mRNA_P-wetherbeei_contig1627.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1627.3.1
Unique NamemRNA_P-wetherbeei_contig1627.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.160e-97
Identity = 151/196 (77.04%), Postives = 169/196 (86.22%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            MGI GLTKLL+DECP C+KE DL SL GRK+AIDASM MYQFL+AVRS  +G AA MLTN+AGEVTSHIQGMFNRTI+LL  G+KPVYVFDG+PPT+KGGELAKR AKR KAE D + A E+G   DVDK+SKRLV+V  QHNEDCKTLLRLMGVPVVDA  EAEAQCAALA+ GVV+GT TEDMDALTF+TPKL+
Sbjct:    1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGELAKRAAKRVKAETDWQDARENGTTEDVDKFSKRLVRVTTQHNEDCKTLLRLMGVPVVDASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLI 196
[Close]
BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.090e-95
Identity = 152/196 (77.55%), Postives = 170/196 (86.73%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            MGI GLTKLLSDE P CMKEVDL SL GRKVA+DASM MYQFL+AVRS G+GQ+ QMLTN+AGEVTSHIQGMFNRTIR+L++G+KP Y+FDG+PP +KGGELAKR AKR KAE +LK A E+    DVDK+SKRLV+V R HNEDCK LL LMGVPVV A SEAEAQCAALA+ GVVYGTATEDMDALTFQTPKL+
Sbjct:    1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQS-QMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLL 195
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7S3HJ83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ83_9STRA)

HSP 1 Score: 272 bits (696), Expect = 6.030e-90
Identity = 141/199 (70.85%), Postives = 165/199 (82.91%), Query Frame = 1 
Query:    1 TMGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQ--MLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            TMGI GL+KLL +ECP  +KE +L++  GRK+AIDASM MYQFLVAVRS+G G   Q  ML NDAGEVTSHIQGMFNRTIR++  G++PVYVFDG+PP MKGGELAKRLA+R KAE DL  A+++  V D++K+S RLVKV RQHNEDCK LLRLMGVPV++A  EAEAQCA LA+ G VY TATEDMDALTF+TPKLV
Sbjct:    5 TMGIHGLSKLLQEECPAAIKEHELENFTGRKIAIDASMAMYQFLVAVRSAGPGGGGQAAMLMNDAGEVTSHIQGMFNRTIRIMTGGVRPVYVFDGKPPQMKGGELAKRLARRAKAENDLALAKQAEDVEDINKFSSRLVKVTRQHNEDCKELLRLMGVPVINAPCEAEAQCAELARKGKVYATATEDMDALTFRTPKLV 203
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 268 bits (684), Expect = 4.970e-85
Identity = 138/197 (70.05%), Postives = 162/197 (82.23%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQ-GQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            MGI GL  L++DE PE  KE D+K+L+GRKVAIDASM +YQFL+AVRS+   G   QMLTN+AGEVTSHIQG+FNRTIR+L  G+KP YVFDG+PPT+K GELAKR   R KA+E+LK AEE     D+DKYSKRLVKV R+HNED K LLRLMGVPV++A  EAEAQCAALA+AG+V+ TATEDMDALTFQTP L+
Sbjct:   22 MGIHGLMNLVADEAPESCKEQDIKALVGRKVAIDASMALYQFLIAVRSAEHAGAVTQMLTNEAGEVTSHIQGLFNRTIRMLTNGVKPCYVFDGKPPTLKSGELAKRTKARTKAKEELKAAEEREDAEDIDKYSKRLVKVTREHNEDAKRLLRLMGVPVIEAPGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLL 218
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.540e-81
Identity = 131/196 (66.84%), Postives = 159/196 (81.12%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQ-GQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKL 588
            MGI GL KLL+DE P C+KE+ + +L GR VAIDASM +YQFLVAVRS+G+ G AAQMLTN+AGEVTSHIQGMFNRTIRL+  G+KPVYVFDG+PP MK GELAKR  +R+ A+E+LKTA E G V D+DK++KRLV+   QHNEDCK LL+LMGVP ++A  EAEA CAALA++  V+ + TEDMD +TF TP L
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGELAKRSERRQTAQENLKTATEEGNVEDIDKFNKRLVRATPQHNEDCKELLQLMGVPFINAPCEAEATCAALAKSNKVFASGTEDMDVMTFGTPVL 196
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7R9UCR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR1_9STRA)

HSP 1 Score: 253 bits (645), Expect = 6.350e-81
Identity = 129/196 (65.82%), Postives = 158/196 (80.61%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            MGI GLTKLL+DE P C+KE +L S  GRKVAIDASM +YQF++A+RS  +G AAQ+LTN+ GE+TSHIQG+FNRTIR+L  GIKPVYVFDG+PPT+K GELAKR+A+R++A+  L+ AE    V D +KY KRL +V R+H+ED   LLRLMGVPVV A  EAEAQCA LA+AG V+ T TEDMDAL F+TPKL+
Sbjct:    1 MGIKGLTKLLNDEAPGCIKEAELSSYTGRKVAIDASMALYQFIIAIRSGSEGFAAQVLTNEQGEITSHIQGIFNRTIRMLTNGIKPVYVFDGKPPTLKSGELAKRMARRQEAQSKLEAAES---VEDKEKYGKRLTRVTRKHSEDAMKLLRLMGVPVVQAPCEAEAQCAELARAGKVWATGTEDMDALCFRTPKLL 193
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA)

HSP 1 Score: 252 bits (643), Expect = 7.180e-80
Identity = 129/196 (65.82%), Postives = 157/196 (80.10%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQ-GQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKL 588
            MGI GL KLL+DE P C+KE+ + +L GR VAIDASM +YQFLVAVRS+G+ G AAQMLTNDAG+VTSHIQGMFNRTIRL+  G+KPVYVFDG+PP MKGGELAKR  +R+ A+++LKTA E G V D++K++KRLV+   QHN DCK LL LMGVP ++A  EAEA CAALA+   V+ + TEDMD +TF TP L
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGELAKRTERRQTAQDNLKTATEEGNVEDIEKFNKRLVRATPQHNNDCKELLALMGVPFINAPCEAEATCAALAKHNKVFASGTEDMDVMTFGTPVL 196
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BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A6T7HKT1_9STRA (Flap endonuclease 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HKT1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.520e-79
Identity = 135/198 (68.18%), Postives = 155/198 (78.28%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQG--QAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            MGI GL KLLSDE PEC++EV L SL GRK+AIDASM +YQFL+AVRSSG     AA MLTN  GE TSHIQG+FNRTIR L+EGI+PVYVFDG+PP +K GEL KR  KR+KA+  LK A+E G V + DK SKRLV+ G + NEDC  LL LMGVPVV A  EAEAQ +ALA+AG VY TATEDMDALTF+TP L+
Sbjct:    1 MGIKGLAKLLSDEAPECVREVPLSSLQGRKIAIDASMAIYQFLIAVRSSGNNPNMAAAMLTNAEGETTSHIQGLFNRTIRFLSEGIRPVYVFDGKPPNLKSGELVKRREKREKAQTALKNAQEDGNVEEQDKQSKRLVRAGTKENEDCIRLLNLMGVPVVRAPCEAEAQASALARAGTVYATATEDMDALTFRTPILL 198
[Close]
BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA)

HSP 1 Score: 249 bits (637), Expect = 6.470e-79
Identity = 128/196 (65.31%), Postives = 152/196 (77.55%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQA-AQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKL 588
            MGI GL KLL+DE P C+KE+ +  L GR VAIDASM +YQFL+AVRS+G G   AQMLTN+AGEVTSHIQGMFNRTIRL+  G+KPVYVFDG+PP MK GELAKR  +R++A+  LKTA E G   D+DK++KRLV+   QHNEDCK LL LMG+P + A  EAEA CAALA+AG V+   TEDMD +TF TP L
Sbjct:    1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKTATEEGNTEDIDKFTKRLVRATPQHNEDCKELLGLMGIPFLTAPCEAEATCAALAKAGKVFAAGTEDMDVITFGTPVL 196
[Close]
BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7S2EGZ9_9STRA (Flap endonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGZ9_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.350e-78
Identity = 134/196 (68.37%), Postives = 152/196 (77.55%), Query Frame = 1 
Query:    4 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 591
            MGI GL KLLSDE PEC+KEV L SL GRK+AIDASM +YQFL+AVRS G   AA MLTN  GE TSHIQG+FNRTIR L EGI+PVYVFDG+PP+ K GEL KR  KR+KAE  LK+A+E G V + +K SKRLV+ G + NEDC  LL LMGVPVV A  EAEAQ AALA+AG VY   TEDMDALTF+TP L+
Sbjct:    1 MGIKGLAKLLSDEAPECIKEVPLSSLHGRKIAIDASMAIYQFLIAVRSGGPNNAAAMLTNADGETTSHIQGLFNRTIRFLTEGIRPVYVFDGKPPSFKSGELLKRREKREKAELALKSAKEEGNVEEEEKQSKRLVRAGTKENEDCIKLLTLMGVPVVRAPCEAEAQAAALARAGTVYACGTEDMDALTFRTPILL 196
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z748_9STRA2.160e-9777.04Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
D7FLF9_ECTSI2.090e-9577.55Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A7S3HJ83_9STRA6.030e-9070.85Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2SD31_9STRA4.970e-8570.05Flap endonuclease 1 n=1 Tax=Rhizochromulina marina... [more]
A0A6G0WCI0_9STRA3.540e-8166.84Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches ... [more]
A0A7R9UCR1_9STRA6.350e-8165.82Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W4FTR5_9STRA7.180e-8065.82Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=1008... [more]
A0A6T7HKT1_9STRA2.520e-7968.18Flap endonuclease 1 n=1 Tax=Attheya septentrionali... [more]
A0A1V9YW30_9STRA6.470e-7965.31Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=... [more]
A0A7S2EGZ9_9STRA1.350e-7868.37Flap endonuclease 1 n=2 Tax=Ditylum brightwellii T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1627contigP-wetherbeei_contig1627:5688..6814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FLF9
Preferred nameFEN1
PFAMsXPG_I,XPG_N
Model size591
Max annot lvl2759|Eukaryota
KEGG koko:K04799
KEGG Pathwayko03030,ko03410,ko03450,map03030,map03410,map03450
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000287,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000731,GO:0000734,GO:0000737,GO:0001302,GO:0001654,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004523,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006284,GO:0006286,GO:0006302,GO:0006303,GO:0006308,GO:0006309,GO:0006310,GO:0006312,GO:0006401,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006921,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0007275,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0007568,GO:0007569,GO:0007610,GO:0007611,GO:0007613,GO:0008150,GO:0008152,GO:0008219,GO:0008297,GO:0008309,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009987,GO:0010564,GO:0010638,GO:0012501,GO:0016043,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016796,GO:0016888,GO:0016891,GO:0016893,GO:0016895,GO:0017108,GO:0018130,GO:0019438,GO:0019439,GO:0019725,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022616,GO:0030145,GO:0030154,GO:0030262,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032505,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034655,GO:0035312,GO:0035753,GO:0035822,GO:0035861,GO:0042592,GO:0043010,GO:0043137,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043570,GO:0043596,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045145,GO:0045165,GO:0045787,GO:0045876,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0048256,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051128,GO:0051130,GO:0051276,GO:0051716,GO:0051726,GO:0051908,GO:0051983,GO:0051984,GO:0060041,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090734,GO:0097159,GO:0097194,GO:0098501,GO:0098502,GO:0104004,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902969,GO:1903047,GO:1903469,GO:1904162,GO:2001252
Exons4
Evalue3.29e-96
EggNOG OGsCOG0258@1|root,KOG2519@2759|Eukaryota
Descriptionendonuclease activity
Cds size588
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186081.4477756-UTR-P-wetherbeei_contig1627:5687..56901683186081.4477756-UTR-P-wetherbeei_contig1627:5687..5690Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1627 5688..5690 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186081.4596148-CDS-P-wetherbeei_contig1627:5690..58191683186081.4596148-CDS-P-wetherbeei_contig1627:5690..5819Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1627 5691..5819 +
1683186081.4687123-CDS-P-wetherbeei_contig1627:5944..61181683186081.4687123-CDS-P-wetherbeei_contig1627:5944..6118Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1627 5945..6118 +
1683186081.4775083-CDS-P-wetherbeei_contig1627:6278..64521683186081.4775083-CDS-P-wetherbeei_contig1627:6278..6452Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1627 6279..6452 +
1683186081.4860458-CDS-P-wetherbeei_contig1627:6703..68141683186081.4860458-CDS-P-wetherbeei_contig1627:6703..6814Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1627 6704..6814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1627.3.1prot_P-wetherbeei_contig1627.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1627 5691..6814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1627.3.1

>prot_P-wetherbeei_contig1627.3.1 ID=prot_P-wetherbeei_contig1627.3.1|Name=mRNA_P-wetherbeei_contig1627.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSG
QGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGG
ELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLL
RLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV
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mRNA from alignment at P-wetherbeei_contig1627:5688..6814+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1627.3.1 ID=mRNA_P-wetherbeei_contig1627.3.1|Name=mRNA_P-wetherbeei_contig1627.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1127bp|location=Sequence derived from alignment at P-wetherbeei_contig1627:5688..6814+ (Phaeothamnion wetherbeei SAG_119_79)
ACCATGGGCATCACCGGATTAACCAAGCTGCTCTCCGACGAGTGCCCGGA
GTGCATGAAGGAGGTCGATCTCAAATCGCTGATCGGGCGGAAGGTCGCGA
TTGACGCCTCGATGCAGATGTACCAATTCCTTGTGAGTACTATGCGTCAC
ATCTAGCGCTCCCACGCCCCGTCACCTGCCGCATTACGCGATTTCCTTTT
TTCCCGGATTCAAATCTGGACTCTCATCTTCCCGCCCTTTTCGTCTCTCC
AAAACAGGTGGCCGTGCGCTCGAGTGGACAGGGCCAGGCGGCGCAAATGC
TCACGAACGACGCCGGGGAGGTGACCTCTCACATCCAGGGCATGTTTAAC
CGCACCATCCGCCTCCTCGCCGAGGGCATCAAGCCCGTGTACGTCTTCGA
CGGGCGGCCGCCGACCATGAAGGGCGGCGAAGTGAGCGCGATGGAATGGC
TGCGAAAGACGAGAACGGTTGGACGAGGCGCGCTAGCTCTGACGTTTTTC
CTGTTCTGCTTTTCCTTACTACATGCCGTCAGAGCAAGGTCTTTGATACC
GTATTTGCCAATTTGTTCCTTCCTTTGGACTCGCCCGGCAGCTCGCCAAG
CGGCTGGCGAAGCGGAAGAAGGCGGAGGAGGACCTGAAAACGGCCGAGGA
GTCGGGCGTGGTCGGCGACGTCGACAAGTACAGCAAGCGGCTCGTCAAGG
TCGGCCGGCAGCACAACGAGGATTGCAAGACGCTGCTGCGCCTCATGGGC
GTCCCCGTCGTCGATGTGAGCGCCCTAACTTTCGCCCACTGAAACCTACC
AATTCTCTTCCAGAGCACTCGCCTCAATTTTTGCCGTCGCCCGCTTCCAC
CCTCGCCGTCACCTGGCAGCAGCTAGAATTTACACATCTCGACGCAGTGC
TGTTTCCTGAACAGATGGCAGCACTCACACAATCCAGCGAAACCCGTCGC
TTCACACCCGGCATCCGCCAGCTCCCTTCTCATTCCCCCTCTGAACCTCC
CTGATTGCCCTGACAGGCCCTTTCGGAGGCGGAGGCCCAGTGCGCGGCTC
TGGCGCAGGCCGGCGTCGTGTACGGCACCGCTACGGAGGACATGGACGCC
CTCACTTTCCAGACGCCCAAGCTCGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1627:5688..6814+

>mRNA_P-wetherbeei_contig1627.3.1 ID=mRNA_P-wetherbeei_contig1627.3.1|Name=mRNA_P-wetherbeei_contig1627.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig1627:5688..6814+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCATCACCGGATTAACCAAGCTGCTCTCCGACGAGTGCCCGGAGTG
CATGAAGGAGGTCGATCTCAAATCGCTGATCGGGCGGAAGGTCGCGATTG
ACGCCTCGATGCAGATGTACCAATTCCTTGTGGCCGTGCGCTCGAGTGGA
CAGGGCCAGGCGGCGCAAATGCTCACGAACGACGCCGGGGAGGTGACCTC
TCACATCCAGGGCATGTTTAACCGCACCATCCGCCTCCTCGCCGAGGGCA
TCAAGCCCGTGTACGTCTTCGACGGGCGGCCGCCGACCATGAAGGGCGGC
GAACTCGCCAAGCGGCTGGCGAAGCGGAAGAAGGCGGAGGAGGACCTGAA
AACGGCCGAGGAGTCGGGCGTGGTCGGCGACGTCGACAAGTACAGCAAGC
GGCTCGTCAAGGTCGGCCGGCAGCACAACGAGGATTGCAAGACGCTGCTG
CGCCTCATGGGCGTCCCCGTCGTCGATGCCCTTTCGGAGGCGGAGGCCCA
GTGCGCGGCTCTGGCGCAGGCCGGCGTCGTGTACGGCACCGCTACGGAGG
ACATGGACGCCCTCACTTTCCAGACGCCCAAGCTCGTG
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