prot_P-lacustris_contig1010.207.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1010.207.1
Unique Nameprot_P-lacustris_contig1010.207.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length297
Homology
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: D7FZW6_ECTSI (Complex I intermediate-associated protein 30, mitochondrial (NADH dehydrogenase [ubiquinon) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW6_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 7.490e-166
Identity = 231/296 (78.04%), Postives = 253/296 (85.47%), Query Frame = 0
Query:    1 MTSVARTYRKYWPTDAVLKGKVALQDLMIFSFSTKDLLAGWDVTTDQRWGGKSTATVSWKPWERLSGAAGSTGSASATAGEAADDDASGLDVQPWRPLKGAASMAAPRGVMQSEGLPTGDEEDTAPPLAKGGFLCFSGELTTEKAASAKFGGFCGTRSTRRKEPLEIPEGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGDTDNNGGVVPRRKPLPPKNGVMSW 296
            M  VARTYRKYWPTDAVLKG   L+DLM+ SFSTKDLLAGWDVTTDQ WGGKSTATVSWKPWERL G   + GSASATA +AA   A  LDVQPWR  +G  + AAPRGV+QSEGLP GDEE+TAPPL KGGF CFSGEL+TE+AA AK GGFCGTRSTRR+EPL +P+GYRGVEMRIRTDGR+YEVNFEP SGIINDLYQGY+RTP GQW+TVSLPLNRLLLTGQGQIRDIQRKWD GMELKSIGFTIADGVGGPFRLD+AW++LV   D D   + G  PR+KPLPP +GVMSW
Sbjct:    1 MARVARTYRKYWPTDAVLKGTAVLEDLMLCSFSTKDLLAGWDVTTDQSWGGKSTATVSWKPWERLGG---TDGSASATAADAAAGGACALDVQPWRLFEGTPATAAPRGVLQSEGLPAGDEENTAPPLEKGGFFCFSGELSTERAARAKVGGFCGTRSTRRQEPLVLPDGYRGVEMRIRTDGRQYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDVGMELKSIGFTIADGVGGPFRLDVAWVALVSEVD-DEGKDDGDAPRKKPLPPTDGVMSW 292          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A6H5KSW2_9PHAE (CIA30 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.590e-59
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0
Query:  184 RYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGDTDNNGGVVPRRKPLPPKNGVMSW 296
            RYEVNFEP SGIINDLYQGY+RTP GQW+TVSLPLNRLLLTGQGQIRDIQRKWD GMEL SIGFTIADGVGGPFRLD+AW++LV   D   D+  G  PR+KPLPPK+GVMSW
Sbjct:   29 RYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDMGMELNSIGFTIADGVGGPFRLDVAWVALVSEVDEGKDD--GDAPRKKPLPPKDGVMSW 139          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: W7U321_9STRA (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U321_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.300e-20
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 0
Query:  136 FSGELTTEKAAS---AKFGGFCGTRSTRRKEPLEIP-----EGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLR-TPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLV 267
            FSG L+  + A+    K  G+C  +       +E+P     EGY G+E+ +RTDGR Y  N E  S   ++LYQGY+   P GQW T+ LP   + LT  G++  IQ++ D+   L+SIGF IADG  GPF L+IA ++ V
Sbjct:   87 FSGNLSNMRPAADPTVKRTGYCALK-------VEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAV 220          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A1V9YVR5_9STRA (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVR5_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.600e-14
Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 0
Query:  132 GFLCFSGELTTEKAASAKF---GGFCGTRSTRRKEPLEIPE-----GYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHAD 271
            G   FSG L+     + ++    G+C  R         +P+     GY+G+ MRI+TDGR Y +N +  S   +DLY G+L+ P  +W    L  +  +LT +G ++       N   L++IG  +AD   GPF + I WI  +++ D
Sbjct:  498 GAAVFSGNLSLSIQPTEQYVVRSGYCAIRGN-------VPQNLHLHGYKGLAMRIKTDGRTYRINAQADSWNPHDLYMGFLKAPANEWVEAELAFSDFILTSRGYVQMNDPTKLNPASLRTIGIALADDNEGPFSMAIEWIKAIENVD 638          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A0L0DSY5_THETB (NADH dehydrogenase 1 alpha subcomplex n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSY5_THETB)

HSP 1 Score: 77.4 bits (189), Expect = 3.930e-13
Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 0
Query:  134 LCFSGELTTEKAASAKFGGFCGTRSTRRKEPLEIP--EGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRT----PPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGDTD 275
            + F GEL+T  A      GF   R+        +P  E Y   E+  R DGR Y+ N    S + +DL+Q  L T        W+ V +P + L++T +G ++  Q K D+   + S+GFT+ADGV GPF L I  I  ++ AD D D
Sbjct:   73 VVFKGELSTTPAPGYDRSGFASFRTV---PGTTVPSLEYYDAFEIVCRGDGRPYQFNVGCESVVPDDLHQAALPTHEASAAADWAVVRIPFDALIMTWRGFVQVEQLKLDS-RRITSLGFTLADGVDGPFELAIRDIRAIRMADADAD 216          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A5A8C5V0_CAFRO (CIA30 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5V0_CAFRO)

HSP 1 Score: 76.6 bits (187), Expect = 1.250e-12
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0
Query:  151 GGFCGTRSTRRKEPLEIPE---GYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDI 261
            GGFC  R   RK   E  E      GV++R++TDGR + +NF+       D++Q  +RT P +W T++LP +      +G +R++Q   +   ++   G T+ADG  GPFR ++
Sbjct:   78 GGFCNVRLRERKPVREDDEEMMATEGVQLRVKTDGRPFLLNFQCRDTTDEDVWQAEVRTAPFRWETLALPWSGFAHVSRGLVREVQMNLEPH-KIDGFGLTVADGRNGPFRCEV 190          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A5A8E3B7_CAFRO (CIA30 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3B7_CAFRO)

HSP 1 Score: 76.6 bits (187), Expect = 3.100e-12
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0
Query:  151 GGFCGTRSTRRKEPLEIPE---GYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDI 261
            GGFC  R   RK   E  E      GV++R++TDGR + +NF+       D++Q  +RT P +W T++LP +      +G +R++Q   +   ++   G T+ADG  GPFR ++
Sbjct:  107 GGFCNVRLRERKPVREDDEEMMATEGVQLRVKTDGRPFLLNFQCRDTTDEDVWQAEVRTAPFRWETLALPWSGFAHVSRGLVREVQMNLEPH-KIDGFGLTVADGRNGPFRCEV 219          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A139GY44_9PEZI (CIA30 domain-containing protein n=4 Tax=Pseudocercospora TaxID=131324 RepID=A0A139GY44_9PEZI)

HSP 1 Score: 75.1 bits (183), Expect = 6.100e-12
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0
Query:  171 YRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRT-PPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIA 262
            Y  + +RIR+DGR+Y VNF+  S +  DL+Q  L +  PGQW TV++PL   + T  GQ+ + QR+  +  +++S+G ++ D V GPF L IA
Sbjct:  148 YSFLALRIRSDGRKYFVNFQTESIVPTDLHQHLLPSCTPGQWETVTIPLGAFVRTNYGQVAEPQREMMS-TKVRSVGISLIDRVPGPFELAIA 239          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: A0A0D2UCD6_CAPO3 (CIA30 domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCD6_CAPO3)

HSP 1 Score: 73.2 bits (178), Expect = 1.860e-11
Identity = 54/172 (31.40%), Postives = 81/172 (47.09%), Query Frame = 0
Query:  136 FSGELTTEKAASAKF--GGFCGTRSTRRKEPLEIP-----EGYRGVEMRIRTDGRRYEVNFEPHSGIINDLYQGYLRTPPG-QWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWISLVQHADGD-----------TDNNGGVVPRRKPLP 288
            F G L+  K   +K    GF   RS R       P     E +  VE+ +R DGR Y  N    S   +D+YQ ++ T  G +W  + LP  R LLT  G +++ Q  + N   +++ GF++ADGV GPF L+I  I ++   + D           TDN+     + +P P
Sbjct:   75 FDGVLSQAKPQGSKLVRSGFAAIRSKRYPRTPLAPYTMNLEAFDTVELILRGDGRTYISNLSTDSVQEHDVYQSFVYTRGGPEWERILLPFARYLLTYHGYVQEDQPVF-NKRAIRTFGFSLADGVEGPFALEIKSIRVLNTDNDDVAPDNYPDSTPTDNSAAPPAKTRPTP 245          
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Match: L7MD23_RHIPC (CIA30 domain-containing protein (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MD23_RHIPC)

HSP 1 Score: 73.9 bits (180), Expect = 2.370e-11
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 0
Query:  136 FSGELTTEKAASAKF--GGFCGTRSTRRKEPLEIPEGY-----RGVEMRIRTDGRRYEVNF--EPHSGII-NDLYQGYLRTPPGQ-WSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIADGVGGPFRLDIAWI 264
            FSG L T      K    G+C  RS R + P  +P  Y       +E+RIR DGR Y +N   + +  +  N LYQ  L T  G  W    +P ++ L+  +G+++D Q   D    +K +G T+ADG+ GPFRL++ +I
Sbjct:  171 FSGYLDTTVPKDGKMVETGYCNMRSPRARRPFNMPAAYDWSSFTHLELRIRGDGRSYLINLGADQYFDVTWNVLYQFPLYTRGGPYWQVARIPFSKFLVGNKGRVQDKQGAIDL-TNVKHMGITLADGIAGPFRLEVDYI 309          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1010.207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW6_ECTSI7.490e-16678.04Complex I intermediate-associated protein 30, mito... [more]
A0A6H5KSW2_9PHAE1.590e-5980.53CIA30 domain-containing protein n=1 Tax=Ectocarpus... [more]
W7U321_9STRA1.300e-2041.13NADH:ubiquinone oxidoreductase intermediate-associ... [more]
A0A1V9YVR5_9STRA1.600e-1431.08Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A0L0DSY5_THETB3.930e-1335.14NADH dehydrogenase 1 alpha subcomplex n=1 Tax=Thec... [more]
A0A5A8C5V0_CAFRO1.250e-1234.21CIA30 domain-containing protein n=2 Tax=Cafeteria ... [more]
A0A5A8E3B7_CAFRO3.100e-1234.21CIA30 domain-containing protein n=2 Tax=Cafeteria ... [more]
A0A139GY44_9PEZI6.100e-1241.94CIA30 domain-containing protein n=4 Tax=Pseudocerc... [more]
A0A0D2UCD6_CAPO31.860e-1131.40CIA30 domain-containing protein n=1 Tax=Capsaspora... [more]
L7MD23_RHIPC2.370e-1135.00CIA30 domain-containing protein (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013857NADH:ubiquinone oxidoreductase intermediate-associated protein 30PFAMPF08547CIA30coord: 131..261
e-value: 2.6E-22
score: 79.6
IPR039131Complex I intermediate-associated protein 30, mitochondrialPANTHERPTHR13194COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30coord: 18..276
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 128..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1010contigP-lacustris_contig1010:50643..55744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1010.207.1mRNA_P-lacustris_contig1010.207.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1010 50210..55795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1010.207.1 ID=prot_P-lacustris_contig1010.207.1|Name=mRNA_P-lacustris_contig1010.207.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=297bp
MTSVARTYRKYWPTDAVLKGKVALQDLMIFSFSTKDLLAGWDVTTDQRWG
GKSTATVSWKPWERLSGAAGSTGSASATAGEAADDDASGLDVQPWRPLKG
AASMAAPRGVMQSEGLPTGDEEDTAPPLAKGGFLCFSGELTTEKAASAKF
GGFCGTRSTRRKEPLEIPEGYRGVEMRIRTDGRRYEVNFEPHSGIINDLY
QGYLRTPPGQWSTVSLPLNRLLLTGQGQIRDIQRKWDNGMELKSIGFTIA
DGVGGPFRLDIAWISLVQHADGDTDNNGGVVPRRKPLPPKNGVMSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013857NADH-UbQ_OxRdtase-assoc_prot30
IPR039131NDUFAF1
IPR008979Galactose-bd-like_sf