mRNA_P-lacustris_contig975.16069.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: D7FJG4_ECTSI (Prefoldin subunit, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG4_ECTSI) HSP 1 Score: 199 bits (506), Expect = 2.850e-63 Identity = 113/147 (76.87%), Postives = 118/147 (80.27%), Query Frame = 1
Query: 1 MEESKVPRGALGEGGGQEMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKYXXXXXXXXXXXXXXXXRGDPQQQALQA 441
MEESK P GA G GGQE+NEQQIIG YR ML D NQMRRKISELEQEV+EHQMVVDTLEPLE TRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQ+LQQLAT+RANKEKEAAEWKIKY +G P QALQA
Sbjct: 1 MEESKAPGGAEGGVGGQELNEQQIIGTYRGMLGDVNQMRRKISELEQEVSEHQMVVDTLEPLEGTRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKIKYKIRSQQEAQAMSQA--QGIPTPQALQA 145
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A835YP58_9STRA (Putative prefoldin subunit (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP58_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.800e-29 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 55 MNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLE--ATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
+ EQQ+I Y+ +L D + +RRKI+ELEQE EH++V++TLE +E RRA+RLVGGVLVERTV +VLP+V+AN GIKQVL LAT KE+ AA WKIKY
Sbjct: 1 LTEQQVISHYKQLLGDCSAIRRKIAELEQESTEHELVMETLEKVEEKTKRRAFRLVGGVLVERTVADVLPSVQANHAGIKQVLGHLATDLRAKEEAAAAWKIKY 104
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: K3WSV0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSV0_GLOUD) HSP 1 Score: 107 bits (267), Expect = 2.120e-27 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 55 MNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
+ EQQ+I Y+AM + Q+ KI+ELE E EH+ V+ TL+ L ATR+AYR+VGGVLVERTV EVLP V +N++GI QVL QL S KE+ A EW+ KY
Sbjct: 5 ITEQQVIATYKAMRAEVRQLAEKIAELEVETTEHERVIQTLKDLPATRKAYRMVGGVLVERTVAEVLPAVTSNRDGIAQVLTQLNESIKQKEESANEWQRKY 106
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A5D6XZ09_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ09_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.090e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 46 GQEMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
G+ + EQQ++ Y+A+ ++ Q+ KI+ELE E+ EH+ V+ TL+ L R+AYR+VGGVLVERTV EVLP V AN++GI QVL QL S KEK A +W+ KY
Sbjct: 3 GEAITEQQVVATYKALRSEVRQLAEKIAELEVEIAEHERVLQTLQGLPGARKAYRMVGGVLVERTVAEVLPAVSANRDGIAQVLAQLGESLKQKEKSADDWQRKY 107
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A7S0CI05_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CI05_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.570e-27 Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 49 QEMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
Q ++E+ ++ Y+ + + NQ+ KI+ELE + NEH++V DTL+PLE TRRAYRLVGGVLVERTVGE+LP V N+E I+ VL L + K+KE ++WK KY
Sbjct: 35 QPIDEKTVLAKYKELQSSCNQLINKITELEFDRNEHRLVEDTLKPLETTRRAYRLVGGVLVERTVGEILPAVTTNKENIQMVLDNLQKNMEAKQKETSDWKAKY 138
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A3M6VHU8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHU8_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.860e-27 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 46 GQEMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
G+ + EQQ++ Y+++ + QM KI+ELE E EH V+ TL L R+AYR++GGVLVERTV EVLP VKAN++GI QVL+QL S +KEK A EW+ KY
Sbjct: 2 GEHITEQQVVATYKSLRAEVRQMGEKIAELEMETTEHDRVIQTLTELPNGRKAYRMIGGVLVERTVQEVLPAVKANRDGIAQVLKQLNESIKHKEKTADEWQQKY 106
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: UPI001C4B84E9 (probable prefoldin subunit 2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B84E9) HSP 1 Score: 105 bits (263), Expect = 2.240e-26 Identity = 52/103 (50.49%), Postives = 78/103 (75.73%), Query Frame = 1
Query: 52 EMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
+MNEQ I+ Y M T+ NQ+ KI+ELE EV+EH +V+ ++PL+ +RR YR+VGGVLVERT+ EVLP V+ N+EG+++V+ +L + K+KE AE+++KY
Sbjct: 13 QMNEQLILNTYANMRTEVNQIYSKITELEMEVSEHSLVIGAIQPLDPSRRCYRMVGGVLVERTINEVLPAVQRNKEGLEEVIARLNEALEKKKKEIAEFELKY 115
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A8K1CT28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT28_PYTOL) HSP 1 Score: 104 bits (259), Expect = 3.970e-26 Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 49 QEMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
Q++++QQII Y++M + QM KI+ELE E EH V+ TL+ L TR+A+R+VGGVLVERTV EVLP V N++G+KQVL+QL S KE A EW+ KY
Sbjct: 8 QQLSDQQIIAMYKSMRAEIRQMAEKIAELEVETTEHDRVIATLQGLPPTRKAFRMVGGVLVERTVQEVLPAVVTNRDGVKQVLEQLNESIKQKEASANEWQRKY 111
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A8J5EWR1_ZINOF (Uncharacterized protein n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5EWR1_ZINOF) HSP 1 Score: 105 bits (263), Expect = 6.190e-26 Identity = 52/103 (50.49%), Postives = 78/103 (75.73%), Query Frame = 1
Query: 52 EMNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
+MNEQ I+ Y M T+ NQ+ KI+ELE EV+EH +V+ ++PL+ +RR YR+VGGVLVERT+ EVLP V+ N+EG+++V+ +L + K+KE AE+++KY
Sbjct: 32 QMNEQLILNTYANMRTEVNQIYSKITELEMEVSEHSLVIGAIQPLDPSRRCYRMVGGVLVERTINEVLPAVQRNKEGLEEVIARLNEALEKKKKEIAEFELKY 134
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Match: A0A388LWS9_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LWS9_CHABU) HSP 1 Score: 103 bits (258), Expect = 1.170e-25 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 55 MNEQQIIGAYRAMLTDANQMRRKISELEQEVNEHQMVVDTLEPLEATRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQVLQQLATSRANKEKEAAEWKIKY 360
+NEQ +I + A+ + NQ+ +KI+ELE E+NEH +V+ +EP+E +RR YRL+GGVLVERTV EVLP V N EG+K+V+ +L K KE AE+++KY
Sbjct: 9 VNEQAVISRFGALRNEVNQLWQKITELEMEMNEHNLVIGAIEPMEPSRRCYRLIGGVLVERTVAEVLPAVTRNCEGLKEVIGKLGEQLQKKRKELAEFQMKY 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig975.16069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig975.16069.1 >prot_P-lacustris_contig975.16069.1 ID=prot_P-lacustris_contig975.16069.1|Name=mRNA_P-lacustris_contig975.16069.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=148bp MEESKVPRGALGEGGGQEMNEQQIIGAYRAMLTDANQMRRKISELEQEVNback to top mRNA from alignment at P-lacustris_contig975:61201..62850+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig975.16069.1 ID=mRNA_P-lacustris_contig975.16069.1|Name=mRNA_P-lacustris_contig975.16069.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1650bp|location=Sequence derived from alignment at P-lacustris_contig975:61201..62850+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig975:61201..62850+ >mRNA_P-lacustris_contig975.16069.1 ID=mRNA_P-lacustris_contig975.16069.1|Name=mRNA_P-lacustris_contig975.16069.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=888bp|location=Sequence derived from alignment at P-lacustris_contig975:61201..62850+ (Pleurocladia lacustris SAG_25_93)back to top |