prot_P-wetherbeei_contig1627.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig1627.3.1
Unique Name	prot_P-wetherbeei_contig1627.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	196

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.070e-97
Identity = 151/196 (77.04%), Postives = 169/196 (86.22%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GLTKLL+DECP C+KE DL SL GRK+AIDASM MYQFL+AVRS  +G AA MLTN+AGEVTSHIQGMFNRTI+LL  G+KPVYVFDG+PPT+KGGELAKR AKR KAE D + A E+G   DVDK+SKRLV+V  QHNEDCKTLLRLMGVPVVDA  EAEAQCAALA+ GVV+GT TEDMDALTF+TPKL+
Sbjct:    1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGELAKRAAKRVKAETDWQDARENGTTEDVDKFSKRLVRVTTQHNEDCKTLLRLMGVPVVDASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLI 196

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.010e-95
Identity = 152/196 (77.55%), Postives = 170/196 (86.73%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GLTKLLSDE P CMKEVDL SL GRKVA+DASM MYQFL+AVRS G+GQ+ QMLTN+AGEVTSHIQGMFNRTIR+L++G+KP Y+FDG+PP +KGGELAKR AKR KAE +LK A E+    DVDK+SKRLV+V R HNEDCK LL LMGVPVV A SEAEAQCAALA+ GVVYGTATEDMDALTFQTPKL+
Sbjct:    1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQS-QMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLL 195

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7S3HJ83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ83_9STRA)

HSP 1 Score: 270 bits (691), Expect = 3.340e-89
Identity = 140/198 (70.71%), Postives = 164/198 (82.83%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQ--MLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GL+KLL +ECP  +KE +L++  GRK+AIDASM MYQFLVAVRS+G G   Q  ML NDAGEVTSHIQGMFNRTIR++  G++PVYVFDG+PP MKGGELAKRLA+R KAE DL  A+++  V D++K+S RLVKV RQHNEDCK LLRLMGVPV++A  EAEAQCA LA+ G VY TATEDMDALTF+TPKLV
Sbjct:    6 MGIHGLSKLLQEECPAAIKEHELENFTGRKIAIDASMAMYQFLVAVRSAGPGGGGQAAMLMNDAGEVTSHIQGMFNRTIRIMTGGVRPVYVFDGKPPQMKGGELAKRLARRAKAENDLALAKQAEDVEDINKFSSRLVKVTRQHNEDCKELLRLMGVPVINAPCEAEAQCAELARKGKVYATATEDMDALTFRTPKLV 203

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 268 bits (684), Expect = 4.780e-85
Identity = 138/197 (70.05%), Postives = 162/197 (82.23%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQ-GQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GL  L++DE PE  KE D+K+L+GRKVAIDASM +YQFL+AVRS+   G   QMLTN+AGEVTSHIQG+FNRTIR+L  G+KP YVFDG+PPT+K GELAKR   R KA+E+LK AEE     D+DKYSKRLVKV R+HNED K LLRLMGVPV++A  EAEAQCAALA+AG+V+ TATEDMDALTFQTP L+
Sbjct:   22 MGIHGLMNLVADEAPESCKEQDIKALVGRKVAIDASMALYQFLIAVRSAEHAGAVTQMLTNEAGEVTSHIQGLFNRTIRMLTNGVKPCYVFDGKPPTLKSGELAKRTKARTKAKEELKAAEEREDAEDIDKYSKRLVKVTREHNEDAKRLLRLMGVPVIEAPGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLL 218

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.400e-81
Identity = 131/196 (66.84%), Postives = 159/196 (81.12%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQ-GQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKL 195
            MGI GL KLL+DE P C+KE+ + +L GR VAIDASM +YQFLVAVRS+G+ G AAQMLTN+AGEVTSHIQGMFNRTIRL+  G+KPVYVFDG+PP MK GELAKR  +R+ A+E+LKTA E G V D+DK++KRLV+   QHNEDCK LL+LMGVP ++A  EAEA CAALA++  V+ + TEDMD +TF TP L
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGELAKRSERRQTAQENLKTATEEGNVEDIDKFNKRLVRATPQHNEDCKELLQLMGVPFINAPCEAEATCAALAKSNKVFASGTEDMDVMTFGTPVL 196

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7R9UCR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR1_9STRA)

HSP 1 Score: 253 bits (645), Expect = 6.110e-81
Identity = 129/196 (65.82%), Postives = 158/196 (80.61%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GLTKLL+DE P C+KE +L S  GRKVAIDASM +YQF++A+RS  +G AAQ+LTN+ GE+TSHIQG+FNRTIR+L  GIKPVYVFDG+PPT+K GELAKR+A+R++A+  L+ AE    V D +KY KRL +V R+H+ED   LLRLMGVPVV A  EAEAQCA LA+AG V+ T TEDMDAL F+TPKL+
Sbjct:    1 MGIKGLTKLLNDEAPGCIKEAELSSYTGRKVAIDASMALYQFIIAIRSGSEGFAAQVLTNEQGEITSHIQGIFNRTIRMLTNGIKPVYVFDGKPPTLKSGELAKRMARRQEAQSKLEAAES---VEDKEKYGKRLTRVTRKHSEDAMKLLRLMGVPVVQAPCEAEAQCAELARAGKVWATGTEDMDALCFRTPKLL 193

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.910e-80
Identity = 129/196 (65.82%), Postives = 157/196 (80.10%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQ-GQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKL 195
            MGI GL KLL+DE P C+KE+ + +L GR VAIDASM +YQFLVAVRS+G+ G AAQMLTNDAG+VTSHIQGMFNRTIRL+  G+KPVYVFDG+PP MKGGELAKR  +R+ A+++LKTA E G V D++K++KRLV+   QHN DCK LL LMGVP ++A  EAEA CAALA+   V+ + TEDMD +TF TP L
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGELAKRTERRQTAQDNLKTATEEGNVEDIEKFNKRLVRATPQHNNDCKELLALMGVPFINAPCEAEATCAALAKHNKVFASGTEDMDVMTFGTPVL 196

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A6T7HKT1_9STRA (Flap endonuclease 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HKT1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.420e-79
Identity = 135/198 (68.18%), Postives = 155/198 (78.28%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQG--QAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GL KLLSDE PEC++EV L SL GRK+AIDASM +YQFL+AVRSSG     AA MLTN  GE TSHIQG+FNRTIR L+EGI+PVYVFDG+PP +K GEL KR  KR+KA+  LK A+E G V + DK SKRLV+ G + NEDC  LL LMGVPVV A  EAEAQ +ALA+AG VY TATEDMDALTF+TP L+
Sbjct:    1 MGIKGLAKLLSDEAPECVREVPLSSLQGRKIAIDASMAIYQFLIAVRSSGNNPNMAAAMLTNAEGETTSHIQGLFNRTIRFLSEGIRPVYVFDGKPPNLKSGELVKRREKREKAQTALKNAQEDGNVEEQDKQSKRLVRAGTKENEDCIRLLNLMGVPVVRAPCEAEAQASALARAGTVYATATEDMDALTFRTPILL 198

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA)

HSP 1 Score: 249 bits (637), Expect = 6.230e-79
Identity = 128/196 (65.31%), Postives = 152/196 (77.55%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQA-AQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKL 195
            MGI GL KLL+DE P C+KE+ +  L GR VAIDASM +YQFL+AVRS+G G   AQMLTN+AGEVTSHIQGMFNRTIRL+  G+KPVYVFDG+PP MK GELAKR  +R++A+  LKTA E G   D+DK++KRLV+   QHNEDCK LL LMG+P + A  EAEA CAALA+AG V+   TEDMD +TF TP L
Sbjct:    1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKTATEEGNTEDIDKFTKRLVRATPQHNEDCKELLGLMGIPFLTAPCEAEATCAALAKAGKVFAAGTEDMDVITFGTPVL 196

[Close]

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Match: A0A7S2EGZ9_9STRA (Flap endonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGZ9_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.300e-78
Identity = 134/196 (68.37%), Postives = 152/196 (77.55%), Query Frame = 0

Query:    1 MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSGQGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGGELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLLRLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV 196
            MGI GL KLLSDE PEC+KEV L SL GRK+AIDASM +YQFL+AVRS G   AA MLTN  GE TSHIQG+FNRTIR L EGI+PVYVFDG+PP+ K GEL KR  KR+KAE  LK+A+E G V + +K SKRLV+ G + NEDC  LL LMGVPVV A  EAEAQ AALA+AG VY   TEDMDALTF+TP L+
Sbjct:    1 MGIKGLAKLLSDEAPECIKEVPLSSLHGRKIAIDASMAIYQFLIAVRSGGPNNAAAMLTNADGETTSHIQGLFNRTIRFLTEGIRPVYVFDGKPPSFKSGELLKRREKREKAELALKSAKEEGNVEEEEKQSKRLVRAGTKENEDCIKLLTLMGVPVVRAPCEAEAQAAALARAGTVYACGTEDMDALTFRTPILL 196

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1627.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z748_9STRA	2.070e-97	77.04	Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=...	[more]
D7FLF9_ECTSI	2.010e-95	77.55	Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A7S3HJ83_9STRA	3.340e-89	70.71	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7S2SD31_9STRA	4.780e-85	70.05	Flap endonuclease 1 n=1 Tax=Rhizochromulina marina...	[more]
A0A6G0WCI0_9STRA	3.400e-81	66.84	Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches ...	[more]
A0A7R9UCR1_9STRA	6.110e-81	65.82	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
W4FTR5_9STRA	6.910e-80	65.82	Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=1008...	[more]
A0A6T7HKT1_9STRA	2.420e-79	68.18	Flap endonuclease 1 n=1 Tax=Attheya septentrionali...	[more]
A0A1V9YW30_9STRA	6.230e-79	65.31	Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=...	[more]
A0A7S2EGZ9_9STRA	1.300e-78	68.37	Flap endonuclease 1 n=2 Tax=Ditylum brightwellii T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..122
None	No IPR available	GENE3D	3.40.50.1010		coord: 2..196 e-value: 2.2E-64 score: 219.1
None	No IPR available	PANTHER	PTHR11081:SF9	FLAP ENDONUCLEASE 1	coord: 1..196
None	No IPR available	CDD	cd09867	PIN_FEN1	coord: 4..196 e-value: 2.2063E-103 score: 296.233
IPR006084	XPG/Rad2 endonuclease	PRINTS	PR00853	XPGRADSUPER	coord: 28..42 score: 48.54 coord: 150..167 score: 55.03 coord: 86..105 score: 52.66 coord: 171..191 score: 44.49
IPR006084	XPG/Rad2 endonuclease	PANTHER	PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	coord: 1..196
IPR006086	XPG-I domain	SMART	SM00484	xpgineu	coord: 151..196 e-value: 1.5E-5 score: 34.4
IPR006086	XPG-I domain	PFAM	PF00867	XPG_I	coord: 154..196 e-value: 2.7E-14 score: 53.4
IPR006085	XPG, N-terminal	SMART	SM00485	xpgn3	coord: 1..112 e-value: 7.3E-49 score: 178.3
IPR006085	XPG, N-terminal	PFAM	PF00752	XPG_N	coord: 1..112 e-value: 3.5E-27 score: 94.8
IPR019974	XPG conserved site	PROSITE	PS00841	XPG_1	coord: 84..98
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 2..195

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1627	contig	P-wetherbeei_contig1627:5691..6814 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1627.3.1	mRNA_P-wetherbeei_contig1627.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig1627 5688..6814 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig1627.3.1 ID=prot_P-wetherbeei_contig1627.3.1|Name=mRNA_P-wetherbeei_contig1627.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
MGITGLTKLLSDECPECMKEVDLKSLIGRKVAIDASMQMYQFLVAVRSSG
QGQAAQMLTNDAGEVTSHIQGMFNRTIRLLAEGIKPVYVFDGRPPTMKGG
ELAKRLAKRKKAEEDLKTAEESGVVGDVDKYSKRLVKVGRQHNEDCKTLL
RLMGVPVVDALSEAEAQCAALAQAGVVYGTATEDMDALTFQTPKLV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006084	XPG/Rad2
IPR006086	XPG-I_dom
IPR006085	XPG_DNA_repair_N
IPR019974	XPG_CS
IPR029060	PIN-like_dom_sf