mRNA_P-wetherbeei_contig15415.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE) HSP 1 Score: 154 bits (389), Expect = 4.580e-44 Identity = 87/186 (46.77%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 1 CGLQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPTLTLSTVWHKSADDALKAVKGD-AVVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAA---GSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHKE 546
CGLQ+ +RI G+K R+E++ AY+EY +R+RP L L T WHK+ DD AV+ D VV+CLDE G Q SP FS +F LEEGGSR TFV+G AE G+PP L+ G LSLS MTFTH AR +LAEQIYRA+EIR+GS YHKE
Sbjct: 62 CGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFVFSKLEEGGSRLTFVVGGAE-------------------------------------GLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.290e-32 Identity = 77/185 (41.62%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 4 GLQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPT-LTLSTVWHKSADDALKAVKGDA----VVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
G++V IRIVGRK E+W AY Y R+RP+ + + T+WHK+ + +K VKGD+ V+ LD G TS FS+ ++ L++GGSR +FVIG AE PY E+ G+ N ++ ++L SLS +TFTH AR +L EQIYRA+EIRKGSGYHK
Sbjct: 58 GMEVRIRIVGRKNGSEKWLEDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGGSRLSFVIGGAEG------------LPY----ELRDGS-YNPKKSLIL--------------FSLSALTFTHQFARTLLMEQIYRASEIRKGSGYHK 211
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A448ZHA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHA3_9STRA) HSP 1 Score: 111 bits (277), Expect = 4.740e-27 Identity = 76/185 (41.08%), Postives = 95/185 (51.35%), Query Frame = 1
Query: 4 GLQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPT-LTLSTVWHKSADDALKAVKGDAV----VICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
G++V IRIVGRK E W E Y +R+RP+ + + T WHK +K V D VI LD G Q TS FS+ ++ L+EGGSR +F+IG AE G L+ G QA L+SLS MTFTH AR++L EQIYRA EI+KGSGYHK
Sbjct: 71 GMKVNIRIVGRKT-SEPWLEEGVEMYEKRLRPSNVEVETTWHKDNAALIKGVDADRSKNHKVILLDPTGTQPTSEKFSEKVYQWLDEGGSRLSFIIGGAE------------------------GLPAELKYPSYSSGKKSKDQAP--MLISLSAMTFTHQFARLLLIEQIYRATEIQKGSGYHK 228
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A0G4I1Y4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I1Y4_9ALVE) HSP 1 Score: 109 bits (273), Expect = 6.740e-27 Identity = 75/191 (39.27%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 7 LQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPTLTLSTVWHKSADDALKAVK-----GDAVVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGS-------QLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
++ I VGRK EWQ +A EEY R+ P L L VWH+ D ++++K G A+V+ LDE GA S +FS F+ + GGSR FV+G AE L L + + ++ AG +L G Q G+ + SLS++TFTH A V+LAEQIYRA EIR+ SGYHK
Sbjct: 1 MRAEILAVGRKTPGREWQATALEEYQNRLSPFLDLEVVWHRDNDALIQSLKKRQSRGGALVV-LDECGASMGSAEFSDFFFEQMVNGGSRVAFVVGAAEG--LPEELKQMVYQQAKAGSKS-AGGSLKTSNGKKAGGEAAKQQKTGAFKWDPPPKTFSLSRLTFTHEMALVLLAEQIYRANEIRRNSGYHK 187
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A8J6CA45_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA45_DIALT) HSP 1 Score: 107 bits (266), Expect = 9.670e-26 Identity = 79/190 (41.58%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 1 CGLQVLIRIVGRK---GRDEEWQRSAYEEYVRRVRPTLTLSTVWHKSADDALKAV-----KGDAVVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHKE 546
C Q+ I VG++ E + + YEEY R R + L TVWHKS + + AV KG AVV CLDE G TS S+L+F L EGGSR FV+G AE L + L P R A+ G+ + + L+ LSL ++TFTH AR+ILAEQIYRA +IR G+ YHKE
Sbjct: 28 CASQITIHCVGKRRTASSSEGFSDAGYEEYALRSRAHVDLRTVWHKSDGELVVAVGRECAKGCAVV-CLDERGPTCTSIALSELVFRWLTEGGSRLAFVVGGAEG--LPAAL-----RPGRGASHDGRGSGDSAAEALRLR------------YLSLGRLTFTHQMARLILAEQIYRAVQIRAGTQYHKE 197
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A1E7FVP2_9STRA (DUF163-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVP2_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.700e-25 Identity = 70/185 (37.84%), Postives = 96/185 (51.89%), Query Frame = 1
Query: 4 GLQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPT-LTLSTVWHKSADDALKAVKGDAV----VICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
G++V IRIVGRK E W + Y +R+RP+ + + T WHK +K + D VICLD G Q TS F+ ++ L+EGGSR +F+IG AE L + P + ++ A ++SLS +TFTH AR++L EQIYRA EI+KGSGYHK
Sbjct: 38 GMKVNIRIVGRKS-SEPWLEEGVDMYEKRLRPSNVEIETTWHKDNVALMKGYEMDCSKNYKVICLDPKGKQPTSEVFTTNMYQWLDEGGSRLSFIIGGAEG------LPNELKYPTASSKKISAPI-----------------------MISLSSLTFTHQFARLLLIEQIYRATEIQKGSGYHK 192
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A2E3LZ89_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3LZ89_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 1.500e-23 Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 1
Query: 7 LQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPTLTLSTVWHKSADDALKAVKGDAVVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
L++ I +VGR E W +A ++YV+R+ + ++ + K+ + +K + + ++CLD G + S F LLF LE GGSR TFVIG AE G+P ++ + L+SLS +TFTH AR+IL EQIYRA EIRKG+GYHK
Sbjct: 2 LKIKIILVGRT--KEAWLENAVQDYVKRLSSSTSIEWLVLKTNEQLIKQIDKERSILCLDPLGEKVNSERFCTLLFQQLETGGSRVTFVIGGAE-------------------------------------GLPDQIRKKHT-LISLSPLTFTHQIARLILIEQIYRAFEIRKGTGYHK 140
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A7S1ZDB4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZDB4_TRICV) HSP 1 Score: 86.3 bits (212), Expect = 1.440e-18 Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 4 GLQVLIRIVGRKGRDEEWQRSAYEEYVRRVRPT-LTLSTVWHKSADDALKAVKGDA----VVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAE 288
G+++ IRIVGRK E W AY Y R+RP+ + + TVWHK D +K V+GD V+ LD +G TS FS ++D L+EGGSR FVIG AE
Sbjct: 5 GMEIKIRIVGRKNGCEGWLEDAYGMYETRLRPSGVGVETVWHKGDADLVKGVQGDVQKGHAVVLLDPSGQTMTSEKFSDQMYDWLDEGGSRLAFVIGGAE 104
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A7S1IHQ0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHQ0_9EUGL) HSP 1 Score: 85.9 bits (211), Expect = 1.510e-18 Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 169 VVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGSQLL--SLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
+ +CLDEN Q TS DFS+ ++ LE+GGSR TFVIG A+ P + GT G+ P G Q+L SLSKMTF H ARV+L EQ+YRA +IR G+ YH+
Sbjct: 7 ICVCLDENAKQMTSEDFSEFVYQQLEQGGSRCTFVIGGADG------------LPMSLRPRSYGGT-----------GLGPT----GPQMLYLSLSKMTFVHQFARVVLVEQLYRATQIRNGTKYHR 106
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Match: A0A7S2F628_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F628_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.300e-16 Identity = 63/188 (33.51%), Postives = 83/188 (44.15%), Query Frame = 1
Query: 1 CGLQVLIRIVGRKGRDEEWQRSAYEEYVRRVRP-TLTLSTVWHKSADDALKAVKGDAVVICLDENGAQHTSPDFSKLLFDLLEEGGSRTTFVIGPAEASHLFSFLC*RISTPYRCAAEVFAGTTLNLRRFILLQGMPPDLQAAGS------QLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHK 543
LQV + I GRK D A+E+Y R+ P + L TVWHKS D KA+K + C+ + L+ GG E +F V G +G+P +++ + +SLS MTFTH ARVILAEQ+YRAAEIRKG+GYHK
Sbjct: 52 AALQVTLHIQGRKINDHN--EVAFEQYAMRLTPHRIQLKTVWHKSNDQLTKAIKATSREPCI-----------CLDVCGQQLDSGGFEQLLYQRLVEGGSRLAF--------------VIGGA----------EGLPDEVREKKDPKLQHVEFISLSSMTFTHQMARVILAEQVYRAAEIRKGTGYHK 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15415.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15415.1.1 >prot_P-wetherbeei_contig15415.1.1 ID=prot_P-wetherbeei_contig15415.1.1|Name=mRNA_P-wetherbeei_contig15415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=49bp MPPDLQAAGSQLLSLSKMTFTHATARVILAEQIYRAAEIRKGSGYHKE*back to top mRNA from alignment at P-wetherbeei_contig15415:25..573- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15415.1.1 ID=mRNA_P-wetherbeei_contig15415.1.1|Name=mRNA_P-wetherbeei_contig15415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig15415:25..573- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15415:25..573- >mRNA_P-wetherbeei_contig15415.1.1 ID=mRNA_P-wetherbeei_contig15415.1.1|Name=mRNA_P-wetherbeei_contig15415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=147bp|location=Sequence derived from alignment at P-wetherbeei_contig15415:25..573- (Phaeothamnion wetherbeei SAG_119_79)back to top |