mRNA_P-wetherbeei_contig15467.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A3S3NSL7_9MAGN (50S ribosomal protein L16 n=114 Tax=Mesangiospermae TaxID=1437183 RepID=A0A3S3NSL7_9MAGN) HSP 1 Score: 285 bits (729), Expect = 2.280e-94 Identity = 131/231 (56.71%), Postives = 188/231 (81.39%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLV----REETVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G++YRG+ + FG++ALQ+LEP+W+T+RQIEA R AMTR+ +RGGK+W+R+FPDK VT +P ETRMGSGKGSPE+WV+VVKPGRIL+E+ GV E VAR A+ +A K+P+RT+F++ +E+ M+Q ++ L VADNSGA+EL+CIR++G S +RYA +GDVIVA +K+A P +++ +V++AV+VRT ++R +G IR+DDNAAV+I ++ NP+GTR+FG +ARE
Sbjct: 1 MKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVSVVKPGRILYEMGGVSETVARAAISIAACKMPIRTQFIIAADSKEKNDMIQPQTHLNVADNSGARELMCIRIIGASNQRYAHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARE 231
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A5A7QC00_STRAF (50S ribosomal protein L16 n=2 Tax=Striga TaxID=4169 RepID=A0A5A7QC00_STRAF) HSP 1 Score: 278 bits (711), Expect = 1.280e-91 Identity = 130/232 (56.03%), Postives = 185/232 (79.74%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETV-----MVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G++YRG+ + FG++ALQ+LEP+W+T+RQIEA R AMTR+ +RGGK+W+R+FPDK VT + AETRMGSGKG+PE+WVAVVKPGRIL+E+ GV E +AR A+ +A K+P+RT+F+ + M+Q ++ L VADNSGA+EL+CIR++G S RRYA +GDVIVA +K+A P +++K +V++AV+VRT ++R +G IR+DDNAAV+I ++ NP+GTRIFG + +E
Sbjct: 1 MKGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTIRSAETRMGSGKGNPEYWVAVVKPGRILYEMGGVTENIARRAILIAASKMPIRTQFIFSGSKIAYKINMIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPKMSLEKSEVIRAVIVRTCKELKRNNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIPQE 232
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A0D9XYR4_9ORYZ (Ribosomal_L16 domain-containing protein n=111 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0D9XYR4_9ORYZ) HSP 1 Score: 240 bits (612), Expect = 6.010e-77 Identity = 121/228 (53.07%), Postives = 166/228 (72.81%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETVMVQQESRLRVADNSGAKELLCIRVLGG-STRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G +YRG+ + FG++ALQ+LEP+W+TARQIEA R AMTR+ +RGGK+ +R+FPDK VT +P ETRMGSGKGSPE+WVAVVKPGRIL+E+ GV E VAR A+ +A K+P+R +NSGA++L+CIRV+G S +RYA +GD+IVA +K A P +++ +V++AV+VRT + D IR+DDNAAVII ++ NP+GTR+FG +A+E
Sbjct: 1 MKGKSYRGNRICFGRYALQALEPTWITARQIEAGRRAMTRYARRGGKICVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVFETVARAAISIAASKMPIR---------------------NNSGARKLMCIRVIGAASNQRYARIGDIIVAVIKDAVPQMPLERSEVIRAVIVRTCKEFKYEDRIIIRYDDNAAVIIDQEGNPKGTRVFGAIAKE 207
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A444Z5W7_ARAHY (Ribosomal_L16 domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444Z5W7_ARAHY) HSP 1 Score: 245 bits (626), Expect = 3.380e-76 Identity = 114/227 (50.22%), Postives = 166/227 (73.13%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G++YRG+ + FG++ALQ+LEP+W+T RQIEA R M+R+++RGG++W+R+FPDK VT +P ETRMGSGKGSPE+WVAVVKP RIL+EI G M+Q ++ L VADNSGA++L+CIR++G RRYAS+GD++VA +K+A P ++++ +V++AV+VRT ++R++G I++DDNAAV+I ++ NP+GTRIFG +ARE
Sbjct: 1 MKGISYRGNHICFGRYALQALEPAWITYRQIEAGRRVMSRNVRRGGQIWVRIFPDKLVTIRPTETRMGSGKGSPEYWVAVVKPSRILYEIGG----------------------------NDMIQPQTHLNVADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARE 199
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A1B0C7G2_9MUSC (39S ribosomal protein L16, mitochondrial n=2 Tax=Glossina TaxID=7393 RepID=A0A1B0C7G2_9MUSC) HSP 1 Score: 235 bits (600), Expect = 1.310e-74 Identity = 121/221 (54.75%), Postives = 161/221 (72.85%), Query Frame = 1
Query: 25 SAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREE-TVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLN-PRGTRIFGPVARE 681
S + FG+F L+++ +T+RQIE+AR AM R IKR GK+WI +FPDK +TKKP E RMG GKG+ E+WVA+V+PG+IL+EI V EE+AR A +LA KLP+ T F+ + M+Q ++ L VADNSGA+ ++CI+VLGGS RRYA + D+I A+K A P VKKG+V+KAV+VRT+ + R DGS IRFD NA V++ + P GTRIFGPV RE
Sbjct: 24 SEINFGKFGLKAISRGRLTSRQIESARRAMARSIKRQGKIWICIFPDKPITKKPLEVRMGKGKGNVEYWVALVQPGKILYEIDDVSEEIARSAFKLATAKLPITTTFVTKMVMNNMIQVQTVLSVADNSGARSVMCIKVLGGSRRRYAKIADIIKIAIKDAIPRTKVKKGEVLKAVIVRTRKALVRPDGSVIRFDKNACVLLNDTTEQPIGTRIFGPVTRE 244
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A5N6PBH8_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PBH8_9ASTR) HSP 1 Score: 227 bits (579), Expect = 8.690e-72 Identity = 111/221 (50.23%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIF 663
M G++YRG+ + FG++ALQ+LEP+W+T+RQIEA R AMTR+ +RGGK+W+R+FPDK VT +PAETRMGSGKGSPE+WVAVVKPGRIL+E+ DNSGA+EL+CIR++G S RRYA +GDVIVA +K A P +++ +VV+AV+VRT ++R +G IR+DDNAAV+I ++ NP+GTR++
Sbjct: 1 MKGISYRGNTICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEM-------------------------------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKDAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVY 178
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A5N6PW49_9ASTR (Ribosomal_L16 domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PW49_9ASTR) HSP 1 Score: 237 bits (605), Expect = 2.000e-71 Identity = 116/227 (51.10%), Postives = 157/227 (69.16%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G++YRG+ + FG++ALQ+LEP+W+T+RQIEA R AMTR+ +RGGK+W+R+FPDK VT +PAETRMGSGKGSPE+WVAVVKPGRIL+E+ DNSGA+EL+CIR++G S RRYA +GDVIVA +K A P +++ +VV+AV+VRT ++R +G IR+DDNAAV+I ++ NP+GTR+FG +ARE
Sbjct: 1 MKGISYRGNTICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEL-------------------------------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKDAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARE 184
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A1A9UKH8_GLOAU (30S ribosomal protein S3, chloroplastic n=2 Tax=cellular organisms TaxID=131567 RepID=A0A1A9UKH8_GLOAU) HSP 1 Score: 239 bits (610), Expect = 3.490e-70 Identity = 123/221 (55.66%), Postives = 165/221 (74.66%), Query Frame = 1
Query: 25 SAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETV-MVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLN-PRGTRIFGPVARE 681
S + FG+F L++++ +T+RQIE+AR AM R IKR GK+WI +FPDK +TKKP E RMG GKG+ E+WVA+V+PG+IL+EI V EEVAR A +LA KLP+ T F+ + M+Q ++ L VADNSGA+ ++CI+VLGGS RRYA + D+I A+K+A P + VKKG+V+KAV+VRT+ + RADGS IRFD NA V++ + P GTRIFGPV RE
Sbjct: 639 SKIHFGKFGLKAVDRGRLTSRQIESARRAMARSIKRQGKIWICIFPDKPITKKPLEVRMGKGKGNVEYWVALVQPGKILYEIDDVSEEVARSAFKLATAKLPITTTFVTKMVMYKMIQVQTVLSVADNSGARSVMCIKVLGGSRRRYARISDIIKIAIKEAIPRSKVKKGEVLKAVIVRTRKALVRADGSVIRFDKNACVLLNDTTEQPIGTRIFGPVTRE 859
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A6P4D326_ARADU (uncharacterized protein LOC107465507 n=6 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A6P4D326_ARADU) HSP 1 Score: 221 bits (563), Expect = 6.330e-70 Identity = 105/227 (46.26%), Postives = 154/227 (67.84%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G++YRG+ + FG++ALQ+LEP+W+T+RQIEA R AM+R+++RGG++W+R+FPDK VT +P ETRMGSGKGSPE+WVAVVKP ADNSGA++L+CIR++G RRYAS+GD++VA +K+A P ++++ +V++AV+VRT ++R++G I++DDNAAV+I ++ NP+GTRIFG +ARE
Sbjct: 1 MKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKP-------------------------------------------------ADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARE 178
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Match: A0A067KET2_JATCU (Ribosomal_L16 domain-containing protein n=2 Tax=Malpighiales TaxID=3646 RepID=A0A067KET2_JATCU) HSP 1 Score: 220 bits (561), Expect = 1.230e-69 Identity = 110/227 (48.46%), Postives = 149/227 (65.64%), Query Frame = 1
Query: 1 MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIRVFPDKSVTKKPAETRMGSGKGSPEFWVAVVKPGRILFEIAGVPEEVAREAMRLAMFKLPMRTRFLVREETVMVQQESRLRVADNSGAKELLCIRVLGGSTRRYASVGDVIVAAVKQATPGATVKKGDVVKAVVVRTKNRIRRADGSYIRFDDNAAVIIREDLNPRGTRIFGPVARE 681
M G A+R + + FG++ALQ+LEPSW+T+RQIEA R MTR+ +RGGK+WIR+FPDK +T +P ETRMGSGKGSPE+WVAVVKP DNSGA+EL+CIR++G S RRYA +GDVIVA +K+ATP + +++ +V++AV+VRT ++R +G IR+DDNAAV+I ++ NP+GTRIFG +ARE
Sbjct: 1 MKGKAFRANRISFGRYALQALEPSWITSRQIEAGRRTMTRNARRGGKIWIRIFPDKPITLRPTETRMGSGKGSPEYWVAVVKP--------------------------------------------------DNSGARELMCIRIMGTSNRRYAHIGDVIVAVIKEATPNSPLERSEVIRAVIVRTCKELKRDNGIIIRYDDNAAVVIDQEGNPKGTRIFGAIARE 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15467.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15467.1.2 >prot_P-wetherbeei_contig15467.1.2 ID=prot_P-wetherbeei_contig15467.1.2|Name=mRNA_P-wetherbeei_contig15467.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp MTGLAYRGSAVQFGQFALQSLEPSWVTARQIEAARIAMTRHIKRGGKVWIback to top mRNA from alignment at P-wetherbeei_contig15467:2..1204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15467.1.2 ID=mRNA_P-wetherbeei_contig15467.1.2|Name=mRNA_P-wetherbeei_contig15467.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1203bp|location=Sequence derived from alignment at P-wetherbeei_contig15467:2..1204- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15467:2..1204- >mRNA_P-wetherbeei_contig15467.1.2 ID=mRNA_P-wetherbeei_contig15467.1.2|Name=mRNA_P-wetherbeei_contig15467.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=681bp|location=Sequence derived from alignment at P-wetherbeei_contig15467:2..1204- (Phaeothamnion wetherbeei SAG_119_79)back to top |