prot_P-lacustris_contig1039.395.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1039.395.1
Unique Nameprot_P-lacustris_contig1039.395.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length509
Homology
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: D7FUR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR1_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.090e-39
Identity = 163/415 (39.28%), Postives = 214/415 (51.57%), Query Frame = 0
Query:   78 AYPFFDPMIREDLRRLRLENRNMYLLLAENRELKAQAQEEAANAQAVQRELRAEVGRVKGKLKEVVGELEVARRXXXXXXXXXXXXXXXXXXVVAHEATVPSRSRGRDSK-IIPSSDVSTSPT--TTASAFST----GTNGGXXXXXXXEGS---SYD-----------MDWRKKTIGSGMTVHPTTWSNKPAENHVQIS-GMAMVIHGRKGDIAQQQASLEEE--------LGGDDDGSDEGDKELEELFRKNERTIQEIRRDLKLLECGGKRRIEDDXXXXXXXXXXXXXXXXXXXXXXXXRRLPETRENLGGGAGTPKAGPGEQVYSWKSP--AILSGNGDPPCQRWAGGVRTSAKKKDVRPSTSNSKLRGGNKVPTSEPPSVSELLLQLQ--DNCGASFCRTTAVRSSDAG 458
             +P+     RE+LRRLRLENRNM+LLL ENRELK Q +EE ANA+ VQRELR ++GRV+GKL EV GELE AR                    V  EAT+ SRSRG DS  IIP+S++S+SPT  T  SAF T    G +GG        G    SY+           +DWR++   +     P+   +   + HV  + GM     G +   A QQ SLEE+            DDG D GDKELEELFR+NERT+Q+IR DLKLL+   +  +E                           ++ E ++ L  G GT + G GEQ+ S ++P  A+L G  +   QR  G ++       ++P       R   + P SEPPSVSELLLQL+  DN  +S   + AVR S+ G
Sbjct:  538 GFPYLGATGREELRRLRLENRNMHLLLVENRELKTQIREETANAELVQRELRDKLGRVEGKLDEVTGELEAAR------GRLLLLPPAVAPATVTEEATISSRSRGGDSNTIIPTSELSSSPTIATMDSAFGTDVSVGDDGGGGSDGTGRGGGGCSYNSGGTGRSRVTPLDWRRRPEKAVCPTMPS--KDDLGQKHVTATKGMVTATKGME-QRAAQQGSLEEQRHDYYSDDATNSDDG-DGGDKELEELFRRNERTMQQIRCDLKLLQSDKEIELEHHNTNNASSNASSDDSDNKGEL-----QVHEKQQPLKAGGGTAETGVGEQLPSRRTPTQALLLGGDN--SQRREGIIQIPGSM--LQPPQGEVWERN-RRYPCSEPPSVSELLLQLRHDDNVRSS---SPAVRCSEDG 929          
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Match: A0A6H5LCV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCV0_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 4.720e-37
Identity = 163/405 (40.25%), Postives = 208/405 (51.36%), Query Frame = 0
Query:   79 YPFFDPMIREDLRRLRLENRNMYLLLAENRELKAQAQEEAANAQAVQRELRAEVGRVKGKLKEVVGELEVARRXXXXXXXXXXXXXXXXXXVVAHEATVPSRSRGRDSKIIPSSDVSTSPT--TTASAFSTGTN-----GGXXXXXXXEGSSYD-----------MDWRKKTIGSGMTVHPTTWSNKPAENHVQIS-GMAMVIHGRKGDIAQQQASLEEELGGDDDGS----DEGDKELEELFRKNERTIQEIRRDLKLLECGGKRRIEDDXXXXXXXXXXXXXXXXXXXXXXXXRRLPETRENLGGGAGTPKAGPGEQVYSWKSPAILSGNGDPPCQRWAGGVRTSAKKKDVRPSTSNSKLRGGNKVPTSEPPSVSELLLQLQ--DNCGASFCRTTAVRSSDAG 458
            +PF     RE+LRRLRLENRNMYLLL ENRELK Q Q EAANA+ VQRELR ++GRV+GKL EV GELE AR                       EAT+   SRG DS  IP+S++S+ PT  TT SAF T  +     GG        G S++           +DWR++   +     P+   +   + HV  + GM     G +   AQQ +  E+     DD +    D GD+ELEELFR+NERT+QEIR DLKLL+   +  +ED+   XXXXXXXXXXX              + R+  G  A T   G G++    K P      G    QR  GG++    K  ++P       R  +  P  EPPSVSELLLQL+  DN  +S     AVR  + G
Sbjct:  626 FPFLGATSREELRRLRLENRNMYLLLVENRELKTQIQVEAANAELVQRELRDKLGRVEGKLDEVTGELEAAR-------GRLLLLPQPAVATAMEEATI---SRGSDSNTIPTSELSSCPTIATTDSAFGTDVSVGDGGGGSDGTGRGGGCSHNSGGTDRSRVTPLDWRRRPEKAVCPTMPS--EDDLGQKHVTATNGMVTTTKGMERRAAQQGSLEEQRHDSSDDATNSDGDGGDEELEELFRRNERTMQEIRCDLKLLQSDNEIELEDNNTNXXXXXXXXXXXYGDNRQQPKSHGEQQPRKAGGDSAET---GVGDRFPPLKMPPQALFRGGDNSQRRTGGIQIPEPK--LQPPQGKVWERDRSYHPCLEPPSVSELLLQLRHDDNVRSS----PAVRCGEDG 1009          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1039.395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUR1_ECTSI2.090e-3939.28Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5LCV0_9PHAE4.720e-3740.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1039contigP-lacustris_contig1039:59334..61029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1039.395.1mRNA_P-lacustris_contig1039.395.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1039 54175..61070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1039.395.1 ID=prot_P-lacustris_contig1039.395.1|Name=mRNA_P-lacustris_contig1039.395.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=509bp
MSARAKRGFRHDSRQENGNDRDKTDTASWTNIGGIDNDGDDDVKDRKISS
SAPRRRPRNRSRARASRNDGDDDENGEAYPFFDPMIREDLRRLRLENRNM
YLLLAENRELKAQAQEEAANAQAVQRELRAEVGRVKGKLKEVVGELEVAR
RRLLLLQQAPAAAAAATTAVVAHEATVPSRSRGRDSKIIPSSDVSTSPTT
TASAFSTGTNGGGSDGPGSEGSSYDMDWRKKTIGSGMTVHPTTWSNKPAE
NHVQISGMAMVIHGRKGDIAQQQASLEEELGGDDDGSDEGDKELEELFRK
NERTIQEIRRDLKLLECGGKRRIEDDDHNNTNTNNNTNNNNTNTNDDDDD
RRLPETRENLGGGAGTPKAGPGEQVYSWKSPAILSGNGDPPCQRWAGGVR
TSAKKKDVRPSTSNSKLRGGNKVPTSEPPSVSELLLQLQDNCGASFCRTT
AVRSSDAGSHGRQLFARREGSKGVSELEELDEEGEQAGTRTSGEETGAVG
RAPTRRVG*
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