prot_P-wetherbeei_contig15802.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15802.2.1
Unique Nameprot_P-wetherbeei_contig15802.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length118
Homology
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BLAST of mRNA_P-wetherbeei_contig15802.2.1 vs. uniprot
Match: A0A6M5YPG3_9BACT (Uncharacterized protein n=2 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YPG3_9BACT)

HSP 1 Score: 224 bits (572), Expect = 1.480e-72
Identity = 108/118 (91.53%), Postives = 114/118 (96.61%), Query Frame = 0 
Query:    1 LAFSRDGSRLAVRRDQQIRVYETGGKTLAAVPFPRTDLHRTVPVLPRPGRAPVPHVAFSPDGGQVAVGHGRALAVHHAVTGEGRFHHGELPDEVTGVAFAPGGRWLYVGRRDGSLVPY 118
            LAFSRDG+RLAVRRDQQIR+YETGGKTLAAVPFPRTD++RTVPV+PRPGRAP P VAFSPDGGQVAVG+GRALAVHHAVTGEGRFH GELPDEVTGVAFAPGGRWLYVGRRDGSLV Y
Sbjct:   69 LAFSRDGARLAVRRDQQIRIYETGGKTLAAVPFPRTDIYRTVPVIPRPGRAPAPQVAFSPDGGQVAVGYGRALAVHHAVTGEGRFHDGELPDEVTGVAFAPGGRWLYVGRRDGSLVAY 186
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15802.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6M5YPG3_9BACT1.480e-7291.53Uncharacterized protein n=2 Tax=Frigoriglobus tund... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..116
e-value: 6.2E-13
score: 50.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 86..115
e-value: 0.0085
score: 16.9
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15802contigP-wetherbeei_contig15802:1220..1573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15802.2.1mRNA_P-wetherbeei_contig15802.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15802 1220..1573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15802.2.1 ID=prot_P-wetherbeei_contig15802.2.1|Name=mRNA_P-wetherbeei_contig15802.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
LAFSRDGSRLAVRRDQQIRVYETGGKTLAAVPFPRTDLHRTVPVLPRPGR
APVPHVAFSPDGGQVAVGHGRALAVHHAVTGEGRFHHGELPDEVTGVAFA
PGGRWLYVGRRDGSLVPY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat