mRNA_P-wetherbeei_contig15053.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Match: A0A848XR02_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A848XR02_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.860e-14 Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 1
Query: 55 ALVGGAIVALAAGIIPADESAFHAPHWVIGACGFVFMIAGFLV--------VVPETMSRMKN-------FLAAVMLSLFAAIPGWIAFGSGPRVFGGSISFGAMTSATHPGEMVGRIAFGFGAVLLGLCAAYVWWKWLR 426
A VG IV ++ G IP D ++ HAP WV+G G VFM+ G L+ + P+ + ++ F+ AV++S F AI W+ FG GPR F G ++ G+ T GR FG VL L A +WW+ L+
Sbjct: 25 AAVGLVIVFVSLGWIPVDPASVHAPMWVLGLAGLVFMLPGLLMCYYGIRNGLAPDGTTFVEKPWGGPGWFVGAVIISAFGAIGLWVGFGEGPREFSGGVT-GSPTE--------GRFVFGSMGVLCTLLAGGIWWRGLK 154
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Match: A0A6N6L3W3_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N6L3W3_9CHLR) HSP 1 Score: 71.6 bits (174), Expect = 4.560e-13 Identity = 46/134 (34.33%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 58 LVGGAIVALAAGIIPADESAFHAPHWVIGACGFVFMIAGFLVVVPETMSRMKN----------FLAAVMLSLFAAIPGWIAFGSGPRVFGGSISFGAMT-SATHPGEMVGRIAFGFGAVLLGLCAAYVWWKWLR 426
L+G IV L+ IIP+DESAFHAP WV+ G VF +AG V+ + + ++ + + LS FA + W+AFG G R F S+S ++ T GR FG A++L + Y + +L+
Sbjct: 9 LMGAFIVLLSLDIIPSDESAFHAPRWVVAVAGGVFKVAGMAVIWQNSFTHLQETTWYQTVSHLLIGGIFLS-FALVFNWVAFGPGEREFSSSVSIPFISVENTGSNASSGRFFFGVFALMLDIGVIYALYFYLK 141
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Match: A0A1B6Y8U2_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y8U2_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 3.170e-12 Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 1
Query: 13 QMTPAARNAVAVICALVGGAIVALAAGIIPADESAFHAPHWVIGACGFVFMIAGFLVVVPETMSRMKNFLAAVMLSLFAAIPGWIAFGSGPRVFGGSISFGAMTSATHPGEMVGRIAFGFGAVLLGLCAAYVWWKWLR 426
+++PA + + L G + + GIIP D+ +AP WV+G CGFVF +AG ++++ E S + + L+ +++ F I GWIAF F G F + T + R FG G++L A Y ++L+
Sbjct: 4 KLSPAKTKLFSWLFILTGLFFILIGIGIIPVDDPTLNAPKWVVGLCGFVFSLAGVIILIGEK-SPINHLLSGLLVLSFGCIGGWIAFYGEAAHFSGGTPFLSNTQNVW----IARTLFGSGSLLCFAVAFYTILQYLK 136
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Match: A0A1J5RYJ1_9ZZZZ (Uncharacterized protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5RYJ1_9ZZZZ) HSP 1 Score: 68.6 bits (166), Expect = 6.850e-12 Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 13 QMTPAARNAVAVICALVGGAIVALAAGIIPADESAFHAPHWVIGACGFVFMIAG--FLVVVPETMSRMKNFLAAVMLSLFAAIPGWIAFGSGPRVFGGSISFGAMTSATHPGEMVGRIAFGFGAVLLGLCAAYV 408
M+P AR +A+ GG + A IP+ A P WVI A +F + G L++ E M+ ++N ++ + + A W+AFG+G R F S SF +T+ GE+ GR+AFGF AVL+ L V
Sbjct: 9 SMSPRARVFMALAFFFFGGFLFAFVLDWIPSKHVA---PLWVIAAAAMMFSLGGAMILLIENERMAWLRNLVSWLFVVCLAIPFNWVAFGAGERQFSSSSSFLGITTGGASGEIEGRVAFGFFAVLMDLMVVLV 139
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Match: UPI0017AC4CB9 (Uncharacterized protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0017AC4CB9) HSP 1 Score: 62.8 bits (151), Expect = 1.490e-9 Identity = 56/163 (34.36%), Postives = 75/163 (46.01%), Query Frame = 1
Query: 13 QMTPAARNAVA---VICALVGGAIVALAAGIIPADESAFHAPH---WVIGACGFVFMIAGFLVVVPETMSR----------------MKNFLAAVMLSLFAAIPGWIAFGSGPRVFGGSISFGAMTSATHPGEMVGRIAFGFGAVLLGLCA---AYVWWKWLR 426
+ P +RN + ++ A VG IV + G+I E H P WV G +F++AG +V+V R ++ + VM + FA I WIAFG GPR F +I F A A E+VGR AFGFGA+L C A W LR
Sbjct: 3 EQKPLSRNGMVWAGLLAAGVGLVIVLMVLGVI--GEPPKHPPKTPIWVAVLAGGLFLLAGLVVLVNALTGRDPGAEVPPFAPFWPRLLQVLVGVVMFASFAVIGSWIAFGPGPRNFETNIPFLASGVAN---ELVGRCAFGFGAILTWACTLLVALAGWSKLR 160
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Match: A0A345ZH48_9GAMM (Uncharacterized protein n=1 Tax=Lysobacter sp. TY2-98 TaxID=2290922 RepID=A0A345ZH48_9GAMM) HSP 1 Score: 51.6 bits (122), Expect = 1.500e-5 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 61 VGGAIVALAAG---IIPADESAFHAPHWVIGACGFVFMIAG-FLVVVPETMSRMKNFLAAVMLSLFAAIPGWIAFGSGPRVFGGSISFGAMTSATHPGEMVGRIAFGFGAVLL 387
VG +V +AAG ++ AP WV+ +F +AG LV + + +L V+L +PGWIAFGSGPR +++FGA + + E+V R AFG GA++L
Sbjct: 10 VGIGLVIVAAGMAALVHGHPEQLKAPAWVVFTALGLFGLAGRCLVGQALRLEGLVRWLVCVLLGAMIIVPGWIAFGSGPRQCT-TLAFGARIATS---EVVCRGAFGAGALIL 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15053.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15053.2.1 >prot_P-wetherbeei_contig15053.2.1 ID=prot_P-wetherbeei_contig15053.2.1|Name=mRNA_P-wetherbeei_contig15053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MTPAARNAVAVICALVGGAIVALAAGIIPADESAFHAPHWVIGACGFVFMback to top mRNA from alignment at P-wetherbeei_contig15053:550..975- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15053.2.1 ID=mRNA_P-wetherbeei_contig15053.2.1|Name=mRNA_P-wetherbeei_contig15053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig15053:550..975- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15053:550..975- >mRNA_P-wetherbeei_contig15053.2.1 ID=mRNA_P-wetherbeei_contig15053.2.1|Name=mRNA_P-wetherbeei_contig15053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig15053:550..975- (Phaeothamnion wetherbeei SAG_119_79)back to top |