mRNA_P-lacustris_contig1014.228.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1014.228.1

>prot_P-lacustris_contig1014.228.1 ID=prot_P-lacustris_contig1014.228.1|Name=mRNA_P-lacustris_contig1014.228.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=292bp
MTLTKAMSFDVVRFFCQPRVTEFASAETAVNLSKGDALEHPVTELEAVRS
ILVQGLPLLDQELTETSLVQVFSAYGEISKLLLQTIEGSRSQRAVLVFAE
AAGANAALQANGRDILGANCTVSLASSMPMLSDGLDRDDVSDQPNAPAGK
MTTAEWIKSIFARGMVYTRLFDERLGVSQTAKSIAVKVQTQVERLDEKHN
VSGKIAAVALGAQAKVQEVNTTLKVTETATKWAKTAKESTDKALESNPRV
AAGVQRAGDAFETVVRSVSGLAQQALGQPKPSGPAAPAEVP*
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mRNA from alignment at P-lacustris_contig1014:35051..42331+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1014.228.1 ID=mRNA_P-lacustris_contig1014.228.1|Name=mRNA_P-lacustris_contig1014.228.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7281bp|location=Sequence derived from alignment at P-lacustris_contig1014:35051..42331+ (Pleurocladia lacustris SAG_25_93)
ACCGAGTACGTTTTTACATAAGCATCTCTGATAAGCGCATAGCTCTAGCA
TCGCAATTTTACATGTATACATGTAAAGGGACTGACCTGACGGCTGGGGG
GTTGAACGGCAACCACCAGCAATATCTGCCGTTCTTCGGGGTTGTTCGGA
AAAACCCAGGTTCTCAATGACCCTCACAAAGGCAATGAGTTTTGATGTCG
TCCGTTTTTTTTGTCAACCGCGTGTGACAGAATTCGCGTCGGCAGAAACG
GCCGTGAACCTCAGCAAAGGCGACGCTTTGGAGCACCCCGTCACAGAGCT
CGAAGCCGTCCGCTCCATCCTGGTGCAGGGGCTCCCGCTGCTTGATCAAG
AGCTGACGGAGACTTCCCTCGTGCAGGTAAACGTCAATGTGAACCACAGC
TATATTCATACCTCTCTTGGTGTCTTCAACATGTTCATGGCTCCTTCAAC
GGTAATAACAATTTGCCAGCGTTTCTGAAGCCCTTCTGGAGAGGTTTCAG
CTTCCGTTGCGGCTAACAAGTCCCTACAATGGGTTCTTGATCCTCAATTT
CTTGACCCAAACGATTTGCTCGTGTCGCACGCAACGTACCTCCACGCCGT
CGCGGAGGTGCTTCCGCAGACACGCAGAGACGACCTCTTCAATCGACAAG
CTCTGTCCGCGGGCCACCGTCTCTTTGTTCCCGTCTCTATGATAGAAGCT
ACTCATTCGTGGGGTACACCGTCTCTGAAAGACCCACCCCATAAGACACT
ATCATCATTTCACAAAGCCTGCATTTCCGAGAAATGTGTTGTACAGATTT
TGTGGACACTTGAATACCCCGATGAAGCCTGCACTCACCTAGAGATTGAT
GTGAATCTGTCATGCAGATCTTGAGATAATCGCGCTTTTTTTTTTTTTCA
TCCCAGCTATTCTGGATGCGAGCTTTCTTTACACCTTCGGCGGTATGGAG
GGTGGCACCCAGCCGGGGTCACACAGAAGGGTTCCTCTCCTGAGGCCCCC
ACCCGCCCTCCTGCGGTACTGCTGTACATGCCTAATCGCGAGAAGGATTC
AGCTATCCCTTTCCCTCGTCGAATTGAATCGAATTGTGTTTTACTCACGA
TAACAAGTAAAACAAGCGGCAGGTGTCATTTTTACCTTCACCGTGAAGAC
TCGGACCATGAACCACCTGCAAGGGACATCTCAGATGGTAGTCTTCCTTG
GAGTTTTGTGTGTTATCTTGAATTGCGTCTCTTCCTCGGGCACTGGGGGT
GGTGCGGGCTGCAAAAAATGTTTTCAACAATCTGCCACGCAAAGAATGTC
CCTTTCTTTCCAGCACACGCCCCATCACGAAATATGTATCTTCCTGTGTA
GTGCGATGCTTTGATGCCTCTCTCTCTCTCTCGCTCTCTGTCTGTCTCAA
CGTGTGACCAGCAGAAGCGAGATGCGAAAAATTGTGACGTTCTGTGAGTA
CAGGCAACGACGCGATAATTGGTAGAGACAGCGAGGGTGCACATAAGTTC
GGCGTAGCAGCAGCCGTCTAGATTTCGGCACCTTTCGCATGCAGCTGCTG
CCCAGATGCCAGTACCGCTGCTCTTCTGCGCATCCTGTTCGCAACCAGCC
TCTCGCGGCGGTGCTGTTTTTCTTGTAGTAAAGAAAAGTGGACATGAGGT
GTTTTTTTCAGGGAGTTAGAGGTATGCCACACTGCTGCGTAGCCCATGAC
TCTTCCAGCGCGTGCATGTATATGCCATAGGCATCGCGGAACTTGTTTTT
TACCAATGTATGAATGTGATTCGTTGGGGACGGGGGAGGGGGACGCATGC
CTCCACACCAAGGCGCGTTCAAGGGATCACTATTATTTCCACCAGGAAAG
GAAACGGAGATTGATAGTCCGCACCACTGCAGAATCGCACCTTGTGCAAG
CGCCTATATCATTTACTCCGAGTACTACAATATCGTGCAGGCTTTGGGTA
TGTAGGCAAGACGGTTTCAGAGTCTGGAATCGGCGCTGCGCTGCTGGTTG
CGGTTCGCCCAAACCTCTCCGATCTGTGGCTGCTTGTGTGTGTATCGTCC
TCAGGTGTTCTCGGCGTACGGCGAAATCTCGAAGCTGCTCCTGCAAACGA
TCGAAGGGAGTGAGTCTTTTAATCGTTATCGACGAATATGAATGCCCATA
ACCGCGAGGAATGCGGCTTCTTCGTTAGGAAAATGTAGTCCCCTCGCAGT
AAGGAAACAAAGCACCGTTTGCGACGCTGCCAGACACCGTTGTGGGAGTC
AACGCTCTCGGGCGTAGTTGATGCTACCATGTATGCATAGCATGCCGCCA
AATAGCGCTGCTGCTGTGCAGTGACTTGTGCGAAGTCCAGCAGGCAGTGC
CGCGCTTCCACGAGAACCGCCGTTCTGACCACTTTGTCGCTCCGCGATTT
CTGTTTCCCCAGCAGAAAAGCGCTTTCGCCAGATGCACTTTTCGCTCACC
ACGGTGCGCTATTCACCAAGTTGGCAGAGCGGACTGTCCTTTCCTCGCGG
CACGTTGGCACGGCGATTCGTTGGCATGCTTGACGGTGGACGACAGGCCG
TTCGCTATCTGTGTAACATGCCCGTATCATGAGTGTTTTTCGCTTGCTGT
GTGCGATACTGATATGCGTCAATGCCCTTCGAACCCGACGCTCGATCTCT
TGGATGCAGGCAGATCGCAGAGGGCTGTCCTGGTATTCGCCGAAGCGGCC
GGTGCTAACGCTGCTCTGCAGGTGCGACGAGCGATGGCTCCGCCGTGTGC
GCTATTTTGGAACCTGCACTAGCTTACGACTTCAGTCGGATGAAATCCGG
CTCGAAAGAGTACCAGTGTCCGGCGCAGAACTCAGCCCCCGGATGCTCTT
CCACGATGGGTGCTTCGAATAGCGTGCACTCGTGCACTTCCTTGAGCCCA
GCAGGCAGCATGACGGCGGTGTATGGCCCCGAGCAGTGCTTGGCGCAATA
CACCGCCGTCATGCTGCCTGCCTTTCCACAACTCGGCTCTTGCGTGCTTA
CATGGGCACACCGCTCGCTAACGACGTTGACCATGCCCTCGATCGCGTGC
TTGGCACATACATCGCCGTTGTTGCTGCCTGCCCTTTCCCATAGCTCTGC
CACATCGTGCGGCTTACTGGGCACACTGTTTGCTGGCGACGTTCGCCATG
TCCTCATTCGCAGACTTCGCGCAAGACACAAGCGCCTTTCTCTCTGTCAT
GAGCGCACACTGTAGCATTCCCGCGAAAAAAGTGGAAACGGCGCGTTCAA
CCGCTGTACCGCCAACAACCTTGCTCGAAATATGAAACTGAATTTTGCCA
TCAACCCCAAAACCTATACTGTACTGTATATATTACGCATTTGTCGTCGA
AGGCTGCTTCTGATGTTTTTCGGCTTGAATATCAAGCTGATGCGACCCTA
CCCAATGAGCGCGACTTGTGTGACGTTGCCTCCGTCACCGTCTCTTCTTG
TTCTTGTACGAAACTAACATACCCCCCTCTATTCGAGCATGAAGGAGTCA
ATAGACAAGGTAACCGATTTCCCTGCCGCTGCTTTCTTGCGCTACTGCTG
GTGGTTTGTGTGGTGTTTTGTTGCTTTGCTGTGCGTTTGCCGCCCAGGCG
AACGGGCGCGACATCCTTGGCGCGAACTGCACCGTCAGCTTGGCGTCGTC
CATGCCGATGTTGAGTGACGGGTTGGACCGCGATGACGTCAGCGATCAGC
CTAACGCTCCTGGTGAGACCTCATCCTCCCTACTCTGCCATCTACAGCAG
TGCTGAACATATGCAACTATTCGCCCCACGGCCTTTGTTTGCAGTCTAGG
TTTGGGGCGATCCAGACGCGTTTGAGAGGTTGCCTTGCCGAGGCGCCTAT
GAATCGCCGTGGTCGTTGCCCTCAGAAGCAAAATGGAGCAGAAGGTTGAG
TGTCGCATTTCGACGCCGCACGCCCTTATTGTGCGCTTCGTGTCTTTCGC
TGAACATTCGTTCGACTACCCTAGGGACGAGGGGCACCGAGGCGCTATCT
CTGGGGTCGCCTTTGGCTTCAAATATGCGTTTTCCGTGTGAGGGGGACGT
TCGCGCCGCATTTGCTCATTCATCGGCGTTCTCGCATTTTGTAGCATGCT
GGCGAGCGGAGTTGGTTGGCGATTTTTTGTGTCGACTTTGACGCCGCTCT
TTGTTGTTCCTTTCCTCGATTTTTTGTTTTTTGCGGTTCGGTTCGTCATT
TGCCGCGAACGGGTGAACTCGAAGCCGGCAAAATGACCACGGCGGAGTGG
ATCAAGAGCATTTTCGCGCGGGGCATGGTCTACACGCGCTTGTTCGACGA
GAGGCTCGGCGTCTCTCAGACCGCTAAAAGCATAGCAGTAAAGGTGGGCA
CTATTTGAAGCGCTGGCTGCAGCTTCGTCGATAAGGCGGCTGCGGGAACT
TCTTGTGTTTGAGAGAGTCCCGAGCTTCGATGGGTTTGCTCTTTCTCTAA
GGGCTATCGTGGCGCTTGTCGAATTGCCGACAGTCTCCCATGTAACTCAA
GCATAGCGGAAATATTAGTCGGGCCTCTGGTTAACTATTTTATTCGGCTT
TTGTTTTATGTTTTACTGGCTAGGTGTGGTTTGTCTCAGGTAGGCAGATT
TCTCGTTGCTGAGTATCGACAGGGTACAGCAGGCCCGACTCCCACACTGC
GGTCCTACTCGCTTGCAAGGATTTTTTTTTTTTGTATTGAAAGCCAAGGA
ATACGTCTCATATCCTACTGTGATGTGTCTCTCCGGCCGGGCCCAGGTCC
AAACTCAGGTGGAGCGGTTAGACGAGAAGCACAACGTCAGCGGCAAAATT
GCTGCGGTTGCCTTGGGCGCGCAGGCGAAGGTACAAGAGGTCAACACCAC
GTGAGTCACCAACTTCCACTATTTCACTCGCCTCAGCGCTTGACAATGCC
AGGGGAGCTTCGCACTTTTTTGCCATCCGAGCCGGCGGCCGGTTTGACTA
GGCGCAGCCTTTTGGGTGGTAGCAGCCTCGACCCTTCGACCGAGTGGTCA
GCCGGACCTGAAAAGCGACCGCAAGTGTCGGTTGGATTACGCATCCGTGT
CGCTCGTTGCCTTGGGTACAGGCGGTGACCATAGAACCTTGAGCGTCGAC
ACATTTTGTCTCATGGCTTGTTCACCGTTTTATGCCTGGGGTTGCCCTGG
GTTACAGGCTCAAGGTGACGGAGACTGCGACGAAGTGGGCGAAGACCGCC
AAAGAGTCAACGGACAAGGTATGTTGTTGGTGTTGGTGTTGCTCCTCCCC
CGATCGCATTCCAGCCACAGTGCTGGATTCAGTTCGGGCTCTGCTCTGAA
GCATCTCGGACCGTCTTCGGGAGGCTTAGAACCGGGGTCGCGGAAAGGCG
TCGACCGGCGGATTGGATTGGATAGACGAGACCACTCCCCACGCTTCTCT
CAGCCATTGCAGCTGGATCGATTAGGGTGTGTGTGAGGGTGTCTCGCGTT
TTGTGAAGGTGTAGAACAGAACACGATTGTCCCCGTGGCATGCGGTAACT
TGAGCGTATCGAGTCGTCCTGGCGTGCGACTAGCTTGCTCCCAAAGAACC
CTTGTAGACACGTGCGAGCCCACCTCGACGGTATCACGTGCGCTCCAGGC
CTTATTTGTGTGGGGCATGTGCTTGTCATGTAGTTTCAAAGAGTTCCCAA
GGCACTGCTAGTCGCCAAGATTGCTGTCCATGCTTTGACCAAGTACACAC
GTGCATATGCCTCACAACTGTTTTCAAGATGAAGACGAGACCAGCTGCAA
CTCCGCGACGTACCCGCTGCCGCATCCTACGGTCTCCTCCGCAGGCTCTC
GAGAGCAACCCTCGCGTTGCCGCCGGCGTGCAACGAGCAGGAGATGCCTT
CGAAACTGTGGTGCGAAGCGTCAGTGGATTAGCGCAGCAGGCCCTGGGCC
AGCCGAAGCCCTCGGGTCCTGCAGCCCCGGCCGAAGTGCCGTGAACCAAG
CCTGCTTAGCTCTTCCTATTTTTTTCATTTTTTCTATTTTTTTTCTGGAG
GATGGAAACTCGATCGAATGTCCATCGAGGTTATCGCGCGAATCGAGGTT
ATCGCGCGAGCGTCGATAATCCCAAACAGTTGTGGATTCGTGGTTGATGT
CAATGCGGCGGTCGACGTTTTCCTTCTTCTGCTTTGAGATCGAAGGTGGA
TCGGCATCGGCATCGCAACCCTTGTCCCATTTTTTCTTCCATAAACGCAA
ATGCGGACCACGATGGCATTCATCCACTCTGACCGCGCGGATGTGATGGC
GTGGCGAGAAAACAACAAAATGTCGTTCCTCGATTCAGCCGAGCGGAATA
ACAACAGAGAGCGAAGTCGGTTTGCGGCTGGATTACGGTCGCGGCGAGAA
GGTGGTTGGTTGCCTTGGGGTTGGGTGCGTCAAGTAATGATGCTCGTTTT
GGGCAGGGGACTCTTGGGGCAGATTTTTCGGCGCGCTGGATGGAAAGTTG
TTGATTTCGGCCTGCGTTGACGGGAGGTTGGGTTTCGACACAAGCACGTT
CCCTGTGCTTGAACCTAAGCACTGCATGATGGCGGTTTGTCGCCGCTTTT
TGGAGGAGGGGGTGTTGGGAAGGAAGGCGGCCGCTCGCCCGCCTCCTCGT
GTGTTGAAAGTGTAAATATGGTGCCCGTGTATATAAGACTGCCGTAGATG
GTTTTTGACGTGATATGTTGTTGCAGAGATCGCTTGTGCCAACGGGAGAT
CGGACGCCATTGTTGACCTCACCTGTGTCCGCCCACGAATGACACAGGCA
GTGCAGATAACCGCCCGGGCTCGAAGTTCGCAAATCACGCTGCAGATTGA
GATGGCCAATAATCAGTCCATCGGATCATGAGTATAGTCTCCTCTGAGCA
AGTTTGCTTGCGAGGAAATGCTGATGGTCTTGAACCACTCCAAAATGCAA
CGGATGGTTCACCCCACCGTTGGAGGCGGGCCGATGTGAACCAATCCATT
GTTCACCACCAAAACGCTCGTGGACAACAGTTATTTTCGGGCTCTCGACC
GGAGGTCGATCCTATCTAGCAGCTCCTGCTCCCGACGCCGGATTGCTTCG
TCCCTCTTTCGTTGGAGCGCCAGCTGCCTCTGCGCCTCGGCAGCCTTCTC
TTCTCTCCGGTGTGCCTCTCGAATCCGTTCCTTACACCTTCGACTATCAG
CGTAGTGCAGAGCGTCTCGCCCTCTATCGTCTTTGTCGTGCAAATCCGCG
TGTCGCCCTATCAACAGCTGTGGGGGGAAAGGAGGTACATGTATATCGAG
TGAGGCACGGCGGTAATGACTTGAGCGGGAT
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Coding sequence (CDS) from alignment at P-lacustris_contig1014:35051..42331+

>mRNA_P-lacustris_contig1014.228.1 ID=mRNA_P-lacustris_contig1014.228.1|Name=mRNA_P-lacustris_contig1014.228.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1752bp|location=Sequence derived from alignment at P-lacustris_contig1014:35051..42331+ (Pleurocladia lacustris SAG_25_93)
ATGACCCTCACAAAGGCAATGAGTTTTGATGTCGTCCGTTTTTTTTGTCA
ACCGCGTGTGACAGAATTCGCGTCGGCAGAAACGGCCGTGAACCTCAGCA
AAGGCGACGCTTTGGAGCACCCCGTCACAGAGCTCGAAGCCGTCCGCTCC
ATCCTGGTGCAGGGGCTCCCGCTGCTTGATCAAGAGCTGACGGAGACTTC
CCTCGTGCAGATGACCCTCACAAAGGCAATGAGTTTTGATGTCGTCCGTT
TTTTTTGTCAACCGCGTGTGACAGAATTCGCGTCGGCAGAAACGGCCGTG
AACCTCAGCAAAGGCGACGCTTTGGAGCACCCCGTCACAGAGCTCGAAGC
CGTCCGCTCCATCCTGGTGCAGGGGCTCCCGCTGCTTGATCAAGAGCTGA
CGGAGACTTCCCTCGTGCAGGTGTTCTCGGCGTACGGCGAAATCTCGAAG
CTGCTCCTGCAAACGATCGAAGGGAGTGTTCTCGGCGTACGGCGAAATCT
CGAAGCTGCTCCTGCAAACGATCGAAGGGAGCAGATCGCAGAGGGCTGTC
CTGGTATTCGCCGAAGCGGCCGGTGCTAACGCTGCTCTGCAGGCAGATCG
CAGAGGGCTGTCCTGGTATTCGCCGAAGCGGCCGGTGCTAACGCTGCTCT
GCAGGCGAACGGGCGCGACATCCTTGGCGCGAACTGCACCGTCAGCTTGG
CGTCGTCCATGCCGATGTTGAGTGACGGGTTGGACCGCGATGACGTCAGC
GATCAGCCTAACGCTCCTGGCGAACGGGCGCGACATCCTTGGCGCGAACT
GCACCGTCAGCTTGGCGTCGTCCATGCCGATGTTGAGTGACGGGTTGGAC
CGCGATGACGTCAGCGATCAGCCTAACGCTCCTGCCGGCAAAATGACCAC
GGCGGAGTGGATCAAGAGCATTTTCGCGCGGGGCATGGTCTACACGCGCT
TGTTCGACGAGAGGCTCGGCGTCTCTCAGACCGCTAAAAGCATAGCAGTA
AAGCCGGCAAAATGACCACGGCGGAGTGGATCAAGAGCATTTTCGCGCGG
GGCATGGTCTACACGCGCTTGTTCGACGAGAGGCTCGGCGTCTCTCAGAC
CGCTAAAAGCATAGCAGTAAAGGTCCAAACTCAGGTGGAGCGGTTAGACG
AGAAGCACAACGTCAGCGGCAAAATTGCTGCGGTTGCCTTGGGCGCGCAG
GCGAAGGTACAAGAGGTCAACACCACGTCCAAACTCAGGTGGAGCGGTTA
GACGAGAAGCACAACGTCAGCGGCAAAATTGCTGCGGTTGCCTTGGGCGC
GCAGGCGAAGGTACAAGAGGTCAACACCACGCTCAAGGTGACGGAGACTG
CGACGAAGTGGGCGAAGACCGCCAAAGAGTCAACGGACAAGGCTCAAGGT
GACGGAGACTGCGACGAAGTGGGCGAAGACCGCCAAAGAGTCAACGGACA
AGGCTCTCGAGAGCAACCCTCGCGTTGCCGCCGGCGTGCAACGAGCAGGA
GATGCCTTCGAAACTGTGGTGCGAAGCGTCAGTGGATTAGCGCAGCAGGC
CCTGGGCCAGCCGAAGCCCTCGGGTCCTGCAGCCCCGGCCGAAGTGCCGT
GAGCTCTCGAGAGCAACCCTCGCGTTGCCGCCGGCGTGCAACGAGCAGGA
GATGCCTTCGAAACTGTGGTGCGAAGCGTCAGTGGATTAGCGCAGCAGGC
CCTGGGCCAGCCGAAGCCCTCGGGTCCTGCAGCCCCGGCCGAAGTGCCGT
GA
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