mRNA_P-wetherbeei_contig15278.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Match: UPI00199B104B (Uncharacterized protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI00199B104B) HSP 1 Score: 248 bits (634), Expect = 9.650e-73 Identity = 183/512 (35.74%), Postives = 256/512 (50.00%), Query Frame = 1
Query: 1 DKSGKRVLIQTEGAIQVSALALILRVQCPGAKSYARHFRVLIPPPVAQVPDRIPASA-----GLRLRLRPGDTVESVAEALFPAQRSLRQAMVAEVINANPTVFTDGRIHGVPPGTVLWFPDPRDLRKLTQPRLGPNAPSPRPAQTKIAGESI-SSVTAPAPAQPRRRIG---ERPMLQRRTTEPVRNAVPPDCASIPD--GNANAATVAPESRTLETRTRDVESVLGKMRQSQAAFDSQLSSLEHALQGLQKTVAAASTCVARPVIEPVARQEIHTAMKGETKPWYFWLGSALLALITGASGFLFARR-RLLHDLEPKDEQANQR---ARPIKTGIELTIHSTLRPQV-------------------------PGTAGRVEQPPLISSAQAIKSSPTPRRQVESQSAPSAPRPDSIPASASSPLPTTFTGTLAHEMDEVLNNTRSIFNDVDRFIAMGRTKNALGLLELELQQKPDDRDVWIKLMAVYRQEKMSAELESTAREFSQHFPSQR 1416
D + V I T+ + + ALAL+LRVQC GA YARHF LIPP V+ R+P + G RL L GDTVESVA +FP QR L++ +V +VI NP F +GR +P GTVLWFPD RD+RK Q +GP A + A+ AG S+ S+ PAP + + +P+ RR E P +C + + G + VAPE LE + R +ES + + Q + D QL LE +LQ LQ + +A A+P P A+ + T +K E W W A L + GF F RR L L DEQ ++ A + +E T T P+ P AG + A+ + +++S S P+ PD + + EMD+ L+NTRS+F DVDRFIA+GRT+NAL LL+ ++ + P DRD WIKLMA+YRQ+KM +L R+F +FP+++
Sbjct: 52 DAARNLVTITTDEPVAIPALALVLRVQCAGAPLYARHFSALIPPAVSTTQSRLPDAPSATRRGFRLSLLRGDTVESVAAVIFPGQRGLQRNLVRQVIAGNPNAFPNGRARELPAGTVLWFPDLRDIRKSVQ--VGPLASATTGARR--AGRSVVPSLVQPAPPEVAEAMPPKPRKPVTLRRALELGDKPGPQECRQLMELCGAETPSAVAPE---LEDKARKLESGVNALHLKQDSIDQQLQRLEQSLQALQSAIRSAPAVAAQPA-PPPAKVVVRTVVKSEPISWIIWAALAGLVVAAAIGGFAFGRRGSLSRGLAETDEQLDRMLATAATVMRELESTPAPTPAPRXXXXXXXXXXXXXXXXXXPVELADASPPAAGTGQGADFTLDTSAMLPAAAVDVELKSDS-PAQHDPDGLSTD------------VLFEMDQALDNTRSMFTDVDRFIALGRTENALSLLQFQVHKDPKDRDSWIKLMAIYRQQKMDLDLSKAVRQFKNNFPNEK 542
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Match: A0A0S8D893_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8D893_9PROT) HSP 1 Score: 70.1 bits (170), Expect = 4.780e-9 Identity = 31/76 (40.79%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 1177 LAHEMDEVLNNTRSIFNDVDRFIAMGRTKNALGLLELELQQKPDDRDVWIKLMAVYRQEKMSAELESTAREFSQHF 1404
L EMD V++ TR++F+D+DRFI +G+ +NA+ +L+ ++++P DR W+ LMA+YR M + T +F Q F
Sbjct: 689 LRAEMDNVMDATRTMFSDIDRFIMLGQYQNAISVLDARIKREPSDRGSWVTLMAIYRDTDMKDDFYRTYADFQQQF 764
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Match: UPI0019C04BDC (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019C04BDC) HSP 1 Score: 61.6 bits (148), Expect = 3.800e-7 Identity = 47/155 (30.32%), Postives = 71/155 (45.81%), Query Frame = 1
Query: 7 SGKRVLIQTEGAIQVSALALILRVQCPG-AKSYARHFRVLIPPP-VAQVPDRIPAS----------AGLR-----LRLRPGDTVESVAEALFPAQRSLRQAMVAEVINANPTVFTDGRIHGVPPGTVLWFPDPRDLRKLTQPRLGPNAPSPRPAQ 420
+G R+ I+T + A + L CPG ++ Y R + +L+ PP V + P A+ A LR L R GDT+ES+A A+FP R +++ + + NPT+ T G +P + P+ R K PR A P AQ
Sbjct: 67 AGARLRIETRAPVNAPAFVIGLVASCPGQSREYQRDYSLLLDPPAVGRAPPSQAAAXXXXXXXXXXASLRAIAATLIARIGDTLESIANAIFPRNRGAKKSYIEALRATNPTLATLGENDPIPVDAPIALPNLRTFAKTQAPRATQQAQEPPRAQ 221
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Match: UPI0016580391 (hypothetical protein n=1 Tax=Thauera sp. CAU 1555 TaxID=2767595 RepID=UPI0016580391) HSP 1 Score: 61.6 bits (148), Expect = 2.020e-6 Identity = 111/416 (26.68%), Postives = 177/416 (42.55%), Query Frame = 1
Query: 193 PGDTVESVAEALFPAQRSLRQAMVAEVINANPTVFTD--GRIHGVPPGTVLWFPDPRDLRKLTQPRLGPNAPSPRPAQTKIAGESISSVTAPAPAQPRRRIGERPMLQRRTTEPVRNAVPPDCASIPDG---NANAATVAPESRTLETRTRDVES---VLGKMRQS---QAAFDSQLSSLEHALQGLQKTVAAASTCVARPVIEPVARQEIHTAMKGETKPWYFWLGSALLALITGASGFLFARRRLLHDLEPKDEQANQRARPIKTGIELTIHSTLRPQVPGTAGRVEQPPLISSAQAIKSSPTPRRQVESQSAPSAPRPDSIPASASSPLPTTFTGTLAHEMDEVLNNTRSIFNDVDRFIAMGRTKNALGLLELELQQKPDDR-DVWIKLMAVYRQEKMSAELESTAREFSQHF 1404
PG+++ES+A AL+P + ++R+ VA+ ANPT+F D R +PPGT L PDP +++ P + R A+ K A + PA PRR P R V + A P G +A+A + A E + + R +++ +L ++R+ QA + + L+ A+ Q T A + A P IE A TA + + P Y L + ++A I G L RRR + A RA + T + + + P+ A +E S AI+ P + AP S +A S P +A E DE + S + ++ GR + A L ++ P W+KL+ VYR M AE + +R+ ++ F
Sbjct: 174 PGESLESLAAALYPHEPAIRERFVADAARANPTLFPDRDSRARALPPGTELLVPDPA---RVSAPATAGSGSPARTAERKPAQMT--------PAAPRRPAATPPPSAPREDRLVVDVAEDATADAPAGPRYDASADSGARERQLVAAIDRSIQAQVDLLERIRELERIQAELIDRANRLDAAMPA-QATPAPPAQQPAAPAIE--ANVPASTAPRSDW-PLYLALFAGIVAAILGLQA-LDRRRR---------DAAAARAASLSTTTQPA--AGVWPEEARAASGLEP-----SRGAIQLDRPPTEE--------APPTPSYEWAAPSVAP------IAVE-DENIEEHESAVELAEIMMSFGRVQGAAETLAEFIRGNPQQAVQPWLKLLDVYRAAGMRAEFDGLSRQLNKTF 542
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Match: A0A2K9LCQ5_9RHOO (Uncharacterized protein n=3 Tax=Rhodocyclales TaxID=206389 RepID=A0A2K9LCQ5_9RHOO) HSP 1 Score: 60.1 bits (144), Expect = 6.010e-6 Identity = 85/326 (26.07%), Postives = 126/326 (38.65%), Query Frame = 1
Query: 10 GKRVLIQTEGAIQVSALALILRVQCPGAKSYARHFRVLIPPPVAQ--VPDRIPASAGLR-----------------------LRLRPGDTVESVAEALFPAQRSLRQAMVAEVINANPTVFTD--GRIHGVPPGTVLWFPDPRDLRKLTQPRLGPNAPSPRPAQTKIAGESISSVTAPA-PAQPRRRIGERPMLQRRTTEPVRNAVPPDCASIPDGNANAATVAPESRTLETRTRDVESVLGKMRQSQAAFDSQLSSLEHALQGLQKTVAAASTCVARPVIE-PVARQEIHTAMKGETKPWYFWLGSALLALITGASGFLFARRRL 900
GK V I I L L + C A R + +L+P PV + V D + A AG PG+++ES+A ALFP Q + R+ + EV+ ANPT+F D R + PGT L PDP LR + A + RP Q E+ P+ PA P + P R + + D + P +A A E + L R +++ L + + + Q +E A + T P +E P A+ E+ + +P W L L + LFA +RL
Sbjct: 68 GKVVTISAPTPINEPVLRLGIDNVC--AARLRREYTLLLPFPVTRPTVADHMAADAGAAPAGPSPRPTSSARRAAPPATYQTWTTAPGESLESLAAALFPGQPAARERFIDEVVRANPTLFPDRGARSLALEPGTELLVPDPARLR------IPAPAATARPKQAAGVAEAXXXXXXPSRPALP----PDAPQTDRLVVQMADDRPATDAGAAP--HAGDDIDARERQLLTAIDRSIQAQLELLERIRELERLQAELIERA----NRLGTIPVTAPNPPAVEQPAAQPELTAKQPPDARPSRDW--PLFLVLFAASVAVLFAWQRL 373
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Match: A0A2U1RUM8_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A2U1RUM8_9PROT) HSP 1 Score: 58.9 bits (141), Expect = 1.530e-5 Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 1
Query: 1 DKSGKRVLIQTEGAIQVSALALILRVQCP--GAKSYARHFRVLIPPPVAQVPDRIPASAGLRLRLRPGDTVESVAEALFPAQRSLRQAMVAEVINANPTVFTDGRIHGVPPGTVLWFPDPRDLRKLTQPRLGPNAPSPRPAQTKIAGE 438
D +G R+ ++T +Q A L + C G + +R F +L+ P R P A ++ GDT+ S+A A++P R++R+A V + ANP V + G +PPGT + PD R R + PRPA T+ +
Sbjct: 84 DGAGWRLRVRTRAPVQEPATRLRVDASCEDGGKDATSRTFDLLLDP-------RAPEPAPPAMQSVAGDTLASIAAAIYPKSRAVREAYVQALRAANPAVQSLGTDEPLPPGTPVVLPDLR--------RFSLSLSLPRPAATESTAQ 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15278.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15278.1.1 >prot_P-wetherbeei_contig15278.1.1 ID=prot_P-wetherbeei_contig15278.1.1|Name=mRNA_P-wetherbeei_contig15278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=473bp DKSGKRVLIQTEGAIQVSALALILRVQCPGAKSYARHFRVLIPPPVAQVPback to top mRNA from alignment at P-wetherbeei_contig15278:198..1616- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15278.1.1 ID=mRNA_P-wetherbeei_contig15278.1.1|Name=mRNA_P-wetherbeei_contig15278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1419bp|location=Sequence derived from alignment at P-wetherbeei_contig15278:198..1616- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15278:198..1616- >mRNA_P-wetherbeei_contig15278.1.1 ID=mRNA_P-wetherbeei_contig15278.1.1|Name=mRNA_P-wetherbeei_contig15278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1419bp|location=Sequence derived from alignment at P-wetherbeei_contig15278:198..1616- (Phaeothamnion wetherbeei SAG_119_79)back to top |