mRNA_P-lacustris_contig1002.132.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 1072 bits (2772), Expect = 0.000e+0 Identity = 583/752 (77.53%), Postives = 639/752 (84.97%), Query Frame = 3 Query: 141 MRTVCVSLPQAVLLGLAGSSRAFLQSVRPTRFVVPAHKYHAAVSRTRAVQTRVPAV--GRNMRIMSAAVDETETTTDAAVAE-DSIPIAVEIXXXXXDXLAAALEEGDEDANSIALEDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLSVDGDARKLVLSMRQKPRASSSEQGNVQKYADMLAEDPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMSPDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFG-------DRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQEEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLSMVPAGAYDDRRGGGKTKRGGYGGEGGRSTGRGRGAR*GEL-RFAWARRFRRPRAGVGEGGGGADWQQFLNNYFDDKE 2363
MRTV V+LP AV+LGLAGSS AFLQSVRPT FVVPAHKY+AAVSRTRA PA GR MRIMSAAVDETETT AA A + +XXXXX ++ A+E+ D+DA SIALEDIVVGEEYEGVINNVV+YGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVL+VDG+ARKLVLSMRQKPR+SS+EQGNVQKYADMLAEDPSQF+ AKVENIVSYGAFF L+DGCSGFVHISQMSP HV+DVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGE R+AP++ATKDVS G DPTEF+KG VSAV DYGLFVNIEGVDGLLHVSKMS DRS+TS+NIHS Y EGQEV +RI+EVN ANNKMSLSMLP TEEADFG+YT++ EEWLEGTVVSIM YGAFVRL G++DGMVHISQLDP GERVDSVYNSVEIGQ V+VRILEADPS++KLRL+MR+ YEG + + G DRRG KK K+VE++ ++S EEWISGRV+SITHFGAFV+VDD TDGLLHISQI E+HVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQ PRG+RGKKDVS+LL RDP+EFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMA GRVDSVED+CEMGQEV VRI+++NTDNNTVNLSMVPAGAYDDR GGG G +G EGGR GRG G + A+ R ADWQQFLNNYFDDKE
Sbjct: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLEEXXXXXPVXXXXXXPISPAMED-DDDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEG-FGAEGGR-RGRGGGXXXXXMDSAAFGREDFADTTQXXXXXXXADWQQFLNNYFDDKE 749
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 528 bits (1359), Expect = 1.010e-174 Identity = 325/755 (43.05%), Postives = 448/755 (59.34%), Query Frame = 3 Query: 141 MRTVCVSLPQAVLLGLAGSSRAFLQSVRPTRFVVPAHKYHAAVSRTRAVQTRVPAVGRNMRIMSAAVDETETTTDAAVAEDSIPIAVEIXXXXXDXLAAALEEGDEDANSIALEDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLSVDGDARKLVLSMRQKPRASSSEQ-GNVQKYADMLAEDPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMSPDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRD-----PSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQEEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGN--IDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLSMVPAGAYDDRRGGGKTKRGGYGGEGGRSTGRGRGAR*GELRFAWARRFRRPR------AGVGEGGGGADWQQFLNNYFDDKE 2363
MR V V L AVLLGL S AF + + VV H+ + A+S TR+ + + + V + ++A A ++ L D+VVG++YEGV++NV+SYGAFVDIG E NGLVHISQLAD FV+N + V EGD V V+VLS+D +KLVL+MR PRA+ +Q ++ YA++LA DP + +P VE++V YGAF L +GCSGF+HISQ+ P VS+VSDV+TVGQ V VR+R+VD+ L R+N+SLLP A +ATKDVS D F+ G VSAV DYG FV ++GVDGLLH+SK+ ++T + + + GQEVSVRIL V+ A NK+SL+M+ E D + SPEEW+EG+VVS TYGAFV L IDGMVHIS+L RVD+V + + +G AVKVR++E P+ +K+RLSMR+ + G +S RGA+ K V YA M +EEW+ G+V S T FGAFV++ DGLLH+S++ V +D L GQE++VRVI+VD + R+GLS+R+ R+ +D+S+L D F+PG V S+V YG FV ++ I+GL+H+S+++ RV+ V D+ G +V VR+ EV+ D VNLSM+P G+ DR + G G S G G R R+ RPR + + GGG ADWQ++LN YF+ K+
Sbjct: 1 MRCVSVPLQTAVLLGLVSGSAAFAFAPN-AKVVVHQHRLNRAISNTRS----------RLSVRMSTVAPADLADNSAAASKTL-----------------------------LADLVVGQQYEGVVSNVLSYGAFVDIGAEANGLVHISQLADAFVSNPTEIVAEGDSVSVKVLSIDQAEKKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSG-----ATSAAATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISELGEG--RVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARRAPV-----SRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRSRNARRGTGEDGAADDASDPFGTGER---------RKSPRPRFNDYEDSALNVGGGEADWQKYLNQYFEKKD 694
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 424 bits (1090), Expect = 5.720e-134 Identity = 288/790 (36.46%), Postives = 413/790 (52.28%), Query Frame = 3 Query: 141 MRTVCVSLPQAVLLGLAGSSRAF--LQSVRPTRFVVPAHKYHAAVSRTRAVQTRVPAVGRNMRIMSAAVDETETTTDAAVAEDSIPIAVEIXXXXXDXLAAALEEGDEDANSIALEDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLSVDGDARKLVLSMRQKPR--ASSSEQGNVQKYADMLAEDPSQFIPAKVENIVSYGAFFSLDDG------------CSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMSPDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGD----RRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQEEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQ-----------EMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIE--GNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLSMVPAGAYDDR--RGGGKTKRGGYGGEGGRS-TGRGRGAR*GELRFAWARRFRRPRAGVGEGGGGA-------------DWQQFLNNYFDDKE 2363
MR VSLP AVLLGL S F L S R VPA ++ AAVS +R RN R + + TE S+P+A +E L D+ +G Y+G++NNVV YG FVDIG VNGLVH SQL++ FV N + V +GD V VRV+ +D DAR+L LSMR R A + +V YA LA DP++FI V+ ++ GAF +L G GF+H SQ+ P V D D L+ GQ V VRIREVD +L RI++SLLP +G ++ SA +DVS+ G DP EF+ G V ++ +YG+FV ++GVDGLLH S++ R ++ + +++ GQ+VSVR+ V+ A N++SLSM+P D ++ ++ P+ W++G V + +GAFV + +DG+VHISQL + +V + V +G AV+VR++E DP + RRG VK V +Y E W+ G V+++ FGAFV++D DGL+H SQI ED L GQ V+VRV+ D + RL LSM +P + GS +DVS+L DP+ F+ G V S++P+G FV ++ G + GL+H+SE++ GRV+ V ++ G + VR+ EV+T ++LSM+ G+ DR RGGG +GG S TG G + R + PR + G DW+++LN YF K+
Sbjct: 1 MRCPRVSLPSAVLLGLVLRSHGFVVLSSTRQ-HIHVPARQHSAAVSCSRC--------SRNRRAVLMYISSTEAV--------SLPVA------------------EERPEKTKLSDLQLGVMYQGIVNNVVDYGVFVDIGASVNGLVHKSQLSNTFVTNPEKIVSQGDSVTVRVIGIDVDARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPERRXXXXXXXXXXXXXXXXXXXXXXXXXRRG---VKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQIC--GGGGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGS--------DGGSSRTGDGGADETDLFGGGSSARKKSPRPRFNDDGASXXXXXXXXXXXXEQDWRKYLNEYFAKKD 742
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A2N1PT36_9BACT (Uncharacterized protein n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PT36_9BACT) HSP 1 Score: 215 bits (548), Expect = 1.960e-55 Identity = 153/478 (32.01%), Postives = 243/478 (50.84%), Query Frame = 3 Query: 492 VGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLA-DEFVANCDDHVKEGDMVRVRVLSVDGDARKLVLSMRQKPRASSSEQGNVQKYADMLAEDP----------SQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVG--VDPTEFKKGIVSAVQDYGLFVNIE-GVDGLLHVSKMSPDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQEEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPR 1883
VG E EGV+ N+V+YGAFV+I + GLVH S ++ V N D VK G+ VRVRVL +D D +K+ L M+Q L DP + K+ N+VSYGAF L+ G G VH+S MS + V +++ G+ VDVRI E+D +I+ + AT D +G D E G V+ + ++G+FV +E G++GL+HVS +S + + N G EV V++L++ + K+SL + + + T E GTV ++ +GAFV L ++G+VHIS + E++D ++ ++V++LE + S KK+ L ++ + + EKY + + G V IT FGAFV ++D +GL+HISQ+ ++HV VED + IG ++V++IE+ D +L LS+R+ +E+ +
Sbjct: 339 VGTEVEGVVRNIVNYGAFVEIEPGLEGLVHHSDMSWTRRVNNPKDFVKSGEEVRVRVLEIDLDQKKISLGMKQ------------------LTPDPWDDIKIRYKVDDVVKGKITNVVSYGAFVELEPGLEGLVHVSDMSWTK-RVKHPDEIVRAGEDVDVRILEIDVDKRKISFGI-------------KQATADPWSIIGKSYDIGEIYTGKVTNITNFGIFVELEEGIEGLVHVSDISWTQKIV--NPAGVCAIGDEVKVKVLDIKPGDKKISLGIKQVSADPWSSVETEFKVGETYTGTVKNLTNFGAFVELKDGVEGLVHISDMSWT-EKIDHPSQILKSSDKIRVKVLEINTSDKKISLGLKQLVLDPWAV-------------FEEKYHEGMI---VDGEVLRITSFGAFVRIEDGIEGLVHISQLSDKHVEKVEDVVAIGDRIRVKIIEIKDDERKLRLSLRDADEEVSK 765
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A1V5US35_9BACT (30S ribosomal protein S1 n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5US35_9BACT) HSP 1 Score: 201 bits (512), Expect = 4.670e-51 Identity = 151/544 (27.76%), Postives = 275/544 (50.55%), Query Frame = 3 Query: 495 GEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKE-GDMVRVRVLSVDGDARKLVLSMRQKPRASSSEQGNVQKYADMLAEDPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMS-PDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTE--FKKGIVSAVQDYGLFVNIE-GVDGLLHVSKMSPDRSVTSDNIHSQYTE-GQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQ-EEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEV 2105
G G + + YGAF+DIG ++GL+HI+ ++ V+N D V G + +VL +D +K+ L ++Q + E G+ K ++ V+NI YG F +L+ G G +H+S +S R +D GQ + ++ +V+ ++ +I + + TKD + V E G + ++ +YG+FV +E G++G +H+S +S + + N S+ + G + V++L+++ K++L + + + E+ +EG V ++ +GAFV L I+G++HIS L +R++ ++ G VKV+I+E +P+ KK+ LS + + + S GA TVE G+++ FGAFV V++ +GLLH S + + S+ + L+ G+ ++V V+ +D DN ++ L +++ Q+ ++ D E + G+V SI YGAF+ + I+GL+HIS++A RVD VE++ + GQ+V V++ EV
Sbjct: 213 GSTVAGTVKSFTEYGAFIDIGG-IDGLLHITDMSYGHVSNPADVVSSIGSQITCKVLKLDRKTKKISLGLKQLSKNPWEEVGDKYKVGEIYE--------CTVKNIADYGVFATLEPGVDGLIHVSDLSWSGRTRPNDFKS----GQKIKAKVIDVNLEIKKIKLGI-------------KQVTKDPWEKVTETYPENTITNGKIKSILNYGVFVELEDGIEGFIHISNISWTKKI---NHPSELLKVGDSIEVKVLKLDLETKKINLGIKQTHVDPWTMVESKFKVEQIVEGKVTNVKKFGAFVELEEGIEGLIHISDLSWT-KRLNHANEMLKTGDPVKVKIIEINPAEKKIALSYKHLTKDPWSDIETRFPIGA----TVE------------GKITHFASFGAFVEVEEGVEGLLHTSDLAWNKKYSDPSEVLKEGETIKVLVLNIDKDNRKMSLGVKQLAQDPL--------IAYKEKMDSGEMLDGKVKSIQEYGAFIEFDDGIEGLIHISQLADERVDKVENVVKAGQQVKVKVIEV 702
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A5C5YTC5_9BACT (30S ribosomal protein S1 n=2 Tax=Posidoniimonas TaxID=2795979 RepID=A0A5C5YTC5_9BACT) HSP 1 Score: 190 bits (482), Expect = 5.920e-48 Identity = 158/586 (26.96%), Postives = 284/586 (48.46%), Query Frame = 3 Query: 429 LAAALEEGDEDANSIALEDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLSVDG-----DARKLVLSMRQKPRASSSEQGNVQKY-ADMLAEDPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIR----EVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMS------PDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQ-EEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLS 2135
+ L E ++A+ +A ED+ + + EG I V + VD+G + G+V S+ ++ D + G VRV V V+ D R +++ ++K ++K+ A M + + VE + G ++ G + F+ SQ+ R H +G+ +D I+ ++DE+ I +S + E A K ++ + +KG+V + D+G FV++ G+DGLLH++ MS P V D+ E+ V +L ++ K++L + T + GTVV++M+YGAFV+L I+G+VHIS++ R+ V I V+V +L + +++ L M+ Q+ + D K EKY + ++G+V ++T++GAF+ +++ DGLLH+S + VS+ + ++ GQEV+ +VI VD D R+ L +++ + P + I P + + G+V I +G FV +E ++GL+HISE+A +V++ ED+C +G E+ V+I V+TD+ + LS
Sbjct: 21 MGVGLLEAPDEADWLAGEDVSINQIVEGKIVRVDAEYVIVDVGYKSEGMVPRSEWEEDDENPADPDPEIGGTVRVLVEDVEDVVGRHDERGMIVLSKRKAE-------KIEKWMAVMESVHEGDVVTGTVERKIKGGLLVNI--GVNVFLPASQVDIRRPH--------DIGEYIDKEIQCIVLKIDEQRRNIVVSRRSLIEQE-------RAKKKAELLKELNVGDLRKGVVKNIADFGAFVDLGGIDGLLHITDMSWGRISHPSELVKIDD---------ELEVMVLHIDYEKEKIALGLKQKQPSPWDDVSTKYPVGSRVTGTVVNVMSYGAFVKLEDGIEGLVHISEMSWT-RRISHPSELVNIDDQVEVVVLGINEEKQEISLGMK------QTQDNPWD-------KVAEKYPP---GQLVTGKVRNLTNYGAFIEIEEGIDGLLHVSDMSWTRKVSHPSEVVEKGQEVECQVISVDTDRRRIALGLKQMEDD-PWAT------DIPSRYQPGQLVQGKVTKITNFGVFVGLEDGLEGLLHISELADEKVENPEDVCNVGDEIEVKILRVDTDDRKIGLS 549
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A3M1RCY3_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1RCY3_9BACT) HSP 1 Score: 188 bits (478), Expect = 2.960e-47 Identity = 153/566 (27.03%), Postives = 277/566 (48.94%), Query Frame = 3 Query: 480 EDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRV-------LSVDGDARKLVLSMRQKPRASSSEQGNVQKYADMLAEDPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMS------PDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQ-EEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLS 2135
E+I V EG I V VD+G + G++ +++ ++E ++ K GD + V V L D + LS R+ R + + + + E + KV + G +D G + F+ SQ+ R D+++ + + + + ++D+ I +S + E A K ++P + +KG+V + D+G FV++ G+DGLLH++ MS P V+ D+ E+ V IL+VN K++L + T ++GTVV++MTYGAFV+L I+G+VHIS++ +R++ V++G ++V +L D +++ L ++ Q+ + DR EKY + S + G V ++T++GAF+ +++ DGLLH+S + +S+ + LQ GQE++ RV+ VD + R+ L +++ ++ + I P + + G V I +G FV +E ++GL+HISE+A +VDS E++ ++G+E+ V+I V+TD + LS
Sbjct: 38 EEIAVNNIVEGKIVRVEKEFVVVDVGYKSEGIIPLNEWSEE-----EEPPKVGDTIEVLVEELESSFLDSDDYYGMITLSKRKAERIKAW-----MRVMESVKE--GDVVTGKVTRKIKGGLL--VDIGVNVFLPASQVDIRRPR--DIAEY--IDKEIQCVVLKIDQARRNIVVSRRALIEAE-------RAEKKAKLLAELEPGQIRKGVVKNIADFGAFVDLGGLDGLLHITDMSWGRIGHPSEMVSIDD---------EIEVVILDVNREKEKVALGLKQKTPSPWEDVEVKYPVGSRVKGTVVNVMTYGAFVKLEDGIEGLVHISEMSWT-KRINHPTEVVQVGDEIEVVVLRIDKEKQEISLGIK------QTQENPWDR-------AAEKYPEGSI---VKGVVRNLTNYGAFIELEEGIDGLLHVSDMSWTRKISHPSEILQRGQEIECRVLSVDQNRHRIALGLKQLTED-------PWEHDIPQRYAPGQIVKGTVTKITNFGVFVGLEDGLEGLLHISELADHKVDSPEEVVKVGEEIEVKILRVDTDERKIGLS 545
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A518DMP7_9BACT (30S ribosomal protein S1 n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DMP7_9BACT) HSP 1 Score: 187 bits (476), Expect = 5.730e-47 Identity = 160/566 (28.27%), Postives = 284/566 (50.18%), Query Frame = 3 Query: 474 ALEDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLSVDGDARKL-----VLSMRQKPRASSSEQGNVQKYADMLAE-DPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSL--LPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMSPDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSM---LPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQ-EEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLS 2135
A +DI + + EG I + +D+G + G + IS+ +E GD+V+V V ++ + +LS+ S ++ + K+ +M+ Q + V + G +D G S F+ SQ+ D D+ D +G+VV + ++DE I +S L Q E VR L ++ + + G+V + D+G FV++ G+DGLLH++ MS DR ++ QE+ V IL ++ K++L + +P+ + KY S + G VV++M+YGAFV+L I+G+VHIS++ +RV+ + V+IG + V IL D + ++L L M+ Q++P + D V+T+ ++G+V ++T++GAF+ +++ DGLLH+S + +S+ + L+ GQEV+ +V+ VD D R+ L +++ Q+ V I P + I G V +G FV +E ++GL+HISE+A +V++ E+I ++G E+ V+I V+T+ + LS
Sbjct: 40 ATDDIDLNQIVEGRIIRIADGAVLIDVGFKSEGTIDISEWDNEPTPQV------GDLVKVLVEDLEDETGATDDPFGMLSI------SKTKAEKILKWKEMMESVHEGQVVTGDVVRKIKGGLL--VDIGVSVFLPASQV--DIRRPGDIGDF--IGRVVQCEVLKIDETRRNIVVSRRSLIEKQREEVRTQLLQELEE---------GQVRPGVVKNIADFGAFVDLGGIDGLLHITDMSWDRI---NHPSEMVAIDQEIEVMILNIDREKQKIALGLKQKMPSPWDNVVEKYPVNSVHK---GEVVNVMSYGAFVKLEPGIEGLVHISEMSWV-KRVNHPSDLVDIGDMIDVMILGVDKAGQQLSLGMKQT----QANP-WDDVIHRYPVETI-----------VTGKVRNLTNYGAFIELEEGIDGLLHVSDMSWVRKISHPSEMLEKGQEVKCKVLNVDQDRRRIALGLKQLDQD-------PWSVDIPSKYQPGQVIKGVVTKTTNFGVFVGLEDGLEGLLHISELADHKVENPEEIVKVGDELEVKILRVDTEERKIGLS 548
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A2E3DKS4_9PLAN (30S ribosomal protein S1 (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DKS4_9PLAN) HSP 1 Score: 187 bits (475), Expect = 6.370e-47 Identity = 147/538 (27.32%), Postives = 267/538 (49.63%), Query Frame = 3 Query: 546 VDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLSVD------GDARKLVLSMRQKPRASSSEQGNVQKYADMLAEDPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMSPDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPEEWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQ-EEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLSM 2138
+D+G + G + +S+ +E ++ K GD V+V + V+ D +V ++K + ++K D Q + V + G +D G + F+ SQ+ D +D++D +GQ V+ + ++DE R N+ + E R A A + E +KG+V + D+G FV++ G+DGLLH++ MS +R + S QE+ V IL+++ K++L M + G ++G VV++M+YGAFV+L I+G+VHIS++ +R++ V+IG + V IL D ++L L M+ Q++P + VEK + S ++GRV ++T++GAF+ +++ DGLLH+S I + + + L+ QEV+ +V+ +D++ R+ L +++ + I P + I G V I +G F+ +E ++GL+HISEM G V+ E + ++GQE+ V++ V+T++ + LS+
Sbjct: 61 IDVGFKSEGSISLSEWGEE-----EEQPKVGDTVQVLIEEVEDEFGPANDPHGMVSLSKRKAEKILAWTAMMEKI------DEGQIVKGLVTRKIKGGLL--VDIGVNVFLPASQV--DIRRPNDIADY--IGQEVECEVLKIDE--ARRNIVVSRRSMIERQRRADREAL-----LAELSENELRKGVVKNIADFGAFVDLGGIDGLLHITDMSWERIGHPSEMVSI---DQEIEVMILKIDHEKEKIALGMKQKSANPWEGIEERYPVNTKVQGEVVNVMSYGAFVKLEAGIEGLVHISEMSWT-KRINHPNEMVQIGDEIDVVILSIDKGGQQLSLGMKQT----QANP----------WEEVEKRYPIDSV--VNGRVRNLTNYGAFIELEEGIDGLLHVSDISWTRKIGHPNEVLEKSQEVECKVLSMDIERRRIALGIKQLDAD-------PWTAEIPERYQPGQKITGNVTKITNFGVFIGLEDGLEGLLHISEMTDGEVEDPETLVQVGQEIEVKVLRVDTEDRKIGLSL 547
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Match: A0A5C5ZTU9_9BACT (30S ribosomal protein S1 n=1 Tax=Pseudobythopirellula maris TaxID=2527991 RepID=A0A5C5ZTU9_9BACT) HSP 1 Score: 187 bits (476), Expect = 6.860e-47 Identity = 167/612 (27.29%), Postives = 292/612 (47.71%), Query Frame = 3 Query: 423 DXLAAALEEGDEDANSIALEDIVVGEEYEGVINNVVSYGAFVDIGTEVNGLVHISQLADEFVAN---CDDHVKE------------------GDMVRVRVLSVD------GDARKLVLSMRQKPRASSSEQGNVQKYADMLAE-DPSQFIPAKVENIVSYGAFFSLDDGCSGFVHISQMSPDRGHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEPVRAAPLSATKDVSQFVGVDPTEFKKGIVSAVQDYGLFVNIEGVDGLLHVSKMS------PDRSVTSDNIHSQYTEGQEVSVRILEVNEANNKMSLSMLPATEEADFGKYTSISPE-EWLEGTVVSIMTYGAFVRLAGNIDGMVHISQLDPAGERVDSVYNSVEIGQAVKVRILEADPSTKKLRLSMRDPSYEGQSSPSFGDRRGAKKVKTVEKYADMSSEEWISGRVSSITHFGAFVSVDDVTDGLLHISQIQ-EEHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQEMPRGSRGKKDVSILLNRDPNEF-----IPGRVVSIVPYGAFVNIEGNIDGLVHISEMAAGRVDSVEDICEMGQEVMVRIAEVNTDNNTVNLS 2135
D L A +EE ++A+ + EDI V + EG I V +DIG + GLVH ++ EF N D E G VRV V V+ + LVLS R+ + ++K+ ++ + + KV + G +D G + F+ SQ+ R H D+ + L + ++ + ++DE+ I +S + E A K + + + G V + D+G FV++ G+DGLLH++ MS P V D+ E+ V IL ++ K++L + T + + K + P ++GTVV++M+YGAFV+L I+G+VHIS++ +R+ V+I V+V +L + +++ L M+ QS+P K EKY + ++GRV ++T++GAF+ +++ DGLLH+S + VS+ + ++ GQE++ +V+ VD D R+ L +++ D N PN + + G+V I +G FV +E ++GL+HISE+A G++++ E++C +G E+ V++ V++D + LS
Sbjct: 15 DDLIAVMEEAPDEASWLQGEDITVNKIVEGTIIRVDDEYVVIDIGYKSEGLVHRNEWEPEFDNNQYSSGDETAEXXXXXXXXXXXXXXXXXVGQKVRVLVEEVEEVSGRHDERGMLVLSKRKAEK--------IEKWLAVMDKVHEGDVVTGKVMRKIKGGLL--VDIGVNVFLPASQVDIRRPH--DIGEYLD--KEIECMVLKIDEERRNIVVSRRSLIEQE-------RAKKKAELLKHLSVGDLRTGQVKNIADFGAFVDLGGIDGLLHITDMSWGRISHPTEMVKIDD---------EIEVMILHIDYEKEKIALGLKQKT-ASPWEKVPATYPVGSRVKGTVVNVMSYGAFVKLEDGIEGLVHISEMSWT-KRISHPSELVQIDDEVEVVVLGINQEKQEISLGMKQT----QSNPWD---------KVAEKYPPGAQ---VTGRVRNLTNYGAFIEIEEGIDGLLHVSDMSWTRKVSHPSEAVEKGQEIECKVLSVDTDRRRIALGLKQ------------LDEDPWANDIPNRYQSGQLVKGKVTKITNFGVFVGLEDGLEGLLHISELADGKIENPEEVCSVGDELEVKVLRVDSDERKIGLS 566 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1002.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1002.132.1 >prot_P-lacustris_contig1002.132.1 ID=prot_P-lacustris_contig1002.132.1|Name=mRNA_P-lacustris_contig1002.132.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=702bp MRTVCVSLPQAVLLGLAGSSRAFLQSVRPTRFVVPAHKYHAAVSRTRAVQback to top mRNA from alignment at P-lacustris_contig1002:39668..54355+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1002.132.1 ID=mRNA_P-lacustris_contig1002.132.1|Name=mRNA_P-lacustris_contig1002.132.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=14688bp|location=Sequence derived from alignment at P-lacustris_contig1002:39668..54355+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1002:39668..54355+ >mRNA_P-lacustris_contig1002.132.1 ID=mRNA_P-lacustris_contig1002.132.1|Name=mRNA_P-lacustris_contig1002.132.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4212bp|location=Sequence derived from alignment at P-lacustris_contig1002:39668..54355+ (Pleurocladia lacustris SAG_25_93)back to top |