mRNA_P-wetherbeei_contig1549.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: A0A0D9V7U5_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9V7U5_9ORYZ) HSP 1 Score: 87.8 bits (216), Expect = 1.970e-18 Identity = 72/165 (43.64%), Postives = 91/165 (55.15%), Query Frame = 1
Query: 1 MGSVFGRTGISVENGLSPKYFTLAQRAGYEARWYNPYIVAEV----AMSEGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVM----EVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
MG V G+ I+VE +PK+ + AGYE R Y P +VAEV A +G+ + F+ LANYIG G P+N K E I MTAPV+ E +S E XXXXXXXX EAAA + M F++PSKY K E PRPTD RV++RE+
Sbjct: 1 MGMVLGK--ITVE---TPKHEVVHTGAGYEVRKYPPCVVAEVTYDPAEMKGDRDGGFTTLANYIGALGRPQNTKP---EKIDMTAPVITTSGAEXXXXXXXXXXXXSSGEXXXXXXXXXXXXXXXGGEAAAGAGKMTMQFLLPSKYSKAEEAPRPTDERVVVREI 157
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: UPI00129D999E (heme-binding-like protein At3g10130, chloroplastic n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129D999E) HSP 1 Score: 82.8 bits (203), Expect = 1.490e-16 Identity = 70/162 (43.21%), Postives = 92/162 (56.79%), Query Frame = 1
Query: 1 MGSVFGRTGISVENGLSPKYFTLAQRAGYEARWYNPYIVAEVAMS----EGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMP-SKYEKLEHLPRPTDPRVLLREV 471
MG V G+ I+VE +PKY + + A YE R Y P I+AEV +G+ + F +LANYIG G P+N K E I+MTAPV+ + S P P XXXXXXXXXX + M F++P SKY KLE +PRPTDPRV++++V
Sbjct: 1 MGLVLGK--ITVE---TPKYQVVNKTAHYEIRKYEPSIIAEVTYDPKDMKGDPDGGFMILANYIGALGNPQNTKP---EKIAMTAPVITQ-ESAXXXXXXXXXXXXXAKPQPXXXXXXXXXXXXSDEGKKLVTMQFVLPGSKYSKLEDVPRPTDPRVVIKQV 153
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: A0A1E7FPZ4_9STRA (SOUL heme-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPZ4_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.370e-16 Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 1
Query: 1 MGSVFGRTGISVENGLSPKYFTLAQRAG----YEARWYNPYIVAEVAMSEGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
MGSVFG+ E L P++ T+ +R Y+ R Y AE+ G T+ F LA YIGVFG+P+N G EA++MTAPV ME R P E + G++M F +PS+Y++LE +P+PT+P + + E+
Sbjct: 1 MGSVFGK-----ETVLEPQFKTVLERTSVATTYQVREYGKRFAAEIDYGTGGTSSPFQGLARYIGVFGSPQN---EGKEAMAMTAPVSME-RKGTPMXXXXXXXXEK----------------NNQSEGGGKKMKFFLPSEYDELEKIPKPTNPNIKIVEI 136
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: Q8LQ41_ORYSJ (Os01g0850900 protein n=7 Tax=Oryza TaxID=4527 RepID=Q8LQ41_ORYSJ) HSP 1 Score: 79.7 bits (195), Expect = 2.130e-15 Identity = 68/161 (42.24%), Postives = 85/161 (52.80%), Query Frame = 1
Query: 1 MGSVFGRTGISVENGLSPKYFTLAQRAGYEARWYNPYIVAEV----AMSEGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
MG V G+ I+VE +PK+ L AGYE R Y P +VAEV A +G+ + F+VL NYIG G P+N K E I MTAPV+ XXXXXXXX E + M F++PSKY K+E PRPTD RV+LR+V
Sbjct: 1 MGMVLGK--ITVE---TPKHEVLHTGAGYEVRKYPPCVVAEVTYDPAEMKGDRDGGFTVLGNYIGALGNPQNTKP---EKIDMTAPVITSGEXXXXXXXXXXXXXXXXXXX--XXXXXXXXAEERSQGKGQMTMQFLLPSKYSKVEEAPRPTDERVVLRQV 151
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: A0A3B6GX01_WHEAT (Uncharacterized protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A3B6GX01_WHEAT) HSP 1 Score: 79.7 bits (195), Expect = 2.460e-15 Identity = 65/146 (44.52%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 49 SPKYFTLAQRAGYEARWYNPYIVAEVAMS----EGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGR-RMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
+PK+ L GYE R Y P + AEV +G+ + F VLANYIG FG P+N K EAI+MTAPV+ + XXXXXXXXXXE +G+ M F++PSKY K E PRPTD RV+LREV
Sbjct: 17 TPKHEVLHTGDGYEIRKYPPCVAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTKP---EAIAMTAPVITSSGGGEAEXXXXXXXXXXSSEPXXXXXXXXXXXXEGREEQAGKVTMQFLLPSKYAKAEEAPRPTDERVVLREV 159
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: K3XLR4_SETIT (Uncharacterized protein n=11 Tax=Panicoideae TaxID=147369 RepID=K3XLR4_SETIT) HSP 1 Score: 78.6 bits (192), Expect = 6.400e-15 Identity = 71/167 (42.51%), Postives = 88/167 (52.69%), Query Frame = 1
Query: 1 MGSVFGRTGISVENGLSPKYFTLAQRAGYEARWYNPYIVAEVAMS----EGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVM------EVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
MG V G+ I+VE +PK+ L AGYE R Y P + AE +G+ + F+VLANYIG G P+N K E I+MTAPV+ E S PE XXXXXXXXX+ A M F++PSKY K E PRPTD RV++REV
Sbjct: 1 MGMVLGK--ITVE---TPKHEVLHTGAGYEIRRYPPCVAAEFTYDPKEWKGDPDGGFTVLANYIGALGKPQNTKP---EKIAMTAPVITSGAGDGEASSXXXXXXXXXXXXGG---EPEPXXXXXXXXXDDQQAPGKVTMQFLLPSKYAKAEDAPRPTDERVVIREV 156
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: A0A3B6FTC8_WHEAT (Uncharacterized protein n=6 Tax=Triticeae TaxID=147389 RepID=A0A3B6FTC8_WHEAT) HSP 1 Score: 78.2 bits (191), Expect = 9.430e-15 Identity = 65/146 (44.52%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 49 SPKYFTLAQRAGYEARWYNPYIVAEVAMS----EGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSC-LPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
+PK+ L GYE R Y P + AEV +G+ + F VLANYIG FG P+N K EAI+MTAPV+ S P XXXXXXXXX +S M F++PSKY K E PRPTD RV+LREV
Sbjct: 17 TPKHEVLHTGDGYEIRKYPPCVAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTKP---EAIAMTAPVITSSGGGEAEXXXXXXXXXXSSEPXXXXXXXXXXXXEGREEKASKVTMQFLLPSKYTKAEEAPRPTDERVVLREV 159
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: UPI001F5CDDB5 (heme-binding-like protein At3g10130, chloroplastic n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CDDB5) HSP 1 Score: 77.4 bits (189), Expect = 2.140e-14 Identity = 64/152 (42.11%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 49 SPKYFTLAQRAGYEARWYNPYIVAEVAMS----EGNTNDAFSVLANYIGVFGAPKNLKDNGA------EAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGR-RMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
+PK+ L AGYE R Y P ++AEV +G+ + F +LA YIGVFG P+N K E I+MTAPV+ + XXXXXXXXXXE +G+ M F++PSKY K E PRPTD RV+LREV
Sbjct: 17 TPKHEVLRTGAGYEIRKYPPCVLAEVTYDPKDMKGDRDGGFQLLAKYIGVFGKPQNTKPEKIASGGEPEEIAMTAPVITSSGXXXXXXXXXXXXXXXSSEXXXXXXXXXXXXXEGREEQAGKVTMQFLLPSKYGKAEEAPRPTDERVVLREV 168
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: A0A0E0N513_ORYRU (PfkB domain-containing protein n=1 Tax=Oryza rufipogon TaxID=4529 RepID=A0A0E0N513_ORYRU) HSP 1 Score: 79.3 bits (194), Expect = 2.820e-14 Identity = 68/161 (42.24%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 1 MGSVFGRTGISVENGLSPKYFTLAQRAGYEARWYNPYIVAEV----AMSEGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRRMAFIMPSKYEKLEHLPRPTDPRVLLREV 471
MG V G+ I+VE +PK+ L AGYE R Y P +VAEV A +G+ + F+VL NYIG G P+N K E I MTAPV+ XXXXXXXX E M F++PSKY K+E PRPTD RV+LR+V
Sbjct: 1 MGMVLGK--ITVE---TPKHEVLHTGAGYEVRKYPPCVVAEVTYDPAEMKGDRDGGFTVLGNYIGALGNPQNTKP---EKIDMTAPVITSGEXXXXXXXXXXXXXXXXXXX--XXXXXXXXAEERGQGKGQMTMQFLLPSKYSKVEEAPRPTDERVVLRQV 151
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Match: I1HTF3_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HTF3_BRADI) HSP 1 Score: 76.6 bits (187), Expect = 3.660e-14 Identity = 61/147 (41.50%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 49 SPKYFTLAQRAGYEARWYNPYIVAEVAMS----EGNTNDAFSVLANYIGVFGAPKNLKDNGAEAISMTAPVVMEVRSCLPRNCFLSNSCESPAPHPEXXXXXXXXXXEAAAASSGRR--MAFIMPSKYEKLEHLPRPTDPRVLLREV 471
+PK+ L AGYE R Y P + AEV +G+ + F VLA YIGVFG P+N K E I+MT+PV+ S + E XXXXXXXX A + + M F++PSKY K E P+PTD RV+LR+V
Sbjct: 17 TPKHEVLHTGAGYEIRKYPPCVAAEVVYDPKDMKGDPDGGFQVLAAYIGVFGKPQNTKP---EKIAMTSPVITSASSGPGKAXXXXXXXXXXXSSVEPEXXXXXXXXXXADGGNNNKVTMQFLLPSKYSKAEEAPKPTDERVVLRDV 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1549.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1549.1.2 >prot_P-wetherbeei_contig1549.1.2 ID=prot_P-wetherbeei_contig1549.1.2|Name=mRNA_P-wetherbeei_contig1549.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MGSVFGRTGISVENGLSPKYFTLAQRAGYEARWYNPYIVAEVAMSEGNTNback to top mRNA from alignment at P-wetherbeei_contig1549:238..771+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1549.1.2 ID=mRNA_P-wetherbeei_contig1549.1.2|Name=mRNA_P-wetherbeei_contig1549.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig1549:238..771+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1549:238..771+ >mRNA_P-wetherbeei_contig1549.1.2 ID=mRNA_P-wetherbeei_contig1549.1.2|Name=mRNA_P-wetherbeei_contig1549.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig1549:238..771+ (Phaeothamnion wetherbeei SAG_119_79)back to top |