prot_P-wetherbeei_contig16096.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16096.1.1
Unique Nameprot_P-wetherbeei_contig16096.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length61
Homology
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A067CE67_SAPPC (DNA polymerase kappa n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE67_SAPPC)

HSP 1 Score: 94.4 bits (233), Expect = 4.130e-21
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFIG+KLCPEL+F PPD  KY+A AEV R IFA+YDP+F + S+DEAYLD+T+ CL R
Sbjct:  136 MPGFIGKKLCPELVFVPPDMAKYAAVAEVTRRIFAEYDPQFAAASMDEAYLDITDVCLAR 195          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: T0RCX8_SAPDV (DNA polymerase kappa n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RCX8_SAPDV)

HSP 1 Score: 90.9 bits (224), Expect = 6.880e-20
Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFIG+KLCP L+F PPD  KY+A A+V R IFA+YDP+F + S+DEAYLD+T+ CL R
Sbjct:  136 MPGFIGKKLCPALVFVPPDMAKYAAVADVTRRIFAEYDPQFAAASMDEAYLDITDVCLAR 195          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A835CGI0_9FABA (DNA polymerase kappa n=1 Tax=Senna tora TaxID=362788 RepID=A0A835CGI0_9FABA)

HSP 1 Score: 84.0 bits (206), Expect = 1.500e-18
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +++ R +F +YDP F + SLDEAYLD+T  C ER
Sbjct:   45 MPGFIARKLCPELIFVPTDFKKYTYFSDLTRKVFQRYDPNFLAASLDEAYLDITEVCKER 104          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A2N9EKM8_FAGSY (DNA polymerase kappa n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EKM8_FAGSY)

HSP 1 Score: 85.1 bits (209), Expect = 1.800e-18
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +++ R +F +YDP F + SLDEAYLD+T+ C ER
Sbjct:  165 MPGFIARKLCPELIFVPVDFKKYTYCSDLTRKVFQKYDPNFMAASLDEAYLDITDVCKER 224          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A7J0FA73_9ERIC (DNA polymerase kappa n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0FA73_9ERIC)

HSP 1 Score: 86.7 bits (213), Expect = 1.810e-18
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +++ R +F  YDP F + SLDEAYLD+TN C ER
Sbjct:  152 MPGFIARKLCPELIFVPVDFKKYTHYSDLTRKVFQNYDPNFMAASLDEAYLDITNACYER 211          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A2R6R1Z4_ACTCC (DNA polymerase kappa n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6R1Z4_ACTCC)

HSP 1 Score: 86.7 bits (213), Expect = 2.120e-18
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +++ R +F  YDP F + SLDEAYLD+TN C ER
Sbjct:  152 MPGFIARKLCPELIFVPVDFKKYTHYSDLTRKVFQNYDPNFMAASLDEAYLDITNACYER 211          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A835W128_CHLIN (DNA polymerase kappa n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W128_CHLIN)

HSP 1 Score: 86.3 bits (212), Expect = 2.910e-18
Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCC 57
            MPGFIG++LCP+L+F  PDF KY+AAAEVVRG F Q DP+F S  LDEA+LD+T+ C
Sbjct:  185 MPGFIGKRLCPKLVFIKPDFAKYTAAAEVVRGAFRQLDPDFESGGLDEAFLDVTDYC 241          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A6N2LUS9_SALVM (DNA polymerase kappa n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LUS9_SALVM)

HSP 1 Score: 85.5 bits (210), Expect = 4.140e-18
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +E+ R +F +YDP F + SLDEAYLD+T  C ER
Sbjct:  136 MPGFIARKLCPELIFVPTDFKKYTHYSELTRKVFEKYDPNFMAASLDEAYLDITEVCKER 195          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A438GAE1_VITVI (DNA polymerase kappa n=3 Tax=Vitis TaxID=3603 RepID=A0A438GAE1_VITVI)

HSP 1 Score: 84.0 bits (206), Expect = 4.230e-18
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +++ R +F +YDP F + SLDEAYLD+T  C ER
Sbjct:  177 MPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVCNER 236          
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Match: A0A6N2N8D9_SALVM (DNA polymerase kappa n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2N8D9_SALVM)

HSP 1 Score: 85.5 bits (210), Expect = 5.260e-18
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAYLDLTNCCLER 60
            MPGFI +KLCPELIF P DFKKY+  +E+ R +F +YDP F + SLDEAYLD+T  C ER
Sbjct:  145 MPGFIARKLCPELIFVPTDFKKYTHYSELTRKVFEKYDPNFMAASLDEAYLDITEVCKER 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16096.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067CE67_SAPPC4.130e-2168.33DNA polymerase kappa n=2 Tax=Saprolegnia parasitic... [more]
T0RCX8_SAPDV6.880e-2065.00DNA polymerase kappa n=1 Tax=Saprolegnia diclina (... [more]
A0A835CGI0_9FABA1.500e-1861.67DNA polymerase kappa n=1 Tax=Senna tora TaxID=3627... [more]
A0A2N9EKM8_FAGSY1.800e-1861.67DNA polymerase kappa n=1 Tax=Fagus sylvatica TaxID... [more]
A0A7J0FA73_9ERIC1.810e-1863.33DNA polymerase kappa n=1 Tax=Actinidia rufa TaxID=... [more]
A0A2R6R1Z4_ACTCC2.120e-1863.33DNA polymerase kappa n=1 Tax=Actinidia chinensis v... [more]
A0A835W128_CHLIN2.910e-1866.67DNA polymerase kappa n=1 Tax=Chlamydomonas incerta... [more]
A0A6N2LUS9_SALVM4.140e-1863.33DNA polymerase kappa n=1 Tax=Salix viminalis TaxID... [more]
A0A438GAE1_VITVI4.230e-1861.67DNA polymerase kappa n=3 Tax=Vitis TaxID=3603 RepI... [more]
A0A6N2N8D9_SALVM5.260e-1863.33DNA polymerase kappa n=1 Tax=Salix viminalis TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1170.60coord: 1..17
e-value: 2.3E-14
score: 55.5
NoneNo IPR availablePANTHERPTHR11076:SF33DNA POLYMERASE KAPPAcoord: 1..60
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 1..60
IPR001126UmuC domainPFAMPF00817IMScoord: 4..56
e-value: 1.1E-10
score: 41.6
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 1..55
score: 13.49369
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 18..57
e-value: 2.3E-14
score: 55.5
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16096contigP-wetherbeei_contig16096:560..982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16096.1.1mRNA_P-wetherbeei_contig16096.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16096 560..1447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16096.1.1 ID=prot_P-wetherbeei_contig16096.1.1|Name=mRNA_P-wetherbeei_contig16096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=61bp
MPGFIGQKLCPELIFCPPDFKKYSAAAEVVRGIFAQYDPEFRSFSLDEAY
LDLTNCCLERV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf