mRNA_P-lacustris_contig1113.941.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE) HSP 1 Score: 633 bits (1633), Expect = 1.630e-191 Identity = 342/477 (71.70%), Postives = 377/477 (79.04%), Query Frame = 3
Query: 3582 SSPSPCT-IWKIRRPDGTAYPHNQINAAAAALDAAADYEEDEAENQDR-RRGHPQDEGGDRIDGETGGRMTRLLGETEEAGNGHVSRVSYPGGGRAVAKADAVNAAPLAAPAPQVEGNGV-VSRALATNGGVGHXXXXXXXWHGRDYGRVEV-GGIGMSAVVGAIGLAAVALVVAVMNGLFGLGNTSPSPEPLPPSPPMQAQVYLLGWDGRRRSEVAAATEDIDILFYPPPSGSSLEPMPHRFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVLEDNGQTMLKGS 5000
++PSPCT +W +RRPDGT YPH+Q++AAAAAL A +EA NQD ++G PQD GD G T GE GNG VS SYPGGGRA++ D AP A Q E +GV V R LA +GGVG WH + Y + G+GM VGAIGLAAVA V ++ GLFG+G TS PE PS PMQAQV LLGWDGRR SE AATEDID LFYPPPSGSSL PMPHRFLLAESMDVAKAWARWE TL+WRKET+AD ILD+PHPKFALIKSKYAHCFHLPDK GRVTYYERPGMS+IAELKRLGITK+ELL+HYVYCME+LW+VLQPRQSQRITIVIDL GV+FRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVAN+G+EMLKVIPSEHLP HYGG G+ ALG SP ELAMLAHV+KVL +NGQ+M K S
Sbjct: 1140 AAPSPCTSVWDLRRPDGTEYPHDQLSAAAAALAAP-----EEANNQDNWQQGSPQD--GDGAGGTTRSEAAHPRGE---GGNGRVSPASYPGGGRAISAEDTAITAPQTAAGHQAEADGVGVRRTLAGDGGVG------GGWHAQGYAQEGADAGVGMDPWVGAIGLAAVAFAVVLVKGLFGIGGTSSPPETPSPSGPMQAQVVLLGWDGRRMSEATAATEDIDNLFYPPPSGSSLAPMPHRFLLAESMDVAKAWARWEATLDWRKETEADTILDRPHPKFALIKSKYAHCFHLPDKDGRVTYYERPGMSDIAELKRLGITKSELLDHYVYCMEFLWKVLQPRQSQRITIVIDLAGVRFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANVGDEMLKVIPSEHLPLHYGGAGEVALGSSPQELAMLAHVEKVLAENGQSMQKAS 1600
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A835YPD3_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD3_9STRA) HSP 1 Score: 258 bits (659), Expect = 6.170e-74 Identity = 121/241 (50.21%), Postives = 167/241 (69.29%), Query Frame = 3
Query: 4275 LEPMPHRFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVK--FRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVLEDNGQTML 4991
L PMP RFL+AE D KA ARW TT+EWR+ D D++L +PHP+F LIK Y CFHLPD G + YYE PG N+A LK G+ + +L HY YCME+LW+ LQPR+ ++TIV D EG+K +++L GE+ +FLK++V M+S HYP RSFKI+ILNAPS N + +K ++ + T+ KI ++P + + E+L++IP E+LPP YGGT LG+SPAE+++ AHV L+ ML
Sbjct: 29 LPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDML 269
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A7S3XQ11_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ11_HETAK) HSP 1 Score: 207 bits (527), Expect = 2.940e-56 Identity = 105/235 (44.68%), Postives = 150/235 (63.83%), Query Frame = 3
Query: 4284 MPHRFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVLEDNGQTM 4988
+P F+ AE + A A R+ TL WR E AD ILD+PH KF + K Y H F+ D+ G V Y E+ G ++ ++R G++ +LL HY+Y MEYLW L P ++ R+T V+DLEGV+ RD GE AF+K+++GM S HYPQR K+ I+NAPS+F+ V+ VKP++ E T+KKI +L + +EM+KVI + +P YGG+G A+ +SP E A V V E G+T+
Sbjct: 31 VPQLFVEAEFGNRAAALDRYRKTLLWRWEVGADRILDEPHLKFDIFKKCYPHSFYGRDREGNVVYIEQAGRVDVEGMRRHGLSLDDLLRHYMYNMEYLWGRLSPGKADRMTAVLDLEGVRLRDFAGEVAAFVKSAIGMNSTHYPQRGHKVFIINAPSWFSMVYKAVKPLIPEVTRKKISILD-SRFYDEMVKVIDPDQIPQEYGGSGAHAMADSPFEQQYRAFVTAVAEKTGKTL 264
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A7S2AKR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKR7_9STRA) HSP 1 Score: 198 bits (504), Expect = 9.800e-52 Identity = 98/235 (41.70%), Postives = 143/235 (60.85%), Query Frame = 3
Query: 4266 GSSLEPMPHRFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESL-AFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVL 4967
G+ PMP RFL AE+ D KA RW T WR+E A+ LDKPHP FAL+K+ Y H +H D+ G + YYE PG +I LK GIT + ++H +Y E+LW+ LQP + R+T VIDL GV + ++L + +K V HYP+RS+KI++LN P++F ++F VKP+LN+ K KI++ + MLK+I +++P YGG+ + LG EL + HV + +
Sbjct: 123 GTKTPPMPTRFLNAEAGDEVKATQRWLDTCRWREEHGAEEALDKPHPDFALLKNCYPHFYHGRDREGNIVYYECPGGLDIDRLKTAGITCEKFVDHVMYQQEFLWRKLQPSEEDRVTAVIDLGGVNSMFIFNKALISIVKACVVTTGAHYPERSYKILVLNVPNWFGTLFGFVKPLLNDVQKAKINIFRQHEVHSGMLKIIDDDNIPTAYGGSSPDELGNWEGELTLTTHVLETM 357
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A4D9D3L4_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3L4_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.310e-49 Identity = 113/256 (44.14%), Postives = 148/256 (57.81%), Query Frame = 3
Query: 4254 PPPSGSSLEP--------MPHRFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGE-EMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQ----KVLEDNGQ 4982
PPP ++L P +P FL AE D KA ARW T WR D IL +PHPKF+LIK Y FH DK G V +YE G + EL R G++ ++L EH + E+LW VLQP QS R+T+V+DL+GV D+ GE + K +VG+ S HYP RS + +IL P +FN +F VKPMLNE T+KKI L + + ML+ I SE LP YGG + LGESP E+ + + V K +D G+
Sbjct: 836 PPPDAAALSPAGLPSPASVPPTFLEAEKGDEVKARARWARTQAWRASHQVDQILAQPHPKFSLIKRHYPQAFHFRDKEGHVCFYELLGRLQVGELLRQGVSLSDLTEHVILQQEFLWGVLQPEQSDRVTLVLDLKGVSLADVTGEVVNVAKMAVGLTSTHYPARSCRTLILFVPGWFNLIFRFVKPMLNEDTRKKIVFLDEGAVRQGAMLEYIDSEFLPKEYGGKCEVPLGESPFEIQLRSIVAAAGIKAEDDGGE 1091
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: G4YXA9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXA9_PHYSP) HSP 1 Score: 194 bits (494), Expect = 1.070e-47 Identity = 97/225 (43.11%), Postives = 141/225 (62.67%), Query Frame = 3
Query: 4293 RFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVL 4967
RF+ E DV K AR+E TL+WRKE D D+IL PHP F +IK Y FH + G YYERPG ++ LKR G++ +LL HY+Y EYLW+V++P S R V+D+ G+ DL GE L F+K + HYP+RS I I+N P +FN ++ +VKP+++ T++K+ +L + + +E+ +I E++P +GG G ALG+S E A+ AHV+K L
Sbjct: 484 RFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGGGGA-ALGDSEEEHALAAHVKKYL 707
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A3R6Z8R0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z8R0_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.570e-47 Identity = 95/229 (41.48%), Postives = 144/229 (62.88%), Query Frame = 3
Query: 4293 RFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVLEDNG 4979
RF+ AE +V K AR+E+TL+WR+E + D +L +P P F LIK Y FH G YYE+ G ++ +K G+T +LL HYVY EY+W +L+P S R V+D+ G+ F DL G+ L F++ + G +S +YP+RS +I I+N P++FN V+++V PM++ TK+KI + + EE+LK I + LP YGG+ + LGES E+A+ +V +VL +G
Sbjct: 321 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGGSSVK-LGESDEEVALAKYVDQVLAASG 548
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A024UU13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU13_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.400e-46 Identity = 94/229 (41.05%), Postives = 143/229 (62.45%), Query Frame = 3
Query: 4293 RFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVLEDNG 4979
RF+ AE +V K AR+E+TL+WR+E + D +L +P P F LIK Y FH G YYE+ G ++ +K G+T +LL HYVY EY+W +L+P S R V+D+ G+ F DL G+ L F++ + G +S +YP+RS +I I+N P++FN V+++V PM++ TK+KI + + EE+LK I + LP YGG+ + LGES E+A+ +V + L +G
Sbjct: 477 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGGSSVK-LGESDEEVALAKYVDQALAASG 704
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A7S0C1G9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1G9_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.520e-45 Identity = 94/240 (39.17%), Postives = 135/240 (56.25%), Query Frame = 3
Query: 4287 PHRFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLG--------EEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVLEDNGQ 4982
P RFLLA D W R+ TL WR E + D IL +PH F LIK Y H FHL YYE+P N+ ELK GIT LL HY + E++WQV++P + +IDL+G+ RD +GE + F++ + S+HYP+RS I + NAP +FN++++++KP+L+ T KI +LP + G E++ I ++PP YGG LG+SP E + V K E +G+
Sbjct: 191 PKRFLLAAKNDPVLGWKRYRDTLAWRYERNMDTILSEPHFHFQLIKEHYPHYFHLRGYNNEPVYYEKPARMNLKELKAAGITMDILLRHYSFVTEFMWQVIEPCDGSKNIYIIDLDGITIRDFMGEVIKFVRKASSFTSQHYPERSGSIFVFNAPIWFNTIWSIIKPILDPVTLTKIRILPKSKKGMQGKQQMFNELVTRIDPRNIPPEYGGYSMP-LGQSPEEQMLQDLVLKNQERHGK 429
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A6G0WJQ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJQ7_9STRA) HSP 1 Score: 186 bits (473), Expect = 4.800e-45 Identity = 90/225 (40.00%), Postives = 137/225 (60.89%), Query Frame = 3
Query: 4293 RFLLAESMDVAKAWARWETTLEWRKETDADHILDKPHPKFALIKSKYAHCFHLPDKGGRVTYYERPGMSNIAELKRLGITKAELLEHYVYCMEYLWQVLQPRQSQRITIVIDLEGVKFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANLGEEMLKVIPSEHLPPHYGGTGQEALGESPAELAMLAHVQKVL 4967
RF+ AE D K AR+E TL+WR+E D +L +P P F LIK Y FH G+ YYE+ G ++ +K G+T EL+ HY++ EY+W +L+P S R V+D+EG+ F D G+ + F++ ++G + HYP+RS +I I+N PS+FN ++ ++ PM++ TK+KI + + +E+LK I + LP YGG G ALG S E+A+ HV +L
Sbjct: 476 RFIAAEKGDEVKGRARFEKTLQWRRENRVDGLLYEPQPHFHLIKRNYPQYFHGKSIKGQCVYYEKVGKIDLKAMKAAGLTMDELMRHYIFLTEYMWTLLEPSDSGRSVTVLDVEGIGFYDFTGDVMDFVRQAMGFVGAHYPERSAQIFIVNVPSWFNMLWKVISPMIDPVTKEKIRICKGKAVKDELLKSIAEDQLPSDYGG-GSVALGHSKEEIALAKHVDDIL 699 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1113.941.1 >prot_P-lacustris_contig1113.941.1 ID=prot_P-lacustris_contig1113.941.1|Name=mRNA_P-lacustris_contig1113.941.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=441bp MVESEQPRWMAGDCYAVPAAPPSELKYGDRLRLWARPSLPTGHHPRLPGGback to top mRNA from alignment at P-lacustris_contig1113:33200..55005- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1113.941.1 ID=mRNA_P-lacustris_contig1113.941.1|Name=mRNA_P-lacustris_contig1113.941.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=21806bp|location=Sequence derived from alignment at P-lacustris_contig1113:33200..55005- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1113:33200..55005- >mRNA_P-lacustris_contig1113.941.1 ID=mRNA_P-lacustris_contig1113.941.1|Name=mRNA_P-lacustris_contig1113.941.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2646bp|location=Sequence derived from alignment at P-lacustris_contig1113:33200..55005- (Pleurocladia lacustris SAG_25_93)back to top |