prot_P-wetherbeei_contig161.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig161.2.1
Unique Nameprot_P-wetherbeei_contig161.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length473
Homology
BLAST of mRNA_P-wetherbeei_contig161.2.1 vs. uniprot
Match: D8LES5_ECTSI (UVR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES5_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.910e-30
Identity = 120/418 (28.71%), Postives = 179/418 (42.82%), Query Frame = 0
Query:    2 SPDGSLVAFAVLTLTPDGGKVESSRLMIVEEAMGTRVASARLQHPPFHLEWTPDGRGLTLLCDDGEGLAQLMEVRLDLTYAAAAASGDCAAENGVGDDGGSERGPKLT-ARALDRGGPLYYAVVAGRDCSDGATSPAIVAHNGARGGTSYWREDLGAWRRIAAAGRGGCAGAEAE-DTATSPLGYRPQYRAPQPHRAGGAPAVLYVE------GGWLISARVDGTAVRWLTPAMGHCTLAVSPDSRRAVMLDNDPVTDHFSLALISG-EGALDPAGGGSSNGMTARKDADSSSAGVLLEEIPLDRAVIGFWWAPDSSKLLILASHLPRGATXXXXXXXXXXXXXXGLRCQWLVYDCAGRGGGEGLLRPYGGFEFSPRPYGSKVYLAHFDQTYSALSPWAPDSRAFAYAGMAGAFVQRL 410
            SPDG +VAF+VL     G  +ES+++++  E+ G+ V    +   PF L                            L  AA                    + P  T  R L +G PL+YA          + +  +V H   R     +  D+               G E +  T  + L     + AP  H  GG  AV+ VE      G  L+S RVDG+A + + P  G  T  VSPD +R  ++  D  T  ++++++ G EGALDP                 S+A +   EIPLDR ++ F+++PDS+KLL LA+ + +                  L+ QW++YDC  R     LL      EFSPRP+  K+YL +FD      +PWAPDS++F+Y     +FVQ +
Sbjct:  338 SPDGKMVAFSVLKAGSGGAPIESAKILVYRES-GSLVLDVGVPRAPFLLMXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAAA--------------------KTPYRTKTRGLAQGNPLFYAYT-----KKDSRNADMVVHTANR----VYHLDM-------------TTGDEVDISTRAAQL-----FMAPSTHCEGGEDAVILVETDGDESGQHLVSGRVDGSAKKRICPTRGFSTFGVSPDGQRLCLMQQDMTTGFYTISVLEGGEGALDPL----------------STATMEQVEIPLDRVIMAFFFSPDSTKLLCLATKMSKSELAVARSSMRLGFQ---LKFQWVIYDCETRD--VQLLD-----EFSPRPFFLKMYLPYFDMFAQGFTPWAPDSKSFSYVSAEASFVQEV 681          
BLAST of mRNA_P-wetherbeei_contig161.2.1 vs. uniprot
Match: A0A6H5KL47_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL47_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 9.260e-14
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 0
Query:  188 YRAPQPHRAGGAPAVLYVE------GGWLISARVDGTAVRWLTPAMGHCTLAVSPDSRRAVMLDNDPVTDHFSLALISG-EGALDPAGGGSSNGMTARKDADSSSAGVLLEEIPLDRAVIGFWWAPDSSKLLILAS 316
            + AP  H  GG  AV+ VE      G  L+SARVDG+A + + P  G  T  VSPD +R  ++  D  T  ++++++ G EGALDP                 S+A +   EIPLDR ++ F+++PDS+KLL LA+
Sbjct:  888 FMAPSTHCEGGEDAVILVETDGDESGQHLVSARVDGSAKKRICPTRGFSTFGVSPDGQRLCLMQQDMTTGFYTISVLEGGEGALDPL----------------STATMEQVEIPLDRVIMAFFFSPDSTKLLCLAT 1007          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig161.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LES5_ECTSI1.910e-3028.71UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KL47_9PHAE9.260e-1438.24Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 2..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig161contigP-wetherbeei_contig161:3930..5348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig161.2.1mRNA_P-wetherbeei_contig161.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig161 3339..5865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig161.2.1 ID=prot_P-wetherbeei_contig161.2.1|Name=mRNA_P-wetherbeei_contig161.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=473bp
MSPDGSLVAFAVLTLTPDGGKVESSRLMIVEEAMGTRVASARLQHPPFHL
EWTPDGRGLTLLCDDGEGLAQLMEVRLDLTYAAAAASGDCAAENGVGDDG
GSERGPKLTARALDRGGPLYYAVVAGRDCSDGATSPAIVAHNGARGGTSY
WREDLGAWRRIAAAGRGGCAGAEAEDTATSPLGYRPQYRAPQPHRAGGAP
AVLYVEGGWLISARVDGTAVRWLTPAMGHCTLAVSPDSRRAVMLDNDPVT
DHFSLALISGEGALDPAGGGSSNGMTARKDADSSSAGVLLEEIPLDRAVI
GFWWAPDSSKLLILASHLPRGATTAAAAAASVRAGGGGLRCQWLVYDCAG
RGGGEGLLRPYGGFEFSPRPYGSKVYLAHFDQTYSALSPWAPDSRAFAYA
GMAGAFVQRLVAADDAGVAAASAATIASASSAATAVTAGAGTVAAVAATD
VDVPPPIALSRSAELVGWAGRR*
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