mRNA_P-lacustris_contig1010.207.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1010.207.1
Unique NamemRNA_P-lacustris_contig1010.207.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: D7FZW6_ECTSI (Complex I intermediate-associated protein 30, mitochondrial (NADH dehydrogenase [ubiquinon) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW6_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 1.360e-162
Identity = 231/296 (78.04%), Postives = 253/296 (85.47%), Query Frame = 1 
Query:   52 MTSVARTYRKYWPTDAVLKGKVALQDLMIFSFSTKDLLAGWDVTTDQRWGGKSTATVSWKPWERLSGAAGSTGSASATAGEAADDDASGLDVQPWRPLKGAASMAAPRGVMQSEGLPTGDEEDTAPPLAKGGFLCFSGELTTEKAASAKFGGFCGTRSTRRKEPLEIPEGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGDTDNNGGVVPRRKPLPPKNGVMSW 939
            M  VARTYRKYWPTDAVLKG   L+DLM+ SFSTKDLLAGWDVTTDQ WGGKSTATVSWKPWERL G   + GSASATA +AA   A  LDVQPWR  +G  + AAPRGV+QSEGLP GDEE+TAPPL KGGF CFSGEL+TE+AA AK GGFCGTRSTRR+EPL +P+GYRGVEMRIRTDGR+YEVNFEP SGIINDLYQGY+RTP GQW+TVSLPLNRLLLTGQGQIRDIQRKWD GMELKSIGFTIADGVGGPFRLD+AW++LV   D D   + G  PR+KPLPP +GVMSW
Sbjct:    1 MARVARTYRKYWPTDAVLKGTAVLEDLMLCSFSTKDLLAGWDVTTDQSWGGKSTATVSWKPWERLGG---TDGSASATAADAAAGGACALDVQPWRLFEGTPATAAPRGVLQSEGLPAGDEENTAPPLEKGGFFCFSGELSTERAARAKVGGFCGTRSTRRQEPLVLPDGYRGVEMRIRTDGRQYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDVGMELKSIGFTIADGVGGPFRLDVAWVALVSEVD-DEGKDDGDAPRKKPLPPTDGVMSW 292
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A6H5KSW2_9PHAE (CIA30 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW2_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 5.990e-57
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 1 
Query:  601 RYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGDTDNNGGVVPRRKPLPPKNGVMSW 939
            RYEVNFEP SGIINDLYQGY+RTP GQW+TVSLPLNRLLLTGQGQIRDIQRKWD GMEL SIGFTIADGVGGPFRLD+AW++LV   D   D+  G  PR+KPLPPK+GVMSW
Sbjct:   29 RYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDMGMELNSIGFTIADGVGGPFRLDVAWVALVSEVDEGKDD--GDAPRKKPLPPKDGVMSW 139
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: W7U321_9STRA (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U321_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.150e-19
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 1 
Query:  457 FSGELTTEKAAS---AKFGGFCGTRSTRRKEPLEIP-----EGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLR-TPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLV 852
            FSG L+  + A+    K  G+C  +       +E+P     EGY G+E+ +RTDGR Y  N E  S   ++LYQGY+   P GQW T+ LP   + LT  G++  IQ++ D+   L+SIGF IADG  GPF L+IA ++ V
Sbjct:   87 FSGNLSNMRPAADPTVKRTGYCALK-------VEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAV 220
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A1V9YVR5_9STRA (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVR5_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.160e-13
Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 1 
Query:  445 GFLCFSGELTTEKAASAKF---GGFCGTRSTRRKEPLEIPE-----GYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHAD 864
            G   FSG L+     + ++    G+C  R         +P+     GY+G+ MRI+TDGR Y +N +  S   +DLY G+L+ P  +W    L  +  +LT +G ++       N   L++IG  +AD   GPF + I WI  +++ D
Sbjct:  498 GAAVFSGNLSLSIQPTEQYVVRSGYCAIRGN-------VPQNLHLHGYKGLAMRIKTDGRTYRINAQADSWNPHDLYMGFLKAPANEWVEAELAFSDFILTSRGYVQMNDPTKLNPASLRTIGIALADDNEGPFSMAIEWIKAIENVD 638
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A0L0DSY5_THETB (NADH dehydrogenase 1 alpha subcomplex n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSY5_THETB)

HSP 1 Score: 77.4 bits (189), Expect = 1.460e-12
Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 1 
Query:  451 LCFSGELTTEKAASAKFGGFCGTRSTRRKEPLEIP--EGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRT----PPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGDTD 876
            + F GEL+T  A      GF   R+        +P  E Y   E+  R DGR Y+ N    S + +DL+Q  L T        W+ V +P + L++T +G ++  Q K D+   + S+GFT+ADGV GPF L I  I  ++ AD D D
Sbjct:   73 VVFKGELSTTPAPGYDRSGFASFRTV---PGTTVPSLEYYDAFEIVCRGDGRPYQFNVGCESVVPDDLHQAALPTHEASAAADWAVVRIPFDALIMTWRGFVQVEQLKLDS-RRITSLGFTLADGVDGPFELAIRDIRAIRMADADAD 216
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A5A8C5V0_CAFRO (CIA30 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5V0_CAFRO)

HSP 1 Score: 76.6 bits (187), Expect = 4.650e-12
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1 
Query:  502 GGFCGTRSTRRKEPLEIPE---GYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDI 834
            GGFC  R   RK   E  E      GV++R++TDGR + +NF+       D++Q  +RT P +W T++LP +      +G +R++Q   +   ++   G T+ADG  GPFR ++
Sbjct:   78 GGFCNVRLRERKPVREDDEEMMATEGVQLRVKTDGRPFLLNFQCRDTTDEDVWQAEVRTAPFRWETLALPWSGFAHVSRGLVREVQMNLEPH-KIDGFGLTVADGRNGPFRCEV 190
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A5A8E3B7_CAFRO (CIA30 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3B7_CAFRO)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-11
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1 
Query:  502 GGFCGTRSTRRKEPLEIPE---GYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDI 834
            GGFC  R   RK   E  E      GV++R++TDGR + +NF+       D++Q  +RT P +W T++LP +      +G +R++Q   +   ++   G T+ADG  GPFR ++
Sbjct:  107 GGFCNVRLRERKPVREDDEEMMATEGVQLRVKTDGRPFLLNFQCRDTTDEDVWQAEVRTAPFRWETLALPWSGFAHVSRGLVREVQMNLEPH-KIDGFGLTVADGRNGPFRCEV 219
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A139GY44_9PEZI (CIA30 domain-containing protein n=4 Tax=Pseudocercospora TaxID=131324 RepID=A0A139GY44_9PEZI)

HSP 1 Score: 75.1 bits (183), Expect = 2.210e-11
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 1 
Query:  562 YRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRT-PPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIA 837
            Y  + +RIR+DGR+Y VNF+  S +  DL+Q  L +  PGQW TV++PL   + T  GQ+ + QR+  +  +++S+G ++ D V GPF L IA
Sbjct:  148 YSFLALRIRSDGRKYFVNFQTESIVPTDLHQHLLPSCTPGQWETVTIPLGAFVRTNYGQVAEPQREMMS-TKVRSVGISLIDRVPGPFELAIA 239
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: L7MD23_RHIPC (CIA30 domain-containing protein (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MD23_RHIPC)

HSP 1 Score: 73.9 bits (180), Expect = 8.830e-11
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 1 
Query:  457 FSGELTTEKAASAKF--GGFCGTRSTRRKEPLEIPEGY-----RGVEMRIRTDGRRYEVNF--EPHSGII-NDLYQGYLRTPPGQ-WSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWI 843
            FSG L T      K    G+C  RS R + P  +P  Y       +E+RIR DGR Y +N   + +  +  N LYQ  L T  G  W    +P ++ L+  +G+++D Q   D    +K +G T+ADG+ GPFRL++ +I
Sbjct:  171 FSGYLDTTVPKDGKMVETGYCNMRSPRARRPFNMPAAYDWSSFTHLELRIRGDGRSYLINLGADQYFDVTWNVLYQFPLYTRGGPYWQVARIPFSKFLVGNKGRVQDKQGAIDL-TNVKHMGITLADGIAGPFRLEVDYI 309
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BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: L7MEY0_RHIPC (CIA30 domain-containing protein (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MEY0_RHIPC)

HSP 1 Score: 73.9 bits (180), Expect = 1.110e-10
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 1 
Query:  457 FSGELTTEKAASAKF--GGFCGTRSTRRKEPLEIPEGY-----RGVEMRIRTDGRRYEVNF--EPHSGII-NDLYQGYLRTPPGQ-WSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWI 843
            FSG L T      K    G+C  RS R + P  +P  Y       +E+RIR DGR Y +N   + +  +  N LYQ  L T  G  W    +P ++ L+  +G+++D Q   D    +K +G T+ADG+ GPFRL++ +I
Sbjct:  202 FSGYLDTTVPKDGKMVETGYCNMRSPRARRPFNMPAAYDWSSFTHLELRIRGDGRSYLINLGADQYFDVTWNVLYQFPLYTRGGPYWQVARIPFSKFLVGNKGRVQDKQGAIDL-TNVKHMGITLADGIAGPFRLEVDYI 340
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW6_ECTSI1.360e-16278.04Complex I intermediate-associated protein 30, mito... [more]
A0A6H5KSW2_9PHAE5.990e-5780.53CIA30 domain-containing protein n=1 Tax=Ectocarpus... [more]
W7U321_9STRA1.150e-1941.13NADH:ubiquinone oxidoreductase intermediate-associ... [more]
A0A1V9YVR5_9STRA1.160e-1331.08Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A0L0DSY5_THETB1.460e-1235.14NADH dehydrogenase 1 alpha subcomplex n=1 Tax=Thec... [more]
A0A5A8C5V0_CAFRO4.650e-1234.21CIA30 domain-containing protein n=2 Tax=Cafeteria ... [more]
A0A5A8E3B7_CAFRO1.280e-1134.21CIA30 domain-containing protein n=2 Tax=Cafeteria ... [more]
A0A139GY44_9PEZI2.210e-1141.94CIA30 domain-containing protein n=4 Tax=Pseudocerc... [more]
L7MD23_RHIPC8.830e-1135.00CIA30 domain-containing protein (Fragment) n=1 Tax... [more]
L7MEY0_RHIPC1.110e-1035.00CIA30 domain-containing protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1010contigP-lacustris_contig1010:50210..55795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.2
Seed ortholog evalue4.6e-131
Seed eggNOG ortholog2880.D7FZW6
Preferred nameNDUFAF1
KEGG koko:K18159
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005829,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031667,GO:0031966,GO:0031967,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0036293,GO:0036296,GO:0042594,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050896,GO:0051082,GO:0055086,GO:0055093,GO:0055114,GO:0065003,GO:0070469,GO:0070482,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.mitochondrial respiratory chain complex I assembly
EggNOG OGsKOG2435@1,KOG2435@2759
Ec32 ortholog descriptionComplex I intermediate-associated protein 30, mitochondrial precursor (NADH dehydrogenase [ubiquinon])
Ec32 orthologEc-22_003820.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Exons6
Model size1375
Cds size891
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1010.207.1prot_P-lacustris_contig1010.207.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1010 50643..55744 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815281.1575673-UTR-P-lacustris_contig1010:50209..506421622815281.1575673-UTR-P-lacustris_contig1010:50209..50642Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1010 50210..50642 -
1693493448.2890325-UTR-P-lacustris_contig1010:50209..506421693493448.2890325-UTR-P-lacustris_contig1010:50209..50642Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1010 50210..50642 -
1622815281.2416596-UTR-P-lacustris_contig1010:55744..557951622815281.2416596-UTR-P-lacustris_contig1010:55744..55795Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1010 55745..55795 -
1693493448.389759-UTR-P-lacustris_contig1010:55744..557951693493448.389759-UTR-P-lacustris_contig1010:55744..55795Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1010 55745..55795 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815281.1759667-CDS-P-lacustris_contig1010:50642..507261622815281.1759667-CDS-P-lacustris_contig1010:50642..50726Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 50643..50726 -
1693493448.301071-CDS-P-lacustris_contig1010:50642..507261693493448.301071-CDS-P-lacustris_contig1010:50642..50726Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 50643..50726 -
1622815281.1862776-CDS-P-lacustris_contig1010:51601..518571622815281.1862776-CDS-P-lacustris_contig1010:51601..51857Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 51602..51857 -
1693493448.3101664-CDS-P-lacustris_contig1010:51601..518571693493448.3101664-CDS-P-lacustris_contig1010:51601..51857Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 51602..51857 -
1622815281.1954846-CDS-P-lacustris_contig1010:53620..537301622815281.1954846-CDS-P-lacustris_contig1010:53620..53730Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 53621..53730 -
1693493448.3336108-CDS-P-lacustris_contig1010:53620..537301693493448.3336108-CDS-P-lacustris_contig1010:53620..53730Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 53621..53730 -
1622815281.2069929-CDS-P-lacustris_contig1010:53991..541201622815281.2069929-CDS-P-lacustris_contig1010:53991..54120Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 53992..54120 -
1693493448.353066-CDS-P-lacustris_contig1010:53991..541201693493448.353066-CDS-P-lacustris_contig1010:53991..54120Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 53992..54120 -
1622815281.2171943-CDS-P-lacustris_contig1010:54555..547121622815281.2171943-CDS-P-lacustris_contig1010:54555..54712Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 54556..54712 -
1693493448.3639374-CDS-P-lacustris_contig1010:54555..547121693493448.3639374-CDS-P-lacustris_contig1010:54555..54712Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 54556..54712 -
1622815281.229164-CDS-P-lacustris_contig1010:55589..557441622815281.229164-CDS-P-lacustris_contig1010:55589..55744Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 55590..55744 -
1693493448.374916-CDS-P-lacustris_contig1010:55589..557441693493448.374916-CDS-P-lacustris_contig1010:55589..55744Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1010 55590..55744 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1010.207.1

>prot_P-lacustris_contig1010.207.1 ID=prot_P-lacustris_contig1010.207.1|Name=mRNA_P-lacustris_contig1010.207.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=297bp
MTSVARTYRKYWPTDAVLKGKVALQDLMIFSFSTKDLLAGWDVTTDQRWG
GKSTATVSWKPWERLSGAAGSTGSASATAGEAADDDASGLDVQPWRPLKG
AASMAAPRGVMQSEGLPTGDEEDTAPPLAKGGFLCFSGELTTEKAASAKF
GGFCGTRSTRRKEPLEIPEGYRGVEMRIRTDGRRYEVNFEPHSGIINDLY
QGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIA
DGVGGPFRLDIAWISLVQHADGDTDNNGGVVPRRKPLPPKNGVMSW*
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mRNA from alignment at P-lacustris_contig1010:50210..55795-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1010.207.1 ID=mRNA_P-lacustris_contig1010.207.1|Name=mRNA_P-lacustris_contig1010.207.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5586bp|location=Sequence derived from alignment at P-lacustris_contig1010:50210..55795- (Pleurocladia lacustris SAG_25_93)
ATCGTCCACATCTTTGGCTCTCGCCTTCCGCACACGCTTGGTTTAAGAAA
CATGACGAGTGTAGCAAGGACGTACAGGAAGTACTGGCCCACGGATGCCG
TGCTCAAGGGAAAAGTGGCGCTGCAGGACCTGATGATTTTCTCATTCTCC
ACCAAGGACCTCCTGGCGGGGTGGGATGTAACCACCGACCAGCGCTGGGG
CGGCAAGTGAGCGCTTAACGCGCGGTCCCAGACGTGACATGCACGCGGTG
ACAGCGAATAGAAAATGTTGGTTTAGTGCCCACTATGTAACATTCATGCA
CAGCTCGGGGACAGCAGTTGCGTGATCTGCGGAACGATTCGCGATATTCC
ATTCCAGGGTGCAAAAATGAAAACAGCAGTAGCAGCGACAAACCTTTTGC
TGTGGCAAGCCAAACCTTGGCCTTTGGGCTGCCGTCTCTTTCGTTGGAAG
GCTGTTGACGTGATCTGTACGGGGGTTCGAATCCCACCGTGGTACGGCCG
TGGGCTTTTTTCCGAAAATAAATGAGAAAAAATGAGCCGTCATCATGTCA
GCGCGGCGAGGGGCAGAGAAGGCTGCCTCGGAGATTCACTGGTGATGGCG
GTGAGATGGGATTCGTACCCCCACACTATATCTCTCGTTAGGTGGCACAA
ATTACCAATTGTGCTACTAGTCAGCGCTGACTAGTGGCACAATTTGGAAT
TTGTGCTACTTAAAGAAGGCGTTTCTTTCATCTCTCTCTGTAGTCGGCAA
AGCCGTCAGCGCGTTACATGTCCAATACGATTTGCCACCACATGCGGGAA
CAATGTTGCCAGGAACGAAGGTAATAAGTACCTTCGTCACCCCCGTGAGG
ATTTGTGTGTGCGTCCGTGGAATGCGCTGTGACACAGCAGTGAACAGTGG
TCGTTCGTACGGATGCGCTGCCTTACTCCGTTGTCTTCAAAATGCAGTAG
TCAGGCCCAACCTACGTTGCTTGAAGCAGCAGTGAACACCAGTGCCTACT
CCACACCATGAAACCGCCATTGGGTTGTCCATACGTACACCTGCAATGCA
TTCGATGGTGGGGTTTGTTTAACGCCCTGACAGGTCTACAGCCACCGTAT
CATGGAAGCCCTGGGAACGACTGAGTGGGGCCGCTGGGTCTACTGGGTCT
GCTTCCGCCACTGCTGGCGAGGCCGCTGATGATGACGCTAGTGGTTTAGA
CGTACAGCCATGGAGGCCGTTGAAAGGAGCAGCTTCGATGGTGTGTTGGC
GGGTGTATGAATCCCGTCGTTTCATCTTTACCCCGCCCTCAGGCACGCAT
GGGTTGTGTTGGCGCCTTCATTTTTTTATTAGGTTGATACATGAGCTCCA
TCGTGAATCCGTCCGGACTCATTGTTGTCAGCCGATCTGACCCTGCGTAC
GAACGAATACGATCCTCAACATGCGACCGCGGGTCGGGACAACACCGGGG
CTTGTGTGAAGCATGACAAGTCTCACATGCCGGTCTAGTGAGAAATTCCT
GCTTCTCCAGTAGTGCTCGCCGCTGGGCAGGCATGCTTTGCTCATCAACA
CCGCGCATGGCTGGGGTTTAGTGTTATGTCGACTGTCTTGCTCAAGGGGT
TGGACGTGATTTGCAGCCGGCGTGTAGAGCATATGGATTTTGTCCAACGT
ATTTCAGTGTTCCCGTTTGTCGCAGGCGGCCCCACGAGGCGTGATGCAGT
CGGAGGGTCTGCCGACAGGGGATGAGGAGGACACAGCCCCTCCCTTGGCG
AAGGGGGGATTTTTATGCTTTTCAGGAGAGCTCACCACCGAGAAAGCTGC
ATCGGTAGGCTTGAAAGGGTCAGAGTCTGGCAAGGATTCGGTTTCAAGGA
TAGAGCGGGAAGTTAACCGTTCGTGCTTGTGATGTGTTGCTGGCAGTCCC
AAGAGCTGCCCCTGTCGCTCCTCCTGCTGCTGCGATTCTTCAAGGTCGCC
TTAGCTGTTGCCGTTTGTTCGTTGACTTGTTAACTTTCCTATCAGAAACC
CGTTTTCTTTTTTCGTGTTATGTGGTATGTTTCCATCGGCCTGTGGTCGG
TCCGTCCCGCACCAGGCTAAGTTTGGTGGGTTTTGCGGAACAAGGTCGAC
TCGGCGCAAAGAGCCTCTTGAAATACCAGAAGGCTACCGTGGAGTGGAAA
TGCGAATACGAACGGATGGGCGCCGGTCAGTGCTGTTTTTTCATGTCTGC
TTCTTGACGCTGCTGTTGATTGGTCGCATGTTTTTCGCGTCACACGTATA
TCCGATTTCCTCCAACCCGCGGTCGCAGTTGAAGGCTTTTCTTGGCACCG
CGGTTGCAGCCACTTGCGCACAGGGAGGGAAACATTCGAAGTGTAGATTA
TTGAGACCCAAGGGATAGTCACCATGTGGGAAATGGCACGACGATACGAG
TGGCATTGCCGACCCGTGGTTACCGTTTTTTTTGTTTGTTTCTTCACATT
AAAAACCGTTCCGGTCTCTCCACCCCAGTACCCCTAAATGTCCGTACTGA
TCCAACACTTGACGCGGTCGATTCCCGTGGTCACAGGCTAACTTACCCCC
AAAAGAGGGTACACAAATAAAAGTGGACCCGAGATGTCTGCAGAGCAATA
GATTACAAACTTAGAAAACAGATAATATGTTGGAACCCTCCGTTCCCCTC
TACACGCTATGTGAGGCAAAAACAAAAACAAAATTAATAGCGGAATTCAA
CACACCAGTCTGGATATTCTCATATCTCTGACTCTATCTTGTATCCCTAC
AGCAGTGCCGAGGTTTTCCGTGCTGGGTTCTCGCCGGCTATGCAAAGAAA
TCAGGCCCCCAGCCGATTTAGTCCAGAAACAACCAGAAGAGAATCATCAA
TAGACCTCCGGTAGGTAGACATAAATAAACGGGCTATTTCAGACACCCAA
ATGAACAAACAAACAAAGCCACAGCGATACGCACGAGGTGCAGTGCTGTG
GGTGGGGGAGGTTAGCCACAAAAATAAAAATAAATCAATCCGGTACATAT
CGCGCTACTCGTTCTGTCTCTTCTCGCTTGCTTTCCTCCCTCGCCGTTAT
GTCCGTCTGTTGCCCCTTTCCCGCCCCCTGGTTGGTGCCATCTCTAAACT
ACTTCTAGCCTCATTGTCCCTCTTGACCTGCCGTTGCCGGCTGGCCTCCT
CTTCCTCCTTGTGCCATGCTGTCATGAACCTCTCAGCTCCCTGCAGTACC
CCCGTATACCATGGCCTGCCCCCTACCGTACGTGCCATATATTCCAGGCT
TTCGGCCCATTTTGGAATATCCCTGTTCATACCTGATATTTCACGTCGCA
TCGACGCGTGTCATGCGCTACCCCTGCATGGTGTGAATTCGATAAATCAT
ATGTGGAAGCTTTGCAAACATTCTGTGCTAGGGGTTAAGGGTGGTGGTAG
TTCTGCTTTGAGTAACTGAAAAACGGTGGTATGCCGAGGAGGACGACGAC
GAGCACCGCTAGAGTATCACCGTCAGCCTGTGTCTTCGCAAACAAACCGG
AGAAGCAGGAACGTTTTCATGATGCACCCCAATCAATATTTTTCAAAATC
CAAGTAGGTGGCAATTCGAGCGGCAACCGGGCATCCCGAATCACCTCTCC
GGCACTAACAAATACTTACCGCGGACAAATATCGCGTCGAAAGTGAAGTA
ATGATCCTTGAACAAGTCTCCGCAACATTGCATGTTGTGCAAGCCTCCCT
TTGTTTCCCCCCCGCAGGCACGAAGTCATTTTCTCGCGAAATTTCGAGCT
GCAACAGGGGACCGAATCCATTGCCGTCGATACCATGCTCGTTGTCTGGC
CTATTGAAAAAACATCGCCAGTAAATATGCACGCGTATGTTTCGAGGTGA
AAATGGGTTTGTGTTTGACGAAACGAAGACGGCGCGATCTATCGGAACCG
AAACTTAGCATCATGGCATACCCCTTGCACCCCATCAGATATGAGGTGAA
CTTCGAGCCGCATTCGGGCATCATCAACGACCTCTACCAGGGATACCTGC
GGACCCCCCCGGGCCAATGGTCGACCGTTTCACTCCCCCTGAACCGCCTT
CTTCTGACGGGGCAGGGCCAGATCCGCGACATCCAAAGGAAGTGGGACAA
TGGAATGGAGCTAAAGTCGATCGGGTTCACCATCGCGGACGGCGTCGGCG
GGCCGTTCCGACTGGACATCGCGTGGATTTCGCTGGTGCAACACGTGAGA
ACCGTCGAGGATGGCGGAGTATGTCCTTCCCATCCAAAGAGTTGCTTTTG
CGGGGTGGGACTGGCGAGGATCGCGTTCACAATCATCGAAAAGGGGCCGG
CGAGCCATTCGGATTGGGTGTTGCTCATGGGTATGATAGATGCGAGTGGT
TGTTCCACACTTTGTTGTGATGGAGATGTGGCGGGATGGGGAGTAATGGG
TTGTGCTTGTCTTGCAGGCTAGGATGCACTATCGCTGTTTCGGTTGGGAT
CGCCTTGCTCTTTGAGATCGGAATCGGAATCAAGCAGTCAACACGTAAAC
AAATCTGCTGTGGCCTTTTATTTGCAGTTTTCCCGTCTATGACAATTCTG
TGTTAAATTGTTACTCGAACATAGATCGCTGATCTCCTTCGTATTAGACC
CTACGCCAAATGAGGTTTGCTTTAGCAGCACAGAATTGCAAAGGTCTGTT
TTTTGGGCTGTGCTCTCCTCGTTTTCGTCATCGCGAGTTTCGGGATTGAC
GCCGTATTCTGGTTGGCAGTTCGTGGTTTGGCTTGGGCTAATCATCGCTC
GCTCTTGGTCCTTATCGTTGAACTCTGTTTCTTTTTCCCTCAATTGATTG
CTTTTGATTTTTGGGTGTTTCCTCGGCTTTTATTTTACCCTTTCTGTCTT
GGTCCAATTCACGTACTCTTTACGGCTGTTGCTGCGCTCCTGCCTTGGTC
CATCCGCCGACGCTTTCCCGGAATTTTTCAACAATAGTTCAGCTCGAGTT
TCGTTTTAGAGTGGCCTGTTTCCTCCATTTCACGTCCCAGGTTGTCCTTG
CGTAGTTTTGTTCATCTTGCGTTCCCCCCTTTTTTGTTTTTGCTTTTTTT
TCACCGCCAACGCTGTCAGGCGGATGGAGACACGGACAACAACGGCGGGG
TCGTGCCTAGGAGAAAACCACTTCCGCCCAAGAATGGAGTCATGTCGTGG
TAAAATATTCCGGTCCAAGGTAAATCCATGTCAGCAGGACGCACGGTCGT
ACATGGCGGACCCTTGAGAGCACCTTTAAGCATCGAGGGAGTTTCAAGGA
CGGCCTGCCGCTGGTTGAGCCGTAGCCGCGTGATTCGCGGGGCAACAAGT
GCTGCATAATCTTGCCTTGAGGGCCACACACTCGATTGTGAACTTGAGGA
ATCACTCCTCAGGGAGAGCGAATGTGGAACCTTTTTGTTTGGCGGAAGCG
ACGGCAACCACATACCACCGAGGTAAAATCTGGTTTCGTGTGACCACGAA
TCAGAGTCACGGTGTGACCTGAATCGGAGCCGCAGTCAGAAACTAGGCCA
AAAGCGCACGACGACGGGTAGGTAGGGTAGGAGCTGTAATCTGGCCTTAT
CTATGGTGGGGGAGAAACAGCAACTTGGTTCGTTGG
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Coding sequence (CDS) from alignment at P-lacustris_contig1010:50210..55795-

>mRNA_P-lacustris_contig1010.207.1 ID=mRNA_P-lacustris_contig1010.207.1|Name=mRNA_P-lacustris_contig1010.207.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1782bp|location=Sequence derived from alignment at P-lacustris_contig1010:50210..55795- (Pleurocladia lacustris SAG_25_93)
ATGACGAGTGTAGCAAGGACGTACAGGAAGTACTGGCCCACGGATGCCGT
GCTCAAGGGAAAAGTGGCGCTGCAGGACCTGATGATTTTCTCATTCTCCA
CCAAGGACCTCCTGGCGGGGTGGGATGTAACCACCGACCAGCGCTGGGGC
GGCAAATGACGAGTGTAGCAAGGACGTACAGGAAGTACTGGCCCACGGAT
GCCGTGCTCAAGGGAAAAGTGGCGCTGCAGGACCTGATGATTTTCTCATT
CTCCACCAAGGACCTCCTGGCGGGGTGGGATGTAACCACCGACCAGCGCT
GGGGCGGCAAGTCTACAGCCACCGTATCATGGAAGCCCTGGGAACGACTG
AGTGGGGCCGCTGGGTCTACTGGGTCTGCTTCCGCCACTGCTGGCGAGGC
CGCTGATGATGACGCTAGTGGTTTAGACGTACAGCCATGGAGGCCGTTGA
AAGGAGCAGCTTCGATGGTCTACAGCCACCGTATCATGGAAGCCCTGGGA
ACGACTGAGTGGGGCCGCTGGGTCTACTGGGTCTGCTTCCGCCACTGCTG
GCGAGGCCGCTGATGATGACGCTAGTGGTTTAGACGTACAGCCATGGAGG
CCGTTGAAAGGAGCAGCTTCGATGGCGGCCCCACGAGGCGTGATGCAGTC
GGAGGGTCTGCCGACAGGGGATGAGGAGGACACAGCCCCTCCCTTGGCGA
AGGGGGGATTTTTATGCTTTTCAGGAGAGCTCACCACCGAGAAAGCTGCA
TCGGCGGCCCCACGAGGCGTGATGCAGTCGGAGGGTCTGCCGACAGGGGA
TGAGGAGGACACAGCCCCTCCCTTGGCGAAGGGGGGATTTTTATGCTTTT
CAGGAGAGCTCACCACCGAGAAAGCTGCATCGGCTAAGTTTGGTGGGTTT
TGCGGAACAAGGTCGACTCGGCGCAAAGAGCCTCTTGAAATACCAGAAGG
CTACCGTGGAGTGGAAATGCGAATACGAACGGATGGGCGCCGGCTAAGTT
TGGTGGGTTTTGCGGAACAAGGTCGACTCGGCGCAAAGAGCCTCTTGAAA
TACCAGAAGGCTACCGTGGAGTGGAAATGCGAATACGAACGGATGGGCGC
CGATATGAGGTGAACTTCGAGCCGCATTCGGGCATCATCAACGACCTCTA
CCAGGGATACCTGCGGACCCCCCCGGGCCAATGGTCGACCGTTTCACTCC
CCCTGAACCGCCTTCTTCTGACGGGGCAGGGCCAGATCCGCGACATCCAA
AGGAAGTGGGACAATGGAATGGAGCTAAAGTCGATCGGGTTCACCATCGC
GGACGGCGTCGGCGGGCCGTTCCGACTGGACATCGCGTGGATTTCGCTGG
TGCAACACATATGAGGTGAACTTCGAGCCGCATTCGGGCATCATCAACGA
CCTCTACCAGGGATACCTGCGGACCCCCCCGGGCCAATGGTCGACCGTTT
CACTCCCCCTGAACCGCCTTCTTCTGACGGGGCAGGGCCAGATCCGCGAC
ATCCAAAGGAAGTGGGACAATGGAATGGAGCTAAAGTCGATCGGGTTCAC
CATCGCGGACGGCGTCGGCGGGCCGTTCCGACTGGACATCGCGTGGATTT
CGCTGGTGCAACACGCGGATGGAGACACGGACAACAACGGCGGGGTCGTG
CCTAGGAGAAAACCACTTCCGCCCAAGAATGGAGTCATGTCGTGGTAAGC
GGATGGAGACACGGACAACAACGGCGGGGTCGTGCCTAGGAGAAAACCAC
TTCCGCCCAAGAATGGAGTCATGTCGTGGTAA
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