mRNA_P-wetherbeei_contig15599.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A2D7FHK3_9HYPH (Biotin_lipoyl_2 domain-containing protein n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FHK3_9HYPH) HSP 1 Score: 144 bits (362), Expect = 2.350e-40 Identity = 83/151 (54.97%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 118 GQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASVTQR 570
G++S+Q+TGERS RV+ + VRVGDRVKKGD++A+L+T LEADR +A+ AL E++A V VA+S + A+L R+ L+ S S+ R+ FEDAEV LR++++ L++A+ A +R+AEV R LEIRLA I APYDG+V I NVGA+VTQR
Sbjct: 2 GKVSSQLTGERSVRVKELNVRVGDRVKKGDIIAKLSTEQLEADRKVAEGALAEAKALVTVAESRITGAKLVLGRQERLRKSTSFQRSAFEDAEVALRSAEASLRSAKGVAAQRQAEVERIALEIRLANIVAPYDGIVKSINANVGAAVTQR 152
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A1H3VHY7_9RHOB (RND family efflux transporter, MFP subunit n=1 Tax=Rubrimonas cliftonensis TaxID=89524 RepID=A0A1H3VHY7_9RHOB) HSP 1 Score: 90.1 bits (222), Expect = 6.290e-18 Identity = 67/181 (37.02%), Postives = 102/181 (56.35%), Query Frame = 1
Query: 31 GLALALVVGVASQRVEAEVVE------GKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGA 555
GLA GV V+ ++E G+LVA R ++A+ G V + VRVGDRV++GD+LAR++T LE +A AL ++ AS E A++ VA A +R + L+GS +++ FED EL ++SR+ A + R A+VA+ E ++ A +AP+DGVV+E GA
Sbjct: 21 GLAQDRPAGVVVDAVDVRMLEETAPVLGRLVAATRSVVAARTAGV----VAAAPVRVGDRVRRGDLLARIDTERLEIAERVAGAALAQAEASREAAQADVALAAQALERISGLRGSSAFSSGAFEDRRTELARARSRVGAAAAXXERARADVAQAEYDLAYAATRAPFDGVVIERSAQPGA 197
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: UPI0016724CF4 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI0016724CF4) HSP 1 Score: 86.3 bits (212), Expect = 1.430e-16 Identity = 56/147 (38.10%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 88 VEGKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVV 528
V G+LVA Q G ++A++ ++RV+ V V+VGDRV++GDVLA+L+ E++R + A+E +RA+V ++ +A+AR DR+ LKGS +Y + EDA+ ++ +QS L +E++ A++ E+ + ++APYDGVV
Sbjct: 49 VLGRLVARQSGVVAARV----AERVDRVQVQVGDRVQRGDVLAKLSDDRAESERRLRAAAVEAARAAVGRDRATLAKARQALDRQEQLKGSTAYRKDRAEDAQRDVEIAQSTLSRSEADLAAATAQLNLAEIALVDTSVRAPYDGVV 191
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A7C5PT63_9HYPH (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C5PT63_9HYPH) HSP 1 Score: 85.9 bits (211), Expect = 2.040e-16 Identity = 58/156 (37.18%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 88 VEGKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGA 555
V G+LVA Q G ++AQ+ G V +LV VGD VKKGD++A L+T + +A R + + ESRA++ AK+ + ARL+ +R+ LK + ++NRA FE + + + L A + ++A +A ++EI A + +PYD VV+E T G+
Sbjct: 52 VIGRLVARQSGDVAAQVDGA----VRRILVEVGDHVKKGDIIALLDTETRKARRDVLVAGIAESRAALAAAKADLELARLNMERQGKLKKTGAFNRALFETTQQAFAKAGAELARAHAAIAAKKASLALIDVEIDRARVTSPYDAVVVERKTEAGS 203
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A3D2BUU6_9PROT (HlyD_D23 domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BUU6_9PROT) HSP 1 Score: 84.0 bits (206), Expect = 1.530e-15 Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 70 RVEAEVVE---------GKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASVT 564
RV+A +VE G+LVA + G ++A++ G V S+ +GDRVKKGDVLA + L A R AL RA V+ AK+ ++ + R A+LK S +++RA +ED + ++ A + L S +AE+ + +++ EI+APYDGVV E T VGA V+
Sbjct: 120 RVDAVIVEPLSQTSPVIGRLVASRTGDVAARINGA----VVSMPTSIGDRVKKGDVLATIALERLTAKRDKYAAALSTRRAMVQSAKAEYSKKNQELRRMANLKKSSAFSRARYEDLQRDVEARSAALVERRSQLKEAQAELDQAAIDLYNGEIRAPYDGVVSEKHTEVGAYVS 289
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A8U2X1_9PROT (Efflux transporter, RND family, MFP subunit n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8U2X1_9PROT) HSP 1 Score: 80.5 bits (197), Expect = 1.830e-14 Identity = 62/175 (35.43%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 49 VVGVASQRVE--AEVVE--GKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASV 561
VVGV R E ++ ++ G+LVA Q G ++A++ ++RV V V+VGDRVK+GDVLARL L ++RL+ ++E +RA+V R+ LKGS +Y + EDA+ ++ +Q+ L ++++A A++ ++ + A ++APYDGVV T GA V
Sbjct: 42 VVGVDPVRAEPLSQTIDVLGRLVARQNGMVAARV----AERVAIVEVQVGDRVKRGDVLARLADDRLSSERLLRVASVEAARAAVARDXXXXXXXXXXXXRQDQLKGSTAYRKDRTEDAQRDVEIAQAALTRSQADATAATAQLELADIAVTDATVRAPYDGVVTIKHTTAGAYV 212
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A8G2F0E2_9PROT (RND family efflux transporter, MFP subunit n=2 Tax=Thalassobaculum TaxID=526215 RepID=A0A8G2F0E2_9PROT) HSP 1 Score: 76.6 bits (187), Expect = 4.150e-13 Identity = 54/158 (34.18%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 88 VEGKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASV 561
V G+ VA Q G ++A++ ++RV+ V V+VGD+VK+GDV+ARL++ L A+RL + + + + + ++ +A+A+ DR L+ S ++ EDAE ++ A ++ L+ AE++A A++ E+ ++ A I APYDGVV + G+ V
Sbjct: 52 VLGRFVARQSGVLAARV----AERVDEVAVQVGDQVKRGDVIARLSSDRLAAERLRTEAQAKAAESDITAERANLAKAQQTLDRLNKLRSSSAHRPDRVEDAERDVEAHRAALRAAEADAAVARAQLDLAEIALQDAAITAPYDGVVTVKHVSAGSYV 205
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: UPI0019F23E7C (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F23E7C) HSP 1 Score: 74.3 bits (181), Expect = 2.600e-12 Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 88 VEGKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASV 561
V G+ VA Q G ++A ++G VE +LV VGDRV KGDVL RL+T +R + + L E +A + A++ + A+ + R SLK S ++++A +ED E+ QS + EL+++ AEIKAPY+GVV+ GA V
Sbjct: 37 VIGRFVARQAGPVAALVSGP----VEEILVDVGDRVAKGDVLVRLSTDITVGNRNLREAELSEKKARLGSARAQLRLAKQELARIESLKKSAAFSQASYEDKRAEVARYQSSXXXXXXXXXXXXXXLELSELDMKRAEIKAPYNGVVVARQAVAGAYV 190
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A2E8R3B5_9PROT (HlyD_D23 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E8R3B5_9PROT) HSP 1 Score: 73.9 bits (180), Expect = 3.710e-12 Identity = 60/196 (30.61%), Postives = 105/196 (53.57%), Query Frame = 1
Query: 1 MFANSKSAFQGLALALVVGVASQRVEAEVVE---------GKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASV 561
+FA A G+ AL A+ V+A VE G+LVA Q G ++A++ G V + V VGDRVK+GDVLA L++ L+ R + E+ A +++A++ +A R + R L+ S ++++ ED+ ++ +++ + A + R A +A E+++R A+++APY GV+ T G+ V
Sbjct: 13 LFALGAFALXGVQXALAQHAAAVGVDAVRVEPLSQTIPVIGRLVAKQSGIVAARIGGP----VADMRVSVGDRVKEGDVLAILDSTRLKRQRALLVAETAETEAQIKLAEAQLALRRQELSRLEGLRDSAAFSKGRXEDSRQQVVVAEASIGAAMARHERALANLALAEIDLRNAQVRAPYAGVITLEQTETGSFV 204
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Match: A0A2D8PRT2_9PROT (HlyD_D23 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PRT2_9PROT) HSP 1 Score: 73.9 bits (180), Expect = 4.670e-12 Identity = 58/158 (36.71%), Postives = 87/158 (55.06%), Query Frame = 1
Query: 88 VEGKLVADQRGQISAQMTGERSQRVESVLVRVGDRVKKGDVLARLNTVSLEADRLIAQRALEESRASVEVAKSVVARARLDYDRRASLKGSPSYNRAGFEDAEVELRASQSRLQNAESNANRREAEVARCELEIRLAEIKAPYDGVVLEIMTNVGASV 561
V G+LVA Q G ++A++ G V S+ VGDRVKKG+V+A L L A R AL RA V+VA++ ++ + R A+L+ S +++RA FED E + A ++ L S + +++ + I+APYDGVV + T VGA V
Sbjct: 135 VIGRLVARQSGDVAARINGA----VVSMPTAVGDRVKKGEVIATLAQERLTAKRDKYAAALTTRRAMVQVAQAEYSKKNQELRRMANLRKSSAFSRARFEDLERDAEARRASLTERRSXXXXXXXXXXQATIDLYNSNIRAPYDGVVSQKHTEVGAYV 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15599.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15599.1.1 >prot_P-wetherbeei_contig15599.1.1 ID=prot_P-wetherbeei_contig15599.1.1|Name=mRNA_P-wetherbeei_contig15599.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=190bp MFANSKSAFQGLALALVVGVASQRVEAEVVEGKLVADQRGQISAQMTGERback to top mRNA from alignment at P-wetherbeei_contig15599:2..571- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15599.1.1 ID=mRNA_P-wetherbeei_contig15599.1.1|Name=mRNA_P-wetherbeei_contig15599.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=570bp|location=Sequence derived from alignment at P-wetherbeei_contig15599:2..571- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15599:2..571- >mRNA_P-wetherbeei_contig15599.1.1 ID=mRNA_P-wetherbeei_contig15599.1.1|Name=mRNA_P-wetherbeei_contig15599.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=570bp|location=Sequence derived from alignment at P-wetherbeei_contig15599:2..571- (Phaeothamnion wetherbeei SAG_119_79)back to top |