 84.3 bits (207), Expect = 5.310e-14
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 3
Query: 381 GAASSTQG-VLHLHGPGVQGRGERCQGRPPQRVQPRPRGVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTY 734
G SS +G +L LH R + + V P G +HF ++T MD + + + HR I+ + CTGGGA+KF LF ++LG+ +L+ DEM+CL+RG+ F L + D C+T+
Sbjct: 84 GCLSSIEGYILSLHSKDRMRTAHREEHL--ELVVPHLGGTIHFCSFQTVKMDEITDFVRHRFFHRYIKHIACTGGGAYKFGRLFEEKLGIEILKEDEMDCLIRGLNFVLRHAKDECFTF 200
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Match:
W2P0D5_PHYPR (Pantothenate kinase n=12 Tax=Phytophthora TaxID=4783 RepID=W2P0D5_PHYPR)
HSP 1 Score: 81.6 bits (200), Expect = 5.040e-13
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 3
Query: 405 VLHLHGPGVQGRGERCQGRPPQRVQPRPRGVLHFFHYETRFMDRAVEAIGNSPIHRNIQVLGCTGGGAFKFEELFLQRLGVRMLQMDEMECLVRGMQFALANISDACYTY 734
++ LH R ER Q P+ G +HF ++ T MD + + HR I+ + CTGGGAFKF +LF RLG+ + + DEM+ L++G+ F L + + CYT+
Sbjct: 113 IMSLHATDEAQREERLQMFVPELG-----GTIHFINFPTSKMDEITDFVRRRFFHRYIKKIACTGGGAFKFSQLFESRLGIELHKADEMDALIQGLNFVLRHAPNECYTF 217
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1003.136.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.89e-80 / Id = 82.82 Expect = 2.57e-34 / Id = 48.47 Expect = 4.22e-21 / Id = 46.74 Expect = 7.74e-20 / Id = 46.07 Expect = 3.02e-16 / Id = 46.74 Expect = 1.08e-15 / Id = 34.64 Expect = 7.99e-15 / Id = 43.53 Expect = 2.47e-14 / Id = 33.53 Expect = 5.31e-14 / Id = 36.97 Expect = 5.04e-13 / Id = 36.36 Sequence D8LL03_ECTSI A0A835Z2M7_9STRA W7TXJ8_9STRA A0A7S2G7W6_9STRA A0A7R9Y8Q7_9STRA A0A7S4D8P4_HETAK A0A7S2FXW4_9STRA A0A7S2SKN7_9STRA A0A8K1FHI1_PYTOL W2P0D5_PHYPR
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 165.6
Seed ortholog evalue 2.3e-38
Seed eggNOG ortholog 2880.D8LL03
Preferred name PANK1
KEGG rclass RC00002,RC00017
KEGG ko ko:K09680,ko:K12648,ko:K19942
KEGG Reaction R02971,R03018,R04391
KEGG Pathway ko00770,ko01100,ko04621,ko04622,ko04623,ko05160,ko05161,ko05162,ko05164,ko05168,map00770,map01100,map04621,map04622,map04623,map05160,map05161,map05162,map05164,map05168
KEGG Module M00120
Hectar predicted targeting category signal peptide
GOs GO:0000003,GO:0000278,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005768,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007049,GO:0007059,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009314,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010212,GO:0010332,GO:0010564,GO:0010565,GO:0012505,GO:0015630,GO:0015936,GO:0015937,GO:0015939,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0030117,GO:0030118,GO:0030154,GO:0031323,GO:0031410,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045475,GO:0046390,GO:0046483,GO:0048232,GO:0048468,GO:0048475,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051302,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0055037,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0061024,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090207,GO:0090407,GO:0097708,GO:0098796,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1904251
EggNOG free text desc. pantothenate kinase activity
EggNOG OGs COG5146@1,KOG2201@2759
Ec32 ortholog description Type II pantothenate kinase
Ec32 ortholog Ec-11_006230.1
EC 2.7.1.33
COG Functional cat. H
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000,ko04131
Exons 4
Model size 1333
Cds size 588
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815270.185911-UTR-P-lacustris_contig1003:3985..4425 1622815270.185911-UTR-P-lacustris_contig1003:3985..4425 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 3986..4425 -
1693493441.087037-UTR-P-lacustris_contig1003:3985..4425 1693493441.087037-UTR-P-lacustris_contig1003:3985..4425 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 3986..4425 -
1622815270.1970074-UTR-P-lacustris_contig1003:4883..5188 1622815270.1970074-UTR-P-lacustris_contig1003:4883..5188 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 4884..5188 -
1693493441.0996923-UTR-P-lacustris_contig1003:4883..5188 1693493441.0996923-UTR-P-lacustris_contig1003:4883..5188 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 4884..5188 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815270.2102633-CDS-P-lacustris_contig1003:5188..5195 1622815270.2102633-CDS-P-lacustris_contig1003:5188..5195 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 5189..5195 -
1693493441.1097844-CDS-P-lacustris_contig1003:5188..5195 1693493441.1097844-CDS-P-lacustris_contig1003:5188..5195 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 5189..5195 -
1622815270.2204082-CDS-P-lacustris_contig1003:5657..5905 1622815270.2204082-CDS-P-lacustris_contig1003:5657..5905 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 5658..5905 -
1693493441.1225667-CDS-P-lacustris_contig1003:5657..5905 1693493441.1225667-CDS-P-lacustris_contig1003:5657..5905 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 5658..5905 -
1622815270.2329519-CDS-P-lacustris_contig1003:7936..8269 1622815270.2329519-CDS-P-lacustris_contig1003:7936..8269 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 7937..8269 -
1693493441.1328416-CDS-P-lacustris_contig1003:7936..8269 1693493441.1328416-CDS-P-lacustris_contig1003:7936..8269 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 7937..8269 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1003.136.1
>prot_P-lacustris_contig1003.136.1 ID=prot_P-lacustris_contig1003.136.1|Name=mRNA_P-lacustris_contig1003.136.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=196bp
MYGQRWALGAIALLCGAGIALVGVRRRRRRRREGGGAHHNNDTRRVSENT SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADARRRRHRHPEDP MGKEASESMQEVEMKRTVSLSNLHDTMEQQAALKEFYTFMDQVSRDGESG VKDAHLSVYSHALGECFTSSTTKQGLWTARWRQSATAPSTATYRF* back to top mRNA from alignment at P-lacustris_contig1003:3986..8269-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1003.136.1 ID=mRNA_P-lacustris_contig1003.136.1|Name=mRNA_P-lacustris_contig1003.136.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4284bp|location=Sequence derived from alignment at P-lacustris_contig1003:3986..8269- (Pleurocladia lacustris SAG_25_93)ATGTATGGCCAAAGATGGGCTTTGGGAGCAATAGCTCTGCTGTGTGGGGC
GGGTATCGCTCTCGTGGGGGTAAGGAGGCGAAGGCGACGGCGGCGGGAGG
GAGGCGGCGCTCATCACAACAATGACACACGCCGCGTGTCCGAAAACACC
AGTCTTTCAGACACGTACCCAGCTGTTGATATAGGGGCGGTGCTTGGCGT
GGATATTGGGGGCACGTTGTCGAAGCTGGTGTACTTCGAAAAGAAGGCAC
CTTCGAAGGCCGACGCCCGGCGGCGTAGACATCGACATCCAGAGGATCCC
ATGGGAAAGGAGGCGAGTGAGTCTATGCAAGAG GTGACACAACAGGAATG
TGGGTACATGGTAAAAAACATAAGTTACATACATACTCCAATACCACAGC
AGCAGCAGAAAGCGATTATTTATTCACGTCGTGAGTAAACACAATTCGAT
TGAATTCGACGAGGGAAAGGGACAGCTGAACCCTTCTCGCTATAAATTTT
TGTTGGGCATGTACCCCAGGAGGGCGGGTGGGGGCCACAGGGGAGGAACC
CTTTTGTGTGACCCGGCTGGGTGCCACCCTCCACATCGCCGAAAGGTGTA
AAGAGGCTCGCATCTAGAATACGATGGGACAAAAAAAAACAAAAAAAAAC
GGTCTATTCAATCGACCTTGTCGGGTCCGTCCCGCGTACATCTTCAGCCC
TCACACTTATATACCTAAACCGGGAGCGTAGGATTTACAACGTACTCTAC
TGTAGCAGCAAAGTTACCTTGAACCTTTGATTGTGTTGGTGTCACGGCCC
TTTTTGGCGTGCATATCGTGATGATCACGCCTGCACGGCTATGGAACCAA
GGCGTGTCGTGGAAATTCTCCGGTTCAACTCGTAGATCCAACACTGGCTG
CTACCAGGAAGGCTCCGTACTTGACAGGTGCAATATATTGTACTGGTTAC
ACCGGGTCTTTATGGGAACAAAATCTCTCTGCAAATCTTGTTTTTTTCTA
CCCTTTGGGCAGTCTGCCTCGCGAACGATTCTGAATCAGCTGTTCGGCCG
TCGGGAAAAGTCATCCAATCATTGGTGTGTCCACAGATTGCCTATTTGCT
CAGCATGGGTCTGGGTTTGAAATTTTTCAGCGGAGCAAGACTTGCGAGAA
TTTCCAAGATTTGTGGGAGAAGTGTCGCAAAAGCAAATGTTGGGCGCAAA
TTTCGCTTGGATTGAAAAATTCAAACCTAGACCCAGGCTGAGCAAATAGG
CGATCTGTGGACACACCAATGAACTGGATGACTTTTCCCGACGGCCGAAC
AGCTGATTCAGAATCGTTCCCGAGGCAGATTGCCCAAATGGTCGAAAAAA
ACAAGATTTGAGCGAATGAAGATTTGTTCCCATAAAGACCGGTCTTACAG
TGGTTTGAATTCTTGTTTTCCGCAAAACGCCGATTGATGACGTGATGGCC
CGCGGGATCGACTTGTGACAGTTCCGCGAAAACCCTGCGCCCGGGATGAA
TGCGTGCTGCCTCTAGAGTGATGTTCGTGGGAGTACATATGCATACATTA
AACGACAATTCTTCGCAGGTCGTCATGGTGTTGCGTTAATCACGAGGCTC
CACTGCTGGTATCTATGTTTGAGTTGACAAATTGTAATGGTAGTCTATCA
AACCACAAAACACGATCGTATTTGGCCTGCCGGTTTTATATTTCGCCTCT
TTTTTTTGTATCACCCGAGGTAGTCTGCGTAGATCCTGTGCAAAGGCGTA
TTTAGCCAAGAGCAATGCTGGAGTATTAGCTACCGGTTCGAGTTATGTAA
TCGTACCGGGGCGCCTCTAGCCTCTGCCAACAGTAGTATTGTCATAGCAG
CTCAAGCCGATGCGATTATATTCAGTATCGCGCCCCTCGGAGCACCGGGG
TGCGATCAACACAACTACAAAACTACCGGTCTCTGGCTGGCACATCTGGG
AGTTTTTTGTGATTGCAGCTTAGGTTAGGTGTGATCGATGAAAGTGAAAG
TGCGATCGATGAGAACGAAATGAAATGATTTCGGAATGATAATGATAATG
ATAATGATAATGTACCTAATGCTGCCAGTAACGACGGCTCGCAAACGAGG
CGGTAGCAACGAAAATGTCCAAGCTCTCTTCCTTTGACTCGTGTCCTGTC
TTCTTGGATCTATTCCTATGCCGCTCAATCTGTGCTGGAACACTGCACTG
CTTCTACTCTCGGATTGTGATTGTGATTGACTAGCCTGAAAGGGGGGCCT
TTCTGTCGTCAATTCAACCCGTTGATCTACTCACAGCTCTCCCTAGCCTT
TTTACTTGCCTGAATGCCCAGCCCATACTTGACCCGCGCTCTTTTCGCGT
GTTTGGCTCTTCAGGTGGAAATGAAGCGGACGGTTAGTTTGAGCAACCTA
CATGACACCATGGAGCAGCAAGCAGCACTCAAGGAGTTCTACACCTTCAT
GGACCAGGTGTCCAGGGACGGGGAGAGCGGTGTCAAGGACGCCCACCTCA
GCGTGTACAGCCACGCCCTCGGGGAGTGCTTCACTTCTTCCACTACGAAA
CAAGGTTTATGGACCGCGCGGTGGAGGCAATCGGCAACAGCCCCATCCAC
CGCAACATACAG GTGCAGATGTTGTTGGCGTATCCACCATTTGTTTTCCC
TGCCGGATGATCCTCAGGGTGCTCGTCATCACGTCAGCACTTCACGACGT
GTGCTTATTTTCTCGGGTTGTTTTTTGTTGGACTAGACTCAACTAAATGC
GAGCATTAGCGCCCATCGGCAGTATCGAAGGCCAATTTTTTCAGCACTGG
GTGCGAATTGCAGGTTGCCTGCCATGTTTCACGTGGTTGTGTGAGCTCAG
GCCAAAACGGGTCCAGTAAGAGAGCGTTCCTAAGCATACGTCCATGTACA
CGTTTCGAATTCCACAGCTAGCGTTCTCGACCCACCTCTCCACCAGCTTC
GCTGATGAGGATTCCGCCCTTGGTGCGGTACGGAAGCTTCATGGGTCATG
GTCACACAATTCTTTGCTTGTTCACGGCCGCGTCCCCGTGTTTCATCACC
GCGTTCTTATGTTCGTCGTCGTAGGTTCTAG GCTGCACCGGTGGCGGCGC
ATTTAAGTTCGAAGAATTGTTCCTGCAGAGGCTAGGGGTGCGAATGCTGC
AGATGGACGAGATGGAGTGCCTTGTGCGAGGGATGCAGTTCGCCCTCGCC
AACATTTCGGACGCCTGTTACACGTACCGACCGCCCACAGAGGTGGAGGA
AGCGGTCCCGCCGCATAGAGCGAAGGCGGAAGATGGGGATAGCTACAGCT
CAGGGGGGGACGAGCCCGGGCCGGACCCTCGCGATAGCCTCAGGAATAGG
AGGATGCGCGAGATGGCGGAAGGGTCAGTCAAAAGG GTGAGGTAAATGAG
CTGAGTCATTGTACTGCCTCATTTGACGACGTCTGACTGTGGTGAAGCGA
TCCCTTAGTTCTACTGACTTTAATTTTCGACTTTAATGTTACAATTTTTT
CGTGTATTGCCGTCACATGATGTTCTGCATGGTATCATACGGTGCCGCAT
GACGATAATTCTATTGCCATAGAGATCATTTGGACGTTCTTACGTAGTGG
AAGGTCACCGTCACACTTCGCCGTGGCGCCTTACAATGAATTTCACTTTT
TTCTACTGGTGCACCTTACTTCTGGTGAGGTGGCTGTCACTGCCACTGCA
GCGCCCGATCCATTTCTTCCCAAGATCGAACCGCTCGCCTGGTATCTGGT
ATATTCCAGCGCTTAGCCGCCACGGCATGTTGGCGCGTGCTTCTGGTCTT
CTGGTTTGGTTTTGTTTTCTGCTCTCGCGTGTCTATGCGCGCAGGAGTAC
ACGTTCAAGGTTGGTCGCGCGATTGCGGACGAACCGGCAACGACAGCCTA
TCCGGCACTTGTGGTGTCGTTAGGATCAGGGTTTCCATCATCAAGGTGGG
CATTTTGGTAATGCTCCACGGCGTTAGTCCGTCTTGCGAGCGACATCGCA
AATGTTGGAATGGTGCACAGTAGTAAATAGCCTTGAGTGCTTTGTCCCGA
AGTGGTGTTCTGGCATCTGTTCTACCGGGAGGAAGTTGAGGGCGATGCTA
TGCTGATGCTGATGTGTTTATGTCTACTACACCCTCACAACCCTCCAATG
TTGAGGTTAAATGTTTGCTTGTATCATCACCGTACTGACCATGTTTTTTT
GTTCTTTCTTTTCTTCTTTCTTCTGCTCGTCGGATTTTTTTGATGTTTTG
GCATTGCAATGGATGTATGCGCACTGTTCGCCGG back to top Coding sequence (CDS) from alignment at P-lacustris_contig1003:3986..8269-
>mRNA_P-lacustris_contig1003.136.1 ID=mRNA_P-lacustris_contig1003.136.1|Name=mRNA_P-lacustris_contig1003.136.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1176bp|location=Sequence derived from alignment at P-lacustris_contig1003:3986..8269- (Pleurocladia lacustris SAG_25_93) ATGTATGGCCAAAGATGGGCTTTGGGAGCAATAGCTCTGCTGTGTGGGGC GGGTATCGCTCTCGTGGGGGTAAGGAGGCGAAGGCGACGGCGGCGGGAGG GAGGCGGCGCTCATCACAACAATGACACACGCCGCGTGTCCGAAAACACC AGTCTTTCAGACACGTACCCAGCTGTTGATATAGGGGCGGTGCTTGGCGT GGATATTGGGGGCACGTTGTCGAAGCTGGTGTACTTCGAAAAGAAGGCAC CTTCGAAGGCCGACGCCCGGCGGCGTAGACATCGACATCCAGAGGATCCC ATGGGAAAGGAGGCGAGTGAGTCTATGCAAGAGATGTATGGCCAAAGATG GGCTTTGGGAGCAATAGCTCTGCTGTGTGGGGCGGGTATCGCTCTCGTGG GGGTAAGGAGGCGAAGGCGACGGCGGCGGGAGGGAGGCGGCGCTCATCAC AACAATGACACACGCCGCGTGTCCGAAAACACCAGTCTTTCAGACACGTA CCCAGCTGTTGATATAGGGGCGGTGCTTGGCGTGGATATTGGGGGCACGT TGTCGAAGCTGGTGTACTTCGAAAAGAAGGCACCTTCGAAGGCCGACGCC CGGCGGCGTAGACATCGACATCCAGAGGATCCCATGGGAAAGGAGGCGAG TGAGTCTATGCAAGAGGTGGAAATGAAGCGGACGGTTAGTTTGAGCAACC TACATGACACCATGGAGCAGCAAGCAGCACTCAAGGAGTTCTACACCTTC ATGGACCAGGTGTCCAGGGACGGGGAGAGCGGTGTCAAGGACGCCCACCT CAGCGTGTACAGCCACGCCCTCGGGGAGTGCTTCACTTCTTCCACTACGA AACAAGGTTTATGGACCGCGCGGTGGAGGCAATCGGCAACAGCCCCATCC ACCGCAACATACAGGTGGAAATGAAGCGGACGGTTAGTTTGAGCAACCTA CATGACACCATGGAGCAGCAAGCAGCACTCAAGGAGTTCTACACCTTCAT GGACCAGGTGTCCAGGGACGGGGAGAGCGGTGTCAAGGACGCCCACCTCA GCGTGTACAGCCACGCCCTCGGGGAGTGCTTCACTTCTTCCACTACGAAA CAAGGTTTATGGACCGCGCGGTGGAGGCAATCGGCAACAGCCCCATCCAC CGCAACATACAGGTTCTAGGTTCTAG back to top