mRNA_P-wetherbeei_contig1528.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A7S2UR08_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR08_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.730e-12 Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 151 AVDGARRRLFGQLPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKK 411
A+ R+ +FGQ+P+ RTG K L G WYPE I+ R P Y EL +RR KL ++R GKGPPKKG GKR++K
Sbjct: 14 AMAAVRKEVFGQMPQRNVRTGYKFLKKSHTGVFDERWYPESIEKSAREVLPG-YTSELEQRRLEKLEYLRRRGKGPPKKGLGKRAQK 99
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A7S2GJ86_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJ86_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 7.960e-11 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 148 DAVDGARRRLFGQLPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELT---ERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
D + A R +FG P + RTGNK + GP + Y +++ H R +PD L ERR KLA +KR GKGPPKKGAGKR+ KR
Sbjct: 74 DNLVEAGRLIFGNRPHSPVRTGNKIIRKKFSGPLLLQQYDKNL--HAERLMKKAFPDFLNPKEERREMKLAYLKRRGKGPPKKGAGKRAAKR 163
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A835Z2B4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 8.400e-11 Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 169 RRLFGQLPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYP-DELTERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
RR+F L +TG + L L G A+A WYPE ++R+ ++ D ERRA +LA ++ GKGPPKKGAGKR++KR
Sbjct: 8 RRIFMNLNVVKHKTGTRHLTKHLNGLAVADWYPESPSKWMKRYLGEVWDLDGRKERRADQLATLRAKGKGPPKKGAGKRAQKR 90
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A6P6UE71_COFAR (28S ribosomal protein S33, mitochondrial-like n=4 Tax=asterids TaxID=71274 RepID=A0A6P6UE71_COFAR) HSP 1 Score: 65.5 bits (158), Expect = 8.870e-11 Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 127 VLTTAALDAVDGARRRLFGQ-LPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKKR*IVSLP 432
VL AA+ V AR R+FG L R+ +K L L G ++ WYP DI RH + + + R KL ++KR GKGPPKKG GK++ KR VS P
Sbjct: 9 VLAEAAIKGVTEARARIFGHILNPTGQRSAHKILRKKLIGEKVSQWYPHDI-----RHDDPLVMAQQEQERLDKLEMLKRRGKGPPKKGQGKKAAKRNKVSTP 106
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A7S2WK26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK26_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.660e-10 Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 100 PGTEHMAHRVLTTAALDAVDGAR---RRLFGQLPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
PG A L T + V R RR+FG LP + RTGNK L GP + S + +RR FP++ +E RR KL+ ++R GKGPP KGAGKRS K+
Sbjct: 13 PGPAGFARCTLATLSDGEVRELREAGRRIFGNLPLSPDRTGNKVLRKKWLGPIVTSGDHKPFHDVIRRAFPTLGTEEQDHRRQ-KLSYLRRRGKGPPMKGAGKRSAKK 119
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A7S2HGM2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGM2_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.980e-10 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 139 AALDAVDGARRRLFGQLPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSM-----YPDELTERRAAKLALMKRFGKGPPKKGAGKRSKK 411
A+ A++ R+ +FG LP RTG++ L P+ GP +A +Y E ++ R+ + + Y E ERR K +++ GKGPPKKGAGKR+ K
Sbjct: 2 ASKAAIEAVRKEVFGHLPVLNIRTGHQVLKKPVVGPYLAKYYMEPMEKSARKAWRTFGYMPPYTTEQQERRLLKNEKLRQKGKGPPKKGAGKRATK 97
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A804JIU1_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JIU1_MUSAM) HSP 1 Score: 63.5 bits (153), Expect = 3.900e-10 Identity = 45/97 (46.39%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 127 VLTTAALDAVDGARRRLFGQ-LPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
+LT AAL V AR R+FG L R+ +K L L G +A WYP DIK P + E ++R AKL ++KR GKGPPKKG GKR+ KR
Sbjct: 6 LLTAAALQGVAEARARIFGHILNPTGKRSPHKILRKKLIGDKVAQWYPYDIK----NDDPLVIARE-EKQRLAKLEMLKRRGKGPPKKGQGKRATKR 97
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: A0A4S8IQ43_MUSBA (Uncharacterized protein n=3 Tax=Petrosaviidae TaxID=1437197 RepID=A0A4S8IQ43_MUSBA) HSP 1 Score: 63.2 bits (152), Expect = 5.480e-10 Identity = 45/97 (46.39%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 127 VLTTAALDAVDGARRRLFGQ-LPRAFCRTGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
+LT AAL V AR R+FG L R+ +K L L G +A WYP DIK P + E ++R AKL ++KR GKGPPKKG GKR+ KR
Sbjct: 6 LLTAAALQGVAEARARIFGHVLNPTGKRSPHKILRKKLIGDKVAQWYPYDIK----NDDPLVLARE-EKQRLAKLEMLKRRGKGPPKKGQGKRAVKR 97
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: K8EXT6_9CHLO (Unnamed protein product n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EXT6_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 6.810e-10 Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 208 TGNKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
TG K L L GP + SWYPE I R ++ D +RR KL MKR GKGPPKKG GKR+KK+
Sbjct: 31 TGRKLLKKALVGPRLTSWYPEGI-----RKMDMLFEDPDDKRRKVKLERMKRRGKGPPKKGEGKRAKKK 94
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Match: UPI001FB10E94 (uncharacterized protein LOC124938490 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB10E94) HSP 1 Score: 62.4 bits (150), Expect = 1.110e-9 Identity = 40/97 (41.24%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 127 VLTTAALDAVDGARRRLFGQLPRAFCRTG-NKQLMAPLRGPAIASWYPEDIKPHVRRHFPSMYPDELTERRAAKLALMKRFGKGPPKKGAGKRSKKR 414
VL AA+ V AR ++FG + + +K L L G IA WYP DI R +Y + + R +KL ++KR GKGPPKKG GKRSK++
Sbjct: 9 VLAEAAIKGVTEARAKIFGHVLNPTGQVSPHKILRKKLFGEKIAQWYPHDI-----RTDDPLYMAQQQQERLSKLEMLKRRGKGPPKKGQGKRSKRK 100 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1528.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1528.5.1 >prot_P-wetherbeei_contig1528.5.1 ID=prot_P-wetherbeei_contig1528.5.1|Name=mRNA_P-wetherbeei_contig1528.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp MAHRVLTTAALDAVDGARRRLFGQLPRAFCRTGNKQLMAPLRGPAIASWYback to top mRNA from alignment at P-wetherbeei_contig1528:6126..6642+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1528.5.1 ID=mRNA_P-wetherbeei_contig1528.5.1|Name=mRNA_P-wetherbeei_contig1528.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=517bp|location=Sequence derived from alignment at P-wetherbeei_contig1528:6126..6642+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1528:6126..6642+ >mRNA_P-wetherbeei_contig1528.5.1 ID=mRNA_P-wetherbeei_contig1528.5.1|Name=mRNA_P-wetherbeei_contig1528.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig1528:6126..6642+ (Phaeothamnion wetherbeei SAG_119_79)back to top |