prot_P-wetherbeei_contig16.7.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16.7.1
Unique Nameprot_P-wetherbeei_contig16.7.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length812
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 17..61
e-value: 2.0E-4
score: 30.7
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 22..55
e-value: 1.1E-5
score: 25.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 22..52
score: 9.677
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 20..52
e-value: 5.078E-8
score: 47.6581
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 21..83
e-value: 4.3E-7
score: 32.2
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 13..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 574..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16contigP-wetherbeei_contig16:16747..19601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16.7.1mRNA_P-wetherbeei_contig16.7.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16 16120..20396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16.7.1 ID=prot_P-wetherbeei_contig16.7.1|Name=mRNA_P-wetherbeei_contig16.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=812bp
MLNCVQIQNAYLKKGKRYQRLSCVRCVRLKRPCDGNKPTCQRCAQTGRHC
HYATTHKRPHPSPGPNEAGAPALVAAAAVERVSFSASSAIGLTGVQQRYL
QSFLACFGEMIPFGVAPSGLVAAIVDSPATASVGSSGDGGGGSRGFGSWN
GGGNGSSRGNGSARDLLRQGTGYGVLAVGALLSGECTDPGESAALILRAN
LCMQRALEVEDLDRDGSNARGGGGGGGSAGGDGGSGGSDAGGEGGSSGSR
GSANCGSGNVELSNDSSNDGGFGCSGGNGGYSDDCNGGNVHIGESGSSHI
RSIASVSTAAAGNGCNSGGGGRPSDGVQLRSWPGGTGVALLSSAEASADF
SPDLPTSVLLCVCQLLEALRHLFSGSYSLFEECLQYAIESFRMVQWGIND
DNGGPNTVVADTTVAASVAAHTEALSAAAAESRCRLGAVLMIFQITGAYG
YSENPCRAPAREMEPLAAVRRRRGRLTLAEAAASPLPWLGPPSSYSNDPG
VEVSGRSRSALGILTVLNAIMEPNSTRMVVGRPGAGGVEFGGCGDAGRAG
ERGRFSAGSNRDAALGTAAAAAGSGSSSSGGDDVDGNSIGNGRGDRIGGD
DGGGSGCGSDGGRASFGGKGDDAGGPSSGEVDERAMVALSQWCFATAVEM
AAEGGGIFLLLVSTSLRNFLMTRLEYSMERSRRAAAAWNGLFPLLSHCPG
VVLVVPAAPARFRLLAKLHDDVVGDSYRSFCNCWNTCQRNTGGILTEVMP
PQAPLTHETIRAEVEQLNPFYQRIVRKSLEWNVAASAALAASATTSAAAG
AANTAAAAVLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf