mRNA_P-lacustris_contig1039.395.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: D7FUR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR1_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 5.700e-130 Identity = 393/939 (41.85%), Postives = 487/939 (51.86%), Query Frame = 3
Query: 192 LVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLR-SLPDLRELDLDGNPCSRSQGYRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGNKAMRAAEPEVTEPGAGELVDL-GHLPSGKAQLLRSDRLNNDPQLLCYLAQAVLASPCDSPRDAIEALRQKA---HTPSLRKPCGAAEARQAQGEEG---EGATVEREEEEESVLRGTGLRREK---------------------------GAER*KEQRR--RLSRRTTPKTGSQTGGEEGLCRARKQRAEEGEESKNRCLKIPHEIWSRKTFPLSRRPRPTSIHRTHTRQ*ESCSSLWKTFSSNALAETTRMSARAKRGFRH------DSRQENGNDRDKTDTASWTNIGGIDNDGDDDVKDRKISSSAPRRXXXXXXXXXXXXXXXXXXENGEAYPFFDPMIREDLRRLRLENRNMYLLLAENRELKAQAQEEAANAQAVQRELRAEVGRVKGKLKEVVGELEVARRXXXXXXXXXXXXXXXXXXVVAHEATVPSRSRGRDSK-IIPSSDVSTSPT--TTASAFST----GTNGGXXXXXXXEGS---SYD-----------MDWRKKTIGSGMTVHPTTWSNKPAENHVQIS-GMAMVIHGRKGDIAQQQASLEEE--------LGGDDDGSDEGDKELEELFRKNERTIQEIRRDLKLLECGGKRRIEDDXXXXXXXXXXXXXXXXXXXXXXXXRRLPETRENLGGGAGTPKAGPGEQVYSWKSP--AILSGNGDPPCQRWAGGVRTSAKKKDVRPSTSNSKLRGGNKVPTSEPPSVSELLLQLQ--DNCGASFCRTTAVRSSDAG 2777
LVNLVEVN NFNAITSL GLVCPNL+RLYLS+NLIAST+ S+PKLRTLCLFKN+LPNLASALEPLR SL DLRELDLDGNPCSRS+GY+HRVIRCC RLRELDGEELGQLDRDLS LFFEEQR+ A WDR+G +DD GS+RH R PATAP T + RR AR + +G EN ++L E + + AA + GEL+D G LP GK QLLRSDRLN DPQLL YLAQ VLA PC SPRDA+E+LR+KA T + R+ AAE + EE EG V EE+ G G GA + R + R +P + EG + E S R L+ E+ T PL P P + + + L K L + R ++ D R+ +G D T + T D K S R XXXX G +P+ RE+LRRLRLENRNM+LLL ENRELK Q +EE ANA+ VQRELR ++GRV+GKL EV GELE AR V EAT+ SRSRG DS IIP+S++S+SPT T SAF T G +GG G SY+ +DWR++ + P+ + + HV + GM G + A QQ SLEE+ DDG D GDKELEELFR+NERT+Q+IR DLKLL+ + +E ++ E ++ L G GT + G GEQ+ S ++P A+L G + QR G ++ ++P R + P SEPPSVSELLLQL+ DN +S + AVR S+ G
Sbjct: 39 LVNLVEVNVNFNAITSLHGLVCPNLRRLYLSNNLIASTERFTVSYPKLRTLCLFKNMLPNLASALEPLRRSLADLRELDLDGNPCSRSRGYKHRVIRCCPRLRELDGEELGQLDRDLSDLFFEEQRNNAVWDRMGGVNDDGEGSSRHCR--PATAPATTVSRRWARSKG--NNPSGAARENPKLLEEDGEDLGAALQGSLK--LGELMDFAGCLPPGKTQLLRSDRLNKDPQLLSYLAQGVLADPCGSPRDAVESLRRKALARSTETRRRATAAAEQPLGEAEEEGIREGGKVPEEEKGFEETGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAVGAVQGDSGRNGPTIRARRSPPDTRRVHSSEGPTKE-----EALPTSPARNLQPQDELPP--TLPLPPPPLPPANGLDPSDPYATIRKLLKLVEILQLELARDDNNTEDRRYQEGAFLCGDLRKRSGRYADGDTTTTTT----------DHAKGENAFFSDKRPGNPRTRDSTVICDGXXXXXXG--FPYLGATGREELRRLRLENRNMHLLLVENRELKTQIREETANAELVQRELRDKLGRVEGKLDEVTGELEAAR------GRLLLLPPAVAPATVTEEATISSRSRGGDSNTIIPTSELSSSPTIATMDSAFGTDVSVGDDGGGGSDGTGRGGGGCSYNSGGTGRSRVTPLDWRRRPEKAVCPTMPS--KDDLGQKHVTATKGMVTATKGME-QRAAQQGSLEEQRHDYYSDDATNSDDG-DGGDKELEELFRRNERTMQQIRCDLKLLQSDKEIELEHHNTNNASSNASSDDSDNKGEL-----QVHEKQQPLKAGGGTAETGVGEQLPSRRTPTQALLLGGDN--SQRREGIIQIPGSM--LQPPQGEVWERN-RRYPCSEPPSVSELLLQLRHDDNVRSS---SPAVRCSEDG 929
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A6H5LCV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCV0_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 2.740e-121 Identity = 387/962 (40.23%), Postives = 474/962 (49.27%), Query Frame = 3
Query: 192 LVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRSQGYRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGNKAMRAAEPEVTEPGAGELVDLGHLPSGKAQLLRSDRLNNDPQ-------------------------LLCYLAQ--AVLASPCDSPRDAIEALRQKA---HTPSLRKPCGAAEARQAQGEEG---EGATVEREEE--EESVLRG-------------------------TGLRREKGAER*KEQRRRLSRRTTPKTGSQTGGEEGLCRARKQRAEEGEESKN----RCLKIPHEIWSRKTFPLSRRPRPTSIHRTHTRQ*ESCSSLWKTFSSNALAETTRMSARAKRGFRHDSRQENG-----------NDRDKTDTASWTNIGGIDNDGDDDVKDRKISSSAPRRXXXXXXXXXXXXXXXXXXENGEAYPFFDPMIREDLRRLRLENRNMYLLLAENRELKAQAQEEAANAQAVQRELRAEVGRVKGKLKEVVGELEVARRXXXXXXXXXXXXXXXXXXVVAHEATVPSRSRGRDSKIIPSSDVSTSPT--TTASAFSTGTN-----GGXXXXXXXEGSSYD-----------MDWRKKTIGSGMTVHPTTWSNKPAENHVQIS-GMAMVIHGRKGDIAQQQASLEEELGGDDDGS----DEGDKELEELFRKNERTIQEIRRDLKLLECGGKRRIEDDXXXXXXXXXXXXXXXXXXXXXXXXRRLPETRENLGGGAGTPKAGPGEQVYSWKSPAILSGNGDPPCQRWAGGVRTSAKKKDVRPSTSNSKLRGGNKVPTSEPPSVSELLLQLQ--DNCGASFCRTTAVRSSDAG 2777
LVNLVEVN NFNAITSLRGLVCPNL+RLYLS+N IAST+ L S+PKLRTLCLFKN+LPNLASALEPLR L DLRELDLDGNPCSRS+GY+HRVIRCC RLRELDGEELGQLDRDLS LFFEEQR+K WDR+G DDDR GS+R R RPATAP T + RR A+R +G EN+++L E + + AA P GEL+D LP GK QLLRSDRLNNDPQ L C L + VLA PC SPRDA+E+LR+KA T + R+ AE + EEG EGA V EE+ EE G T + KG + + G + AR+ + E ++ R L+ E P T + + C L L E ++ D R + G D DT + T D K S R X +PF RE+LRRLRLENRNMYLLL ENRELK Q Q EAANA+ VQRELR ++GRV+GKL EV GELE AR EAT+ SRG DS IP+S++S+ PT TT SAF T + GG G S++ +DWR++ + P+ + + HV + GM G + AQQ + E+ DD + D GD+ELEELFR+NERT+QEIR DLKLL+ + +ED+ XXXXXXXXXXX + R+ G A T G G++ K P G QR GG++ K ++P R + P EPPSVSELLLQL+ DN +S AVR + G
Sbjct: 103 LVNLVEVNVNFNAITSLRGLVCPNLRRLYLSNNFIASTERLTVSYPKLRTLCLFKNMLPNLASALEPLRRLSDLRELDLDGNPCSRSRGYKHRVIRCCPRLRELDGEELGQLDRDLSDLFFEEQRNKVMWDRMGGVDDDREGSSR--RHRPATAPATAVSRRWAQRKG--NHPSGAARENSKLLEEDAEDLGAALQ--GSPKLGELMDFACLPPGKTQLLRSDRLNNDPQARSYPLFVAKHPADRRQAYGGSRVLLRCALDRNFGVLADPCGSPRDAVESLRRKALARSTETRRRATTVAEQPLGEAEEGGTREGAKVPEEEKGFEERGREGXXXXXXXXXXXXXXXXXXXXXXXXETVVGAVKG--------------DSARNGPTSRARRSPPDARRVHSSEVPTKEDALPTRNLQPQDEPPPSLPLXXXXXPPATGLDPSDPYTTIRCCLLC---GCEVLVEILQLELARDDNNTEDRRYQEGAVLCGDLRKRSGDYADGDTTTTTT---------DHAKGENAFFSDKR--PGNPRTRDSTVICDGGXXXXXXFPFLGATSREELRRLRLENRNMYLLLVENRELKTQIQVEAANAELVQRELRDKLGRVEGKLDEVTGELEAAR-------GRLLLLPQPAVATAMEEATI---SRGSDSNTIPTSELSSCPTIATTDSAFGTDVSVGDGGGGSDGTGRGGGCSHNSGGTDRSRVTPLDWRRRPEKAVCPTMPS--EDDLGQKHVTATNGMVTTTKGMERRAAQQGSLEEQRHDSSDDATNSDGDGGDEELEELFRRNERTMQEIRCDLKLLQSDNEIELEDNNTNXXXXXXXXXXXYGDNRQQPKSHGEQQPRKAGGDSAET---GVGDRFPPLKMPPQALFRGGDNSQRRTGGIQIPEPK--LQPPQGKVWERDRSYHPCLEPPSVSELLLQLRHDDNVRSS----PAVRCGEDG 1009
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A835YU35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU35_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.230e-29 Identity = 74/163 (45.40%), Postives = 100/163 (61.35%), Query Frame = 3
Query: 183 LPALVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRSQGYRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLR 671
L LV L+++N NFN++ SL+GL CP L+RLYLS+N + S + A+ P+L TLCL+ N L + A+AL PLR LP LRELDLDGNPC + YRH +R RL LDGE + LD DLS L+F E+ + + + ++RP+TAP R
Sbjct: 96 LSPLVALLDLNLNFNSVFSLQGLACPGLRRLYLSNNRLTSVAGVAAALPRLTTLCLYSNYLADRAAALAPLRQLPRLRELDLDGNPCCAAASYRHHAVRALPRLTLLDGEPVTPLDLDLSALYFAERGASV------------VEGGGYPQQRPSTAPAAAFR 246
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: W2RD13_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2RD13_PHYPN) HSP 1 Score: 122 bits (307), Expect = 4.030e-25 Identity = 85/238 (35.71%), Postives = 120/238 (50.42%), Query Frame = 3
Query: 192 LVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRS-QGYRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGNKAMRAAEPEVTEPGAGELVDLGHLPSGKAQLLRSDRLNNDPQLLCYLAQ 902
LVNL+E+N NFN I L L C L++L++++N I L P+L TL ++ N + +L SAL RSLP LR LDL GNPCSR +GY+ RV++ SRL+ LDG+ + QLD++L+ FF A+ R + ++ AR P TAP +R ++ A PE T + +P G +L R D LNN+P LL YL+Q
Sbjct: 76 LVNLIELNVNFNQIERLDNLQCSGLEKLFIANNKIVDISPL-RKLPELNTLSVYGNCITDLDSALHTCRSLPRLRSLDLGGNPCSRDVEGYKFRVVKALSRLKMLDGDHITQLDKELTEEFF------ASMHRGSKQRNNGFIGAR-----PFTAPAAGVR----------------------------GSLAATIPETTVSNGTDPFASNLMPRGNVRLFRDDFLNNNPILLEYLSQ 273
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A225WYD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYD8_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.780e-23 Identity = 82/237 (34.60%), Postives = 118/237 (49.79%), Query Frame = 3
Query: 195 VNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRSQG-YRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGNKAMRAAEPEVTEPGAGELVDLGHLPSGKAQLLRSDRLNNDPQLLCYLAQ 902
VNL+E+N NFN I +L L C L++L++++N + L +L T+ ++ N + +L SAL R LP LR LDL GNPCSR G Y+ RV+R SRL LDG+++ QLD+DL+ FF ++ + G +G+ RP TAP GAR ++ A +P+ P + +P G +L R D LNN P LL Y+AQ
Sbjct: 56 VNLIEINLNFNQIETLDNLQCAGLEKLFIANNQVVDMSPL-RKLLRLNTISVYGNRIADLDSALHTCRGLPKLRSLDLGGNPCSRDVGEYKFRVVRALSRLDTLDGDQITQLDKDLTEEFFASIHKRSRQNSNGF-----IGT------RPFTAPAA-----GAR-----------------------GSLTAVKPDTKMPNDVDPFASNLMPRGNVRLFRDDFLNNSPILLEYMAQ 252
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A067CW58_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CW58_SAPPC) HSP 1 Score: 110 bits (274), Expect = 3.210e-21 Identity = 60/116 (51.72%), Postives = 78/116 (67.24%), Query Frame = 3
Query: 192 LVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRSQGYRHRVIRCCSRLRELDGEELGQLDRDL 539
LVNLVE+N NFN +TSL L C LQ+LY ++N IAS L A FPKL + +F N + +L +AL + L L+ +DLDGNPC+R GY++ V+R RLR LDG+ L LDRDL
Sbjct: 67 LVNLVELNINFNQVTSLESLQCFGLQKLYAANNCIASLAPLRA-FPKLSHISVFGNAILDLDAALHTCKHLLKLKSIDLDGNPCARLHGYKYHVLRALPRLRALDGDVLQALDRDL 181
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: T0RWJ6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWJ6_SAPDV) HSP 1 Score: 108 bits (271), Expect = 6.890e-21 Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 3
Query: 192 LVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRSQGYRHRVIRCCSRLRELDGEELGQLDRDL 539
LVNLVE+N NFN +TSL L C LQ+LY ++N IAS L A FPKL + +F N + +L +AL + L L+ +DLDGNPC+R GY++ V+R RLR LDG+ + LDRDL
Sbjct: 67 LVNLVELNINFNQVTSLESLQCFGLQKLYAANNCIASLAPLRA-FPKLSHISIFGNAILDLDAALHTCKHLLKLKSIDLDGNPCARLPGYKYHVLRALPRLRALDGDVVQALDRDL 181
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: D0NFX6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFX6_PHYIT) HSP 1 Score: 107 bits (266), Expect = 3.810e-20 Identity = 82/244 (33.61%), Postives = 114/244 (46.72%), Query Frame = 3
Query: 192 LVNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRSQ-GYRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGNKAMRAAEPEVTEPGAGELVDLGHLPSGKAQLLRSDRLNNDPQLLCYLAQAVLASP 920
LVNL+E+N NFN I L L C L++L+++++ + L KL TL ++ N + +L SAL RSLP L+ LDL GNPCS GY+ RV+R SRL++LDG+ + QLD+DL+ FF A G +G+ RP TAP +R G+ M P G +L R D LNN+P LL YL+Q ++P
Sbjct: 69 LVNLIELNVNFNQIERLDSLQCSGLEKLFIANSQVVDISPL-RKLLKLNTLSVYGNRITDLDSALHTCRSLPRLQSLDLGGNPCSHDVVGYKFRVVRALSRLKKLDGDHITQLDKDLTEEFFATMHKSARPSINGF-----IGA------RPFTAPAAGVR--------------------------GSSLM---------------------PRGNVRLFRDDFLNNNPILLEYLSQDAGSAP 253
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A024G8H6_9STRA (Uncharacterized protein n=9 Tax=Albugo candida TaxID=65357 RepID=A0A024G8H6_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.090e-19 Identity = 86/259 (33.20%), Postives = 121/259 (46.72%), Query Frame = 3
Query: 195 VNLVEVNANFNAITSLRGLVCPNLQRLYLSSN-LIASTDTLPA-SFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSR--------SQG---YRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRR-PATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGNKAMRAAEPEVTEPGAGELVDLGHLPSGKAQLLRSDRLNNDPQLLCYLAQAVLASPCDS 929
VNL+E+N NFN I+SL L C L++L+++ N + TD P SF KL TLC+F N L NL S L R+LP L+ LD+ NP +R S+G Y+ +IR RLRELDG+ + +LD+DL+ DE+ + LG + P P T GNK + +A+ P A + +P G +L R + LNN P LL YLA++ S +S
Sbjct: 105 VNLIELNLNFNRISSLDPLKCTQLEKLFVAHNEFLQITDLSPIRSFSKLTTLCVFGNQLSNLESVLHVCRALPKLQSLDIGDNPSTRQNARNPEESKGATRYKFTIIRNLPRLRELDGDSITRLDKDLA-----------------DEEVEMLGECDNNESSIPPPRPIT-----------------------------GNKCLASAQ--TRNPSAFDPFSSEEMPQGNVRLFRDEYLNNHPILLGYLAKSADGSVDES 315
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A8K1CGM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM6_PYTOL) HSP 1 Score: 89.4 bits (220), Expect = 1.710e-14 Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 3
Query: 195 VNLVEVNANFNAITSLRGLVCPNLQRLYLSSNLIASTDTLPASFPKLRTLCLFKNILPNLASALEPLRSLPDLRELDLDGNPCSRS-QGYRHRVIRCCSRLRELDGEELGQLDRDLSVLFFEEQRSKAAWDRVGDEDDDRLGSARHGRRRPATAPTTFLRRRGARRTQPPLDQAGRENENAEVLREGN-KAMRAAEPEVTEPGAGELVDLGHLPSGKAQLLRSDRLNNDPQLLCYLAQ 902
+NLVE+N NFN ITSL L CP L++ + N++ +L +L R LP LR LDL GNPCS+ QGY+ +V+R SRL+ LDGE++ QLD++L+ + A GR PATA ++ + R+G + R E T + H+P G +L R D LN +P LL YLAQ
Sbjct: 127 INLVELNLNFNQITSLDYLQCPALEKXXXXXXXXXXXXXXXXXXXXXXX-XXYGNLIADLEESLYTCRGLPKLRSLDLGGNPCSQELQGYKFQVVRMLSRLKTLDGEQVTQLDKELAEDY-----------------------ALQGR--PATA----------------------DSRPSTASRDGRAQTPRLWEAPSTPSKPFDPFQSKHMPKGNVRLFRDDFLNTNPILLEYLAQ 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1039.395.1 >prot_P-lacustris_contig1039.395.1 ID=prot_P-lacustris_contig1039.395.1|Name=mRNA_P-lacustris_contig1039.395.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=509bp MSARAKRGFRHDSRQENGNDRDKTDTASWTNIGGIDNDGDDDVKDRKISSback to top mRNA from alignment at P-lacustris_contig1039:54175..61070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1039.395.1 ID=mRNA_P-lacustris_contig1039.395.1|Name=mRNA_P-lacustris_contig1039.395.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6896bp|location=Sequence derived from alignment at P-lacustris_contig1039:54175..61070+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1039:54175..61070+ >mRNA_P-lacustris_contig1039.395.1 ID=mRNA_P-lacustris_contig1039.395.1|Name=mRNA_P-lacustris_contig1039.395.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3054bp|location=Sequence derived from alignment at P-lacustris_contig1039:54175..61070+ (Pleurocladia lacustris SAG_25_93)back to top |