mRNA_P-wetherbeei_contig15415.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: D7FT96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT96_ECTSI) HSP 1 Score: 113 bits (283), Expect = 5.910e-27 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIESYRDPDSG 333
MG AS + +D LA LK D+A DAAFW +WK +T P +++E++S +R+L+ RPGNV L AV+ L VV++P P + A+TAV +LTRV+PF++E+Y DP++G
Sbjct: 1 MGTGASKVAFRDVLAQLKNEDIATNDAAFWSKLWKTETNPHDVFEVISPTAVRKLKVARPGNVEALLRMAVSHLEKVVDDPDPFVLKSAMTAVSVLTRVLPFILEAYTDPETG 113
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A7S2LZK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZK8_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.060e-26 Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIE 309
MGA+AS + +++L +L DV+ DA FWD +WK+ ++ E++E+L+ D+ RRLR +R N+A LF QA A+LC +VE P F++AL VR+LTRV+PFL+E
Sbjct: 1 MGASASKIKFRESLTSLISRDVSPEDAEFWDELWKIPSSADEVFELLTPDNARRLRDERFDNLATLFTQATAQLCQIVETPYTIYFDQALNCVRVLTRVLPFLLE 105
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A6H5JFK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK3_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.490e-26 Identity = 51/113 (45.13%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIESYRDPDSG 333
MG AS + +D LA LK D+A DAAFW +WK +T P +++E++S +R+L+ RPGNV L AV L V+++P P + A+TAV +LTRV+PF++E Y DP++G
Sbjct: 1 MGTGASKVAFRDVLAQLKNEDIATNDAAFWSNLWKTETNPHDVFEVISPTAVRKLKVARPGNVEALLRMAVLHLEKVLDDPDPFVLKSAMTAVSVLTRVLPFILEEYTDPETG 113
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A7S3JVS4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVS4_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.040e-26 Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVADAA--FWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIESYRD 321
MG ++S L + L TL + DV+ A FWD +WKL TTP +I+E++ DD+R+L++DRP N+ LF QAVA+LC +V P P F +AL VR+LTR++PFL+E D
Sbjct: 1 MGNSSSKGDLAEILGTLSQTDVSPEAHDFWDELWKLSTTPEDIFELIPPDDVRQLKRDRPENLVTLFTQAVAQLCQIVHTPVPMYFGQALNCVRILTRMLPFLLEDPSD 109
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A7S3YEL6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEL6_HETAK) HSP 1 Score: 102 bits (253), Expect = 1.470e-25 Identity = 48/106 (45.28%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIES 312
MG A++ DAL + D+ D FWD +W++ +T +I+E++S DD+R+ ++RPGN+A LF Q VA+LC +VE P+ S F +ALT VR+LTR++PF++ES
Sbjct: 1 MGNASTREDFGDALEKITRDDIPPDDTDFWDSLWRIPSTAFDIFEMVSPDDVRKWLRERPGNLATLFTQGVAQLCQLVETPNASYFAQALTCVRMLTRLLPFMLES 106
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A7S2UYH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYH4_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.340e-25 Identity = 50/111 (45.05%), Postives = 78/111 (70.27%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIESYRDPD 327
MG +S L ++L ++ DV+ D FWD +W+++TTP E++E+L + +RRL+ +R GN+A LF QAVA+LC VVE P P+ F++ALT +R+LTR++P L++S D
Sbjct: 7 MGNESSRELFAESLEKIQTTDVSPDDTEFWDSLWRIKTTPYEVFEVLGPEGVRRLKSERAGNLATLFTQAVAQLCQVVETPMPAYFDQALTCIRVLTRLVPVLLDSSWGDD 117
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: F0Y4A0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4A0_AURAN) HSP 1 Score: 107 bits (267), Expect = 8.850e-25 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVADAA--FWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIESYRD 321
MG S L D L L + DV+ A FWD +WKL TTP +++E++S DD+R+L+++RP NV LF QAVA+LC +V P P F +A +R+LTR++PFL+E D
Sbjct: 723 MGGGNSKADLADILVMLSQSDVSPDAHDFWDELWKLSTTPEDVFELISPDDVRQLKRERPENVVTLFTQAVAQLCQIVHTPVPMYFGQASNCLRILTRLLPFLLEDGGD 831
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A8J2SMX9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMX9_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.110e-24 Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVADAA--FWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIESYRD 321
MG + S L D L L ++DV+ A FWD +WKL TT +++E+++ +D+R LR++RP NV LF QA A+LC +V P P F +AL VR+LTR++PFL+E + +
Sbjct: 1 MGGSNSKADLADILVALAQNDVSPDAHDFWDELWKLDTTAEDVFELITPEDVRHLRRERPENVVTLFTQATAQLCQIVHTPVPMYFGQALNCVRVLTRILPFLLEEHDE 109
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A7S2XNZ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNZ9_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.600e-23 Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIE 309
MGA+AS ++++ L E DV+ DA FWD +WK+ ++P+E++E++S + RRLR +R N+A LF QA A+LC +VE P F++AL VR+LTRV+PFL+E
Sbjct: 1 MGASASREKFRESVTALIEVDVSPDDAEFWDELWKIPSSPNEVFELISPEAARRLRDERFDNLATLFTQATAQLCQIVETPYNIYFDQALNCVRVLTRVLPFLME 105
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Match: A0A6U3SKY5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SKY5_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.040e-23 Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 1 MGAAASTLLLKDALATLKEHDVA--DAAFWDPIWKLQTTPSEIYEILSADDIRRLRKDRPGNVAGLFAQAVAKLCAVVENPSPSEFEEALTAVRLLTRVMPFLIES--YRDPD 327
MGA+AS ++++ L E DV+ DA FWD +WK+ ++ E++E++S D RRLR +R N+A LF QA A+LC +VE P F++AL VR+LTR++PFL+E DPD
Sbjct: 1 MGASASREKFRESVTALIEVDVSPDDADFWDELWKIPSSADEVFELISPDAARRLRDERFDNLATLFTQATAQLCQIVETPYNIYFDQALNCVRVLTRILPFLLEKGDLGDPD 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15415.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15415.2.1 >prot_P-wetherbeei_contig15415.2.1 ID=prot_P-wetherbeei_contig15415.2.1|Name=mRNA_P-wetherbeei_contig15415.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp MGAAASTLLLKDALATLKEHDVADAAFWDPIWKLQTTPSEIYEILSADDIback to top mRNA from alignment at P-wetherbeei_contig15415:894..1499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15415.2.1 ID=mRNA_P-wetherbeei_contig15415.2.1|Name=mRNA_P-wetherbeei_contig15415.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig15415:894..1499+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15415:894..1499+ >mRNA_P-wetherbeei_contig15415.2.1 ID=mRNA_P-wetherbeei_contig15415.2.1|Name=mRNA_P-wetherbeei_contig15415.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig15415:894..1499+ (Phaeothamnion wetherbeei SAG_119_79)back to top |