mRNA_P-wetherbeei_contig16018.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: A0A835YSC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC0_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.490e-69 Identity = 144/293 (49.15%), Postives = 177/293 (60.41%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLLAAAGAGAGAQLQGMAQV----------------------QAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCR-------------------AFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGL-------------GQTSLEQIFNFFAGQQQEESEAAPG 1019
+ GVDP+ARR MW VI+RIVT N++CALVLTTHSMEEAEALCQRIG+MVGGRL+CLGS+QHLKSRFG G+QLE T A PT +AA Q L A+AG G QA G++P L E+ DG G+LL+QEL+++G++ DVA W + E CR A AF++ FAGAQL EKQGGK+R LPPQ+G +LG IFGL+E++R L + DY L GQTSLEQIFN FA +Q EE+ APG
Sbjct: 2084 STGVDPVARRHMWEVISRIVTTNKQCALVLTTHSMEEAEALCQRIGIMVGGRLQCLGSAQHLKSRFGSGYQLEVTAALPTSAAASAAAQSLCASAGVAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKQALRGSYPALESEISQDGRGSLLWQELLAEGSIQTQDVAEWALQESACRKSRVXXXXXXXXXXXXXXNAILAFIARHFAGAQLLEKQGGKLRLALPPQEGMTLGAIFGLIEDSRAELGIGDYALXXXXXXXXXXXXXGQTSLEQIFNGFAAKQAEETSDAPG 2376
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK) HSP 1 Score: 240 bits (612), Expect = 1.470e-67 Identity = 133/246 (54.07%), Postives = 174/246 (70.73%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLL----AAAGAGAGAQL--QGMAQVQAALGTFP-ELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DP+ARRFMW+VI +I T+ ++CA++LTTHSMEE EALC RIG+MVGGRLRCLGS+Q LKSRFG GFQLE L P+ EE+A +R+ AAA GA +L Q A V AALG P + P+ G+G LLY EL+++G +A D+ A+ E R +AFV+ F GA L+EKQ GK+RF+ PPQ G +LGE+FG +E+ R +L V +Y L QT+LEQ+FNFFAGQQ+EE+ A G
Sbjct: 1719 STGMDPVARRFMWDVITKISTERQQCAVILTTHSMEECEALCTRIGIMVGGRLRCLGSAQRLKSRFGLGFQLELGLRLPSEEELADGLRRVAEGAPAAAAGGAAQRLAQQDFAPVLAALGADPAQWLPKFCETGAGALLYHELLARGGVALGDLVAFHARERRAAQAEAFVADTFKGAVLREKQSGKLRFEYPPQPGLALGEMFGALEDRRAQLGVEEYALSQTTLEQVFNFFAGQQEEETGRAAG 1964
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI) HSP 1 Score: 236 bits (602), Expect = 3.180e-66 Identity = 129/241 (53.53%), Postives = 164/241 (68.05%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLLAAAGAGAG--AQLQGMAQVQAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DPMARR MWN I RIVTQNR CA++LTTHSMEE EALCQRIG+MVGGR+RCLGSSQHLK+RFG+GFQLEA + + +I A + A G A ++L G A A PE APE+ +G G ++Y L ++ T+ A D AAW LE+ C AFV + F GA+L+EKQ KMRF++P Q+ ++LG +FG +E++ L V +Y L Q SLEQIFN FA QQQEE A G
Sbjct: 1729 STGMDPMARRMMWNYIMRIVTQNRSCAMILTTHSMEECEALCQRIGIMVGGRMRCLGSSQHLKTRFGKGFQLEARVGAVSPTDIDAMLATIAPATGGQASLPSELCGPALDAA---QCPEFAPEITAEGRGAMVYHALANERTVLARDFAAWLCLEQSCSRVIAFVESSFKGARLREKQNAKMRFEIPQQEDKTLGAMFGFIEDSAAELGVGEYSLSQISLEQIFNGFASQQQEEQGRAAG 1966
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI) HSP 1 Score: 235 bits (599), Expect = 7.990e-66 Identity = 126/240 (52.50%), Postives = 163/240 (67.92%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLLAAA-GAGAGAQLQGMAQVQAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DPMARRFMWNVI RIVT+N+ECA++LTTHSMEE EALCQRIG+MVGGRLRCLG+SQHLK+RFG+GFQLEA + T EE A L A G G G+ + A PEL E+ G G +Y + ++G ++ D+AAW +E++C AF+ FAGA L+EKQ KMRF+ PPQ+ ++L ++FG +E R L + +Y L QTSLEQ+FN FA QQ+EE A G
Sbjct: 1707 STGMDPMARRFMWNVIMRIVTENKECAMILTTHSMEECEALCQRIGIMVGGRLRCLGTSQHLKTRFGKGFQLEARVKAITHEETDAMMATLAHATNGQGTLTNDGGVLRAALAAAQAPELEAEVSPTGRGASIYHAIANQGGVSVRDLAAWICVEKKCSRVIAFMQQHFAGAALREKQNAKMRFEFPPQKNQTLAQMFGFIENERDSLFIGEYALSQTSLEQVFNGFAAQQEEELGHAAG 1946
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI) HSP 1 Score: 233 bits (594), Expect = 3.730e-65 Identity = 123/240 (51.25%), Postives = 163/240 (67.92%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLLAAA-GAGAGAQLQGMAQVQAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DPMARRFMWNVI RIVT+N+ECA++LTTHSMEE EALCQRIG+MVGGRLRCLG+SQHLK+RFG+GFQLEA + EE A L A G G G+ + A P+L E+ G G +Y + ++G + D+AAW +E++C AF+ +FAGA ++EKQ KMRF+ PPQ+ ++L ++FG++E R L + +Y L QTSLEQ+FN FA QQ+EE A G
Sbjct: 1727 STGMDPMARRFMWNVIMRIVTENKECAMILTTHSMEECEALCQRIGIMVGGRLRCLGTSQHLKTRFGKGFQLEARVKAILPEETDAMMAELAPATNGQGTLGNDGGVLRAALAAAQAPDLEAEVSATGRGASIYHAIANQGGVPVRDLAAWICVEKKCSKVIAFMQQQFAGAVMREKQNAKMRFEFPPQKNQTLAQMFGVVENEREALCIGEYALSQTSLEQVFNGFAAQQEEELGHAAG 1966
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: A0A6H5JVX0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX0_9PHAE) HSP 1 Score: 219 bits (558), Expect = 6.020e-63 Identity = 132/288 (45.83%), Postives = 166/288 (57.64%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEA-----------------------------------------------TLAYPTGEEIAAAEQRLLAAAGAGAG--AQLQGMAQVQAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DPMARR MWN I RIVTQNR CA++LTTHSMEE EALCQRIG+MVGGR+RCLGSSQHLK+RFG+GFQLEA +L ++I A + A G A ++L G A A PELAPE+ +G G ++Y L ++ T+ A D AAW LE+ C AFV + F GA+L+EKQ KMRF++P Q+ ++LG +FG +E+N L V +Y L Q SLEQIFN FA QQQEE A G
Sbjct: 301 STGMDPMARRMMWNYIMRIVTQNRSCAMILTTHSMEECEALCQRIGIMVGGRMRCLGSSQHLKTRFGKGFQLEARVGAVSPTVSWSWAATTARKALSHRMKYFGIQSQQYCRLPFYNNPVLSLFLEKPQDIDAMLATIATATGGQASLPSELCGPALDAA---QCPELAPEITPEGRGAMVYHALANERTVLARDFAAWLCLEQSCSRVIAFVESSFKGARLREKQNAKMRFEIPQQEDKTLGAMFGFIEDNAAELGVGEYSLSQISLEQIFNGFASQQQEEQGRAAG 585
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: A0A6V1S0H3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S0H3_HETAK) HSP 1 Score: 207 bits (528), Expect = 2.540e-61 Identity = 118/241 (48.96%), Postives = 155/241 (64.32%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLLAAAGAGAGAQLQGMAQVQAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGR--SLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DP+ARRFMW VI RI T+ ++ A++LTTHSMEE EALC RIG+MVGG+LRCLGS+QHLKSRFG G+QLE T EE+A A ++L A G + QL G A + G + E GS L EL KG ++A ++AAW +L+ R RA A+V F GA L+E+Q G+ RF++P + G + +F +E R L + +Y L QTSLEQIFNFFA QQ+EE A G
Sbjct: 61 STGMDPVARRFMWEVITRISTERQQAAIILTTHSMEECEALCTRIGIMVGGQLRCLGSAQHLKSRFGLGYQLELGARTATAEELATATEKLQAEGGQLSEGQL-GAALQRLGYGEDYDWRTEFLPSGSAATLGHELAVKGAVSAEELAAWALLDGRVRALHAWVGRAFEGAVLRERQAGRARFEVPHRAGGRGGMAGMFAALEGQREALGIEEYALSQTSLEQIFNFFASQQEEEKGKAEG 300
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: K8YZT2_NANGC (Antibiotic transport system ATP-binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YZT2_NANGC) HSP 1 Score: 202 bits (514), Expect = 2.500e-56 Identity = 116/267 (43.45%), Postives = 167/267 (62.55%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAE----------QRLLAAAGAGAGAQLQG-----------MAQVQAALGTFPELA--PEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQ-----GRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
++G+D +ARRFMW VI+ I T+ EC ++LTTHSMEE EALC RIG+MVGGR RC+GS+QHLKSR+G G+QLE ++A P GE + A++ +R++ A A+L+G M Q++ AL + A + G+G ++Q + + G++ + A WC LE+R + F+ + A L+E+QG K+RF++P + R L E+FGL+E+N+ RL V DY + QTSLEQIFNFFAGQQ+EE A G
Sbjct: 309 SSGMDAVARRFMWKVISDITTKRGECCVILTTHSMEECEALCTRIGIMVGGRFRCMGSAQHLKSRYGMGYQLEISVALPRGEIVPASDDEDSGDETEGKRMVLPADDTFLARLEGAAARLSTERFTMPQLEIALAAIDKAAWLEVISPTGTGADVWQTVTASGSIGVREFAGWCSLEDRMESILRFIMDNYPDAVLRERQGTKVRFEIPSKDTNTGAARKLSEMFGLIEDNKGRLHVEDYSVCQTSLEQIFNFFAGQQEEEKGPAAG 575
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE) HSP 1 Score: 204 bits (520), Expect = 2.040e-55 Identity = 114/240 (47.50%), Postives = 152/240 (63.33%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAEQRLLAAA-GAGAGAQLQGMAQVQAALGTFPELAPEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQGRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
+ G+DPMARRFMWNVI RIVT+N+ECA++LTTHSMEE EALCQRIG+MVGGRLRCLG+SQHLK+RFG+GFQLEA + EE A L +A G G G+ + A PEL E+ G G +Y + ++G + D+AAW +E++C AF+ +FAGA ++EKQ KMRF+ PPQ+ ++L ++FG++E +FN FA QQ+EE A G
Sbjct: 840 STGMDPMARRFMWNVIMRIVTENKECAMILTTHSMEECEALCQRIGIMVGGRLRCLGTSQHLKTRFGKGFQLEARVKAILPEETDAMMTELASATNGQGTLGNDGGVLRAALAAAQAPELEAEVSPTGRGASIYHAIANQGGVPVRDLAAWICVEKKCSKVIAFMQQQFAGAVMREKQNAKMRFEFPPQKNQTLAQMFGVVE--------------------VFNGFAAQQEEELGHAAG 1059
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Match: A0A4D9DBM5_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBM5_9STRA) HSP 1 Score: 202 bits (514), Expect = 7.860e-55 Identity = 116/267 (43.45%), Postives = 167/267 (62.55%), Query Frame = 3
Query: 303 TAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRIGVMVGGRLRCLGSSQHLKSRFGQGFQLEATLAYPTGEEIAAAE----------QRLLAAAGAGAGAQLQG-----------MAQVQAALGTFPELA--PEMRIDGSGTLLYQELVSKGTLAAADVAAWCVLEERCRAFQAFVSAEFAGAQLQEKQGGKMRFDLPPQQ-----GRSLGEIFGLMEENRLRLSVNDYGLGQTSLEQIFNFFAGQQQEESEAAPG 1019
++G+D +ARRFMW VI+ I T+ EC ++LTTHSMEE EALC RIG+MVGGR RC+GS+QHLKSR+G G+QLE ++A P GE + A++ +R++ A A+L+G M Q++ AL + A + G+G ++Q + + G++ + A WC LE+R + F+ + A L+E+QG K+RF++P + R L E+FGL+E+N+ RL V DY + QTSLEQIFNFFAGQQ+EE A G
Sbjct: 627 SSGMDAVARRFMWKVISDITTKRGECCVILTTHSMEECEALCTRIGIMVGGRFRCMGSAQHLKSRYGMGYQLEISVALPRGEIVPASDDEDSGGETEGKRMVLPADDTFLARLEGAAARLSTERFTMPQLEIALAAIDKAAWLEVISPTGTGADVWQTVTASGSIGVREFAGWCSLEDRVESILRFIMDNYPDAVLRERQGTKVRFEIPSKDTNTGAARKLSEMFGLIEDNKGRLHVEDYSVCQTSLEQIFNFFAGQQEEEKGPAAG 893 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16018.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16018.1.1 >prot_P-wetherbeei_contig16018.1.1 ID=prot_P-wetherbeei_contig16018.1.1|Name=mRNA_P-wetherbeei_contig16018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp MPFFLCTAGVDPMARRFMWNVINRIVTQNRECALVLTTHSMEEAEALCQRback to top mRNA from alignment at P-wetherbeei_contig16018:1..1418- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16018.1.1 ID=mRNA_P-wetherbeei_contig16018.1.1|Name=mRNA_P-wetherbeei_contig16018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1418bp|location=Sequence derived from alignment at P-wetherbeei_contig16018:1..1418- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16018:1..1418- >mRNA_P-wetherbeei_contig16018.1.1 ID=mRNA_P-wetherbeei_contig16018.1.1|Name=mRNA_P-wetherbeei_contig16018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig16018:1..1418- (Phaeothamnion wetherbeei SAG_119_79)back to top |