mRNA_P-wetherbeei_contig15153.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A835Z666_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z666_9STRA) HSP 1 Score: 224 bits (571), Expect = 4.700e-64 Identity = 123/245 (50.20%), Postives = 151/245 (61.63%), Query Frame = 1
Query: 1 TFIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGFGTPECAAAAATAIKNVCQACGAQMGEPVLDLYDQLLARREMLP----FRDELEIVEGLSHVVSALP 723
F P L +LV VL+RLMR+PED DQ T DQ+ D+K+HRYDV D+L DC VLGAV CL V LE E+A+L A + W EA LF RS+A+GVPS + AVP ++ L +LP + H+RYTANLVVGRY+ WL+ HP+ L MF +L+ GF T +CAAAAATAIK VC C A MGEP L LYD L A + + F DE+EI+EGL HV SALP
Sbjct: 368 VFGPTLDELVMVLVRLMRFPEDLDQRTEDQVSDIKQHRYDVADVLRDCCQVLGAVHCLGRAVAALEGELAALRAAPGGAEA----------------------WHMAEACLFAARSVAQGVPSHDEDAVPRLLAALPRLPPSSPHLRYTANLVVGRYSRWLKHHPDTLGPMFNYLMGGFQTRDCAAAAATAIKQVCHNCAALMGEPALALYDHLQAAKANIQVSESFHDEIEILEGLCHVASALP 590
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI) HSP 1 Score: 220 bits (561), Expect = 1.580e-62 Identity = 121/247 (48.99%), Postives = 158/247 (63.97%), Query Frame = 1
Query: 4 FIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGFGTPECAAAAATAIKNVCQACGAQMGEPVLDLY----DQLLARRE-MLPFRDELEIVEGLSHVVSALPPD 729
F P L +L+ VL+ LMRYPED D+L D+IDDLKRHRYDV D+L D +LG V CLR +V L++E+ +L ALA + WQGVEA LF RS+ R +P+ E VP ++ +L +LP N HVRYTA L+VG+Y++WL+ HPEHL +MF FL+ GF +PE AAATAIKNVC +CG MGE VL L ++ AR E + +DELE+++GLS+VVS L PD
Sbjct: 426 FGPCLMRLIGVLVALMRYPEDVDELAYDEIDDLKRHRYDVADVLRDVCRILGGVQCLRQVVILLDQELGTLGALARPDEPGA--------------------WQGVEACLFATRSIGRDIPTSEETIVPQIVGMLPRLPG-NHHVRYTATLIVGKYSEWLKLHPEHLTEMFAFLMEGFASPEVMPAAATAIKNVCHSCGQLMGEQVLGLLQGHLNEAKAREEHRIDIKDELELLQGLSYVVSTLAPD 651
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: B7FP09_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP09_PHATC) HSP 1 Score: 135 bits (340), Expect = 1.230e-32 Identity = 82/242 (33.88%), Postives = 128/242 (52.89%), Query Frame = 1
Query: 1 TFIPYLRQLVHVLIR-LMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGFGTPECAAAAATAIKNVCQACGAQ---MGEPVLDLYDQLLARREMLPFRDELEIVEGLSHVVS 714
+ P+L QL+ V I+ LMRYP D D + D +D+L RHR+ V + + DC +LG + L+ + L++E+ + + WQG+E+ L + ++ R VPSDE + +P L+ QLP + +RYTA+ +G++A WL HP L+ + +L G PECA AAA AIK +C+ C Q + EPV++L+ L L DEL+I+EG+ +S
Sbjct: 321 AYTPHLLQLIDVCIKSLMRYPADMDTIPEDLLDELTRHRFYVAETVEDCCRLLGGQNVLQRIGNLLQQEIHAASG--------------------------NQVWQGLESCLACIGAIHRFVPSDEAELLPLTFQLVPQLPTEIRPLRYTASKTIGKFASWLAFHPHLLQPLMPYLAQGLSVPECAPAAAVAIKELCE-CSNQSFAIAEPVMELFQGLTPGT--LEVEDELQILEGVCRALS 533
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A4Q1BI04_TREME (Importin N-terminal domain-containing protein n=2 Tax=Tremella mesenterica TaxID=5217 RepID=A0A4Q1BI04_TREME) HSP 1 Score: 119 bits (298), Expect = 4.960e-27 Identity = 76/239 (31.80%), Postives = 125/239 (52.30%), Query Frame = 1
Query: 22 QLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAA-DPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGFGTPE--CAAAAATAIKNVCQACGAQMGEPVLDLYDQLLARREMLPFRDELEIVEGLSHVVSALPPD 729
+L ++IR + +P D + TS + ++ + R+ +GD L DC +LGA CLR+ + + L+AL++ PQ WQ +EA LF +RS+ V D+ + +P +M LL +LP + +RY A LV+ RY W+ HP++L ++ +GF PE AAAA A+K +CQ CG+ + + L+D + R+ L D LE+ E + HV+ + P+
Sbjct: 367 ELQKIIIRHLSFPSDDEGQTSQEKEEFRYFRHRMGDTLKDCCHLLGAPTCLRVSLNLV------LSALSSPSPQ-----------------------WQEIEAPLFSMRSMGAEVDPDDDEVLPHIMELLPRLP-DHPRIRYAAILVLSRYTQWIDRHPQNLEFQLQYISSGFQMPEDEVQAAAAQAMKFMCQDCGSHLVPFLPQLHDFVTQMRDRLDQADLLEVCEAIGHVIERMEPE 575
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A2K1JUE4_PHYPA (Importin N-terminal domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JUE4_PHYPA) HSP 1 Score: 117 bits (294), Expect = 1.710e-26 Identity = 85/252 (33.73%), Postives = 126/252 (50.00%), Query Frame = 1
Query: 1 TFIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEH---LRQMFGFLLAGFGTPECA-AAAATAIKNVCQACG---AQMGEPVLDLYDQLLARREM--LPFRDELEIVEGLSHVVSALPPD 729
TF P LV ++ + YP + D++ D K RY V D+L D A VLG + LRLL L + AS + W+ EA L+ +R++ + VP+ E +P V+ LL QLP+Q + YT++L + YADWL P L + L + PE A AAAA A+K+VC AC A + +L++Y Q+++ + L DEL+++EG+S +VSALPPD
Sbjct: 409 TFRPTFELLVSLVSCRVTYPPGFETWRKDELADFKSTRYAVADMLMDAAAVLGGQETLRLLAQPLLQLAASARGGGS------------------------WDWRAAEASLYCIRAIGKAVPAREDAYMPQVLALLSQLPSQPQLI-YTSSLTIAAYADWLGGSPNAPTLLPSLLQLLTSALSAPEDACAAAALALKHVCDACRKLLAGSADALLNVYQQVMSGKSNFNLSSDDELQLIEGMSLMVSALPPD 635
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A164XM25_9AGAM (ARM repeat-containing protein n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164XM25_9AGAM) HSP 1 Score: 117 bits (293), Expect = 2.300e-26 Identity = 73/243 (30.04%), Postives = 112/243 (46.09%), Query Frame = 1
Query: 1 TFIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGF--GTPECAAAAATAIKNVCQACGAQMGEPVLDLYDQLLARREMLPFRDELEIVEGLSHVVSALP 723
F+ + LV ++I+ +R+P DA L + DD + R+ +GD L DC VLGA CL + +A WQ +EA LF +RS+ V + + P +M LL QLP + +RY A LV+GRY +W HP+H+ +L +GF E AAAA A+K +C+ C + + LY L D +++ E ++HV+S +P
Sbjct: 355 VFLDAYKALVEIIIKHLRFPNDAQDLVGQEADDFRSFRHVIGDTLKDCCYVLGADVCLMRAYEMVVNAIA----------------------LGNSGSGANISWQEIEAPLFSMRSMGGEVDVRDDEITPRIMDLLPQLP-NHPRIRYAAMLVIGRYTEWTNMHPQHIAFQLTYLSSGFEDSDSEVAAAAGQAMKYLCKDCKRHLVPSLPQLYAFYTTAAPKLSQDDRVQVCEAIAHVISYMP 574
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A316VUH6_9BASI (ARM repeat-containing protein n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A316VUH6_9BASI) HSP 1 Score: 115 bits (288), Expect = 1.080e-25 Identity = 75/247 (30.36%), Postives = 119/247 (48.18%), Query Frame = 1
Query: 4 FIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVA-SLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFL---LAGFGTPECAAAAATAIKNVCQACGAQMGEPVLDLYDQLLA-RREMLPFRDELEIVEGLSHVVSALPPD 729
F+ L+ ++I+L+R+P+D D +S + D + R+ VGD L DC VLGA +CL + +E +A S A AA Q WQ +EA LF +R++ + P +M ++ LP + V+Y LV+ RY +W+ HPE + + ++ L+G E AAAA AI +CQ C + + LY+ LP D + + EG++ VV+A+P D
Sbjct: 367 FLEIFENLLSIVIKLLRWPDDVDTASSSSVADHRDFRHFVGDTLKDCCYVLGATECLGKSLQMVEALLAQSQQAAAAGAQGPK--------------------WQDIEAPLFSMRAMGSEADMRDNNVTPRIMDIVASLP-DHPKVKYAGLLVISRYTEWVAGHPERIPTLLSYISSGLSGAQVDETGAAAAQAILYLCQDCAPHLVAYLPQLYEFFTGLNTSALPASDLIPVTEGIASVVAAMPTD 592
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A7D8ZFA0_9TREE (Importin N-terminal domain-containing protein n=1 Tax=Vanrija humicola TaxID=5417 RepID=A0A7D8ZFA0_9TREE) HSP 1 Score: 113 bits (283), Expect = 4.930e-25 Identity = 74/246 (30.08%), Postives = 121/246 (49.19%), Query Frame = 1
Query: 1 TFIPYLR---QLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGF--GTPECAAAAATAIKNVCQACGAQMGEPVLDLYDQLLARREMLPFRDELEIVEGLSHVVSALP 723
F PY++ QL +IR + +P D++ T+ + D+ + R+ +GD L DC VLGA CL+ + + A P WQ +EA LF +RS+ V D+ + +P +M LL +LP ++ +RY A LV+ RY W+ HP++L G++ AGF E +AAAA A+K +CQ C + + L+ + + L D +E+ E +++V+ LP
Sbjct: 362 NFAPYVQIFGQLQTTIIRHLHFPADSESQTAQERDEFRTFRHRMGDTLKDCCQVLGASACLK-------KSYDLVIEAMAKPTPS---------------------WQEIEAPLFSMRSMGAEVDPDDDEVMPHIMDLLPKLP-EHPRIRYAAILVISRYTQWIDRHPQNLAFQLGYVSAGFDMAEDEVSAAAAQAMKFLCQDCNRHLVPFLPQLHTFVTTVGQKLDQADMVEVCEAIAYVIQTLP 578
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A507CDN5_9FUNG (Importin N-terminal domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CDN5_9FUNG) HSP 1 Score: 113 bits (283), Expect = 4.960e-25 Identity = 74/242 (30.58%), Postives = 122/242 (50.41%), Query Frame = 1
Query: 7 IPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEHLRQMFGFLLAGFGTPECAAAAATAIKNVCQACGAQMGEPVLDL---YDQLLARREMLPFRDELEIVEGLSHVVSALP 723
IP +L ++I+ ++YP D + T+ + D+ + R+ +GD+L DC V+G P L R A L WQ +EA LF +R++ + E +P +M+ L QLP+ ++ V+Y A LV+GRYA+W R HP ++ F+ GF E AAAA A+K +C++CG + + + +L Y+QL+ R L D ++ E + HV++A+P
Sbjct: 372 IPTYIRLTDIMIKHLKYPSDLGRWTALERDEFRDFRHVMGDVLKDCVRVVGEG-------PALARPHAMLKGFMLTSTQGGDQPPTLDPSIP---------WQSIEAPLFALRTMGTCISHTENVYLPEIMSWLPQLPS-HSKVKYAAILVIGRYAEWTRLHPNYIPYQLNFISKGFDDAESTAAAAQAMKFLCESCGVLLVDYLNELHPFYNQLMTR---LDRSDRRDVAEAIGHVIAAVP 593
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Match: A0A2R6W1F3_MARPO (Importin N-terminal domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W1F3_MARPO) HSP 1 Score: 112 bits (281), Expect = 9.190e-25 Identity = 88/252 (34.92%), Postives = 125/252 (49.60%), Query Frame = 1
Query: 4 FIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGVLGAVDCLRLLVPELEREVASLAALAADPQXXXXXXXXXXXXXXXXXXXXXXXWQGVEAYLFGVRSLARGVPSDEGQAVPAVMTLLLQLPAQNAHVRYTANLVVGRYADWLRDHPEH---LRQMFGFLLAGFGTPE--CAAAAATAIKNVCQACGAQMGEPV---LDLYDQLLARREM--LPFRDELEIVEGLSHVVSALPPD 729
F P LV ++ + YP + D++ D K+ RY V D+L D A VLG LRLL L + A++ W+ VEA L+ +R++A+ VP E +P V+ +L +LP Q + YT++L V ADWL P L + G L PE CAAAA A+K+VC AC ++G+ V L+LY Q+++ + L DEL++VEGLS VVSALP D
Sbjct: 399 FKPTFELLVSLVSFRVTYPAGFEAWRKDELADFKQTRYAVADMLLDAAAVLGGDATLRLLSQPLLQMAANV------------------------DNGGSWEWRSVEASLYCIRAIAKAVPLSENLILPQVLGILSKLPPQ-PQLLYTSSLTVASLADWLGVAPSARPLLPLLLGLLTNALSVPEDPCAAAA-LALKHVCDACSKELGQSVEALLELYRQVMSGQGNFHLASEDELQLVEGLSIVVSALPAD 624 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15153.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15153.1.1 >prot_P-wetherbeei_contig15153.1.1 ID=prot_P-wetherbeei_contig15153.1.1|Name=mRNA_P-wetherbeei_contig15153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp TFIPYLRQLVHVLIRLMRYPEDADQLTSDQIDDLKRHRYDVGDLLNDCAGback to top mRNA from alignment at P-wetherbeei_contig15153:134..1640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15153.1.1 ID=mRNA_P-wetherbeei_contig15153.1.1|Name=mRNA_P-wetherbeei_contig15153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1507bp|location=Sequence derived from alignment at P-wetherbeei_contig15153:134..1640+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15153:134..1640+ >mRNA_P-wetherbeei_contig15153.1.1 ID=mRNA_P-wetherbeei_contig15153.1.1|Name=mRNA_P-wetherbeei_contig15153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig15153:134..1640+ (Phaeothamnion wetherbeei SAG_119_79)back to top |