prot_P-lacustris_contig1113.941.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1113.941.1
Unique Nameprot_P-lacustris_contig1113.941.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length441
Homology
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BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 2.200e-110
Identity = 224/404 (55.45%), Postives = 272/404 (67.33%), Query Frame = 0 
Query:   17 VPAAPPSELKYGDRLRLWARPSLPTGHHPRLPGGSDISLDVVEDKRREQDMRGTGDDGAISSPEVMLGAGGGGYVGSLEKVQRVSTKLLRRSDLAVIGLSEGKNSAGFTGCHFKAVDPDNKKQDGDVVRHGDVILLVDDNNNVWNENGHFLPGLLKLKPRGSKREIAVTFKPSVADRKVDSDKLLPPVVFGPQGLQLITVDSGNK------RRTSSRKHFHALTAFSKKSTGNSNASAVAGTFLCSDGRREPIVFDVHLPNASPVGDPSPVVTKVTIHVEEKEQPRHHQWDSRLPEQLPDLQKV-----PSDTTTASLSIATADGSNSGARNGTGVAGIT----------SFRPKALVTTRFKVGRKLKPAYKRRNSQSHKRPGSMSTGIDHSRRRRSERGIRV 399
            VPAA P ELKYGDRLRL AR       H R  GGSDIS+  +            G+ GA    E  +G GGGG+VGSLEKVQ+VSTKL RR+++AVI  SEG N+AGFT CHFKAVDP+NKK+DGD+VR+GDVI LVDD N VW++NGH LPG L++K RGSKR+IAV+FKP +A  K+D++  LP VVF   GLQ++TV+ G+K      RRTS+RK+FHALTAFSKK++GN    +V G FLC+DGR E +VF+VHLPN SP+GDPSPVVTKVT+HV+EK  PR H   S L   LP   KV     PS+  TA LS   ADGS +G   G+  +GI             RPK++V+    VGRKLK A+KRR+S S KRP S S G  HSR   S RG  V
Sbjct:  520 VPAAQPPELKYGDRLRLKARV------HHRPSGGSDISVGAL------------GEGGAGPPAESAVG-GGGGFVGSLEKVQKVSTKLFRRNEVAVISQSEGNNAAGFTSCHFKAVDPENKKKDGDIVRYGDVIFLVDDRNYVWSDNGHLLPGSLRMKSRGSKRQIAVSFKPFLAPLKLDANNELPAVVFSTHGLQIMTVEYGSKDQNIKKRRTSTRKNFHALTAFSKKNSGN---PSVNGAFLCADGRGEGVVFEVHLPNESPIGDPSPVVTKVTVHVDEK--PRLHDKMSYL---LPLSTKVHEAHWPSEALTAPLSCVAADGSGTG--QGSSASGIRLEDGISQGSEKPRPKSMVSKVLPVGRKLKKAHKRRSSLSQKRPKSASVG--HSRSATSGRGFMV 892
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1113.941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI30_9PHAE2.200e-11055.45CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1113contigP-lacustris_contig1113:46379..50105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1113.941.1mRNA_P-lacustris_contig1113.941.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1113 33200..55005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1113.941.1 ID=prot_P-lacustris_contig1113.941.1|Name=mRNA_P-lacustris_contig1113.941.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=441bp
MVESEQPRWMAGDCYAVPAAPPSELKYGDRLRLWARPSLPTGHHPRLPGG
SDISLDVVEDKRREQDMRGTGDDGAISSPEVMLGAGGGGYVGSLEKVQRV
STKLLRRSDLAVIGLSEGKNSAGFTGCHFKAVDPDNKKQDGDVVRHGDVI
LLVDDNNNVWNENGHFLPGLLKLKPRGSKREIAVTFKPSVADRKVDSDKL
LPPVVFGPQGLQLITVDSGNKRRTSSRKHFHALTAFSKKSTGNSNASAVA
GTFLCSDGRREPIVFDVHLPNASPVGDPSPVVTKVTIHVEEKEQPRHHQW
DSRLPEQLPDLQKVPSDTTTASLSIATADGSNSGARNGTGVAGITSFRPK
ALVTTRFKVGRKLKPAYKRRNSQSHKRPGSMSTGIDHSRRRRSERGIRVE
PVFSLARWSGTLSDPFGIFSRSCGRRRRAASLRGRGFPVG*
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