mRNA_P-wetherbeei_contig1467.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A835YU89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU89_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.330e-57 Identity = 141/330 (42.73%), Postives = 185/330 (56.06%), Query Frame = 1
Query: 442 NPQAAKEAIGIALEKATASAKELTELALELTEKAS-----VAQELTGRRKVKDNEESFTVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGLAPEAAGKLRLDSIYPVNGFKRYVDNED------GYELLLPQDWVADPA----------------VALQDERDRVRPLDPLSVAE-------IQRRQRK-RGGIRPD--------------------AAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRGAGT--VYQFEYTIR 1260
+P+ +E A+E T + E A ++ K VA G+ + ++ESF+VTTYFFGKD EFWED++RNGV PRR FLY L A +AVGGNLFG+TS+LLG AP+ A + +LD +YPV GFKR V+ + G+E + P +W+AD A VAL ++ +RVR LDP SV + ++RRQR+ RGG R D AAFGPPG A ENVSV++S L+ GF+L GTLG P+ AA +LL IAP GSG+EA L++A AE R G VY FEYTI+
Sbjct: 21 DPEEMREMSKAAIEAVTKAGVNAEEAARDIAVKIGEAGLDVATGNLGKNQPSLDDESFSVTTYFFGKDNEFWEDMQRNGVQPRRFFLYTGLSAAVAVGGNLFGVTSALLGAAPKLAERSQLDVLYPVKGFKRCVNKGESESESHGFEFVYPHEWLADQAXXXXXXXXXXXXXXXAVALAEQAERVRQLDPPSVEDAVRVEDAVRRRQRQVRGGKRQDRQSHVEDAVRRRRGRALVPLAAFGPPGASGAGA---------ARENVSVVRSALERGFSLRGTLGAPEAAARRLLDEAIAPEGSGREAELLSAVAEARAGGVPEVYVFEYTIK 341
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: D8LPY6_ECTSI (PsbP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY6_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.360e-56 Identity = 126/273 (46.15%), Postives = 173/273 (63.37%), Query Frame = 1
Query: 478 LEKATASAKELTELALELTEKASVAQELT-----GRRKVKDNEES--FTVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLG-LAPEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLDPL--SVAEIQRRQRKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRG-AGTVYQFEYTIRG 1263
LEKATA E TE+ L+ + A++A+ + G+ + + EE+ F V+TYFFGK+ E W+D+ NGV+ R Y LG +A+GGNLFG+TS+LLG +APEA+ LR+D ++P+ GFKR+ EDGYE + P WV D +AL+ +RD L+ L S A + R +++R P+ AFGP GG ENVSV+KS L PGF+L TLG P+EAA K+L+TVIAPPGSG+E L+ AF + R G VYQFEY ++G
Sbjct: 203 LEKATA---ESTEMVLD-SAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGKENELWDDMRANGVTRERFVRYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLALRRQRD----LEDLRASPAAVARARQRRSSSAPEVAFGPQGGD-------------GIENVSVVKSELMPGFSLKRTLGDPKEAAEKILSTVIAPPGSGREWELLEAFEDNREPGGLVYQFEYRVQG 454
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A6H5KJV3_9PHAE (PsbP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV3_9PHAE) HSP 1 Score: 206 bits (524), Expect = 3.530e-56 Identity = 129/273 (47.25%), Postives = 172/273 (63.00%), Query Frame = 1
Query: 478 LEKATASAKELTELALELTEKASVAQELT-----GRRKVKDNEES--FTVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLG-LAPEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLDPL--SVAEIQRRQRKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRG-AGTVYQFEYTIRG 1263
LEKATA E TE+ L+ + A++A+ + GR + + EE+ F V+TYFFGK+ E W D+ NGV+ R LY LG +A+GGNLFG+TS+LLG +APEA+ LR+D ++P+ GFKR+ EDGYE + P WV D +AL+ +RD L+ L S A + R +++R P+ AFGP GG TENVSV+KS L PGF+L TLG P+EAA K+L+TVIAPP SG+E L AF + R G VYQFEY I+G
Sbjct: 299 LEKATA---ESTEMVLD-SAAAALAKGIDKVVNEGRDAIPEGEETEKFQVSTYFFGKENELWNDMRANGVTRERFVLYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKRFYSPEDGYEFIYPDTWVGDSGLALRRQRD----LEDLRASPAAVARARQRRSSSAPEVAFGPQGGD-------------GTENVSVVKSELMPGFSLRRTLGDPKEAAEKILSTVIAPPDSGREWELFEAFEDNREPGGLVYQFEYRIQG 550
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A4D9CU31_9STRA (PsbP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU31_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.610e-42 Identity = 106/229 (46.29%), Postives = 130/229 (56.77%), Query Frame = 1
Query: 613 YFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGL--APEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLD-PLSVAEIQRRQ-----RKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRGAG------TVYQFEYTI 1257
YFFG EF EDL G+S +R+ L + +A+G N G+TS+LL PE L+LD +YPV GFKR+VD +DGYE PQ W++D AV L D + R L P S ++ R RK +RPDAAFGPPGG EN+SVIKS + PGF+L TLGPP AA LL+T IAPPGSGK A+LV A E R G VY FEY +
Sbjct: 3 YFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDLKLDVLYPVRGFKRFVDTDDGYEFRYPQSWLSDQAVLLADTQARTATLSSPSSPSDRPPRAPPSSTRK---VRPDAAFGPPGGNRE-------------ENLSVIKSVVMPGFSLAETLGPPTAAAELLLSTAIAPPGSGKVASLVMAQEETRDIGGKTLERKVYVFEYLV 215
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: K8YRA7_NANGC (PsbP domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YRA7_NANGC) HSP 1 Score: 160 bits (405), Expect = 4.060e-41 Identity = 104/230 (45.22%), Postives = 127/230 (55.22%), Query Frame = 1
Query: 601 TVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGL--APEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLD-PLSVAEIQRRQRKRG--GIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRGAG------TVYQFEYTI 1257
T YFFG EF EDL G+S +R+ L + +A+G N G+TS+LL PE +LD +YPV GFKR+VD EDGYE PQ W++D A+ L D + R L P S ++ R +RPDAAFGPPGG EN+SVIKS + PGF+L TLGPP AA LL+T IAPPGSGK A LV A E R G VY FEY +
Sbjct: 100 TAKEYFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDWKLDVLYPVRGFKRFVDTEDGYEFRYPQSWLSDQAILLADTQARTATLSSPSSPSDRPPRAPPSSTRAVRPDAAFGPPGGNRE-------------ENLSVIKSVVMPGFSLAETLGPPTAAAELLLSTAIAPPGSGKVANLVMAQEETRDGGGKTLERKVYVFEYLV 316
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A7R9UDX8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDX8_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.730e-40 Identity = 103/225 (45.78%), Postives = 126/225 (56.00%), Query Frame = 1
Query: 592 ESFTVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGLAPEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRV-RPLDPLSVAEIQRRQRKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRGAGTVYQFEYTIRG 1263
E ++ Y FGK E DL G S R+ L + +A GGNL G+TS+ L P A L LD +YPV GFKRY D ED +E + P W+ D AV L R P +P+ +I RR R G+ P AFGP G A ENVSVIK L PGF+L GTLG P+EAA KLL + IAPPGSGK+ATLV A A RR + Y+FE+T+ G
Sbjct: 74 EDVSLKDYVFGKPGELKRDLGALGTSVERIAASIFLSSVVAFGGNLGGVTSAALSTMPVQARSLGLDLLYPVAGFKRYRDPEDRFEFIYPYRWLEDQAVVLARTTARAGNPAEPILGMKIPRRVR---GVIPRVAFGPAGRED------------ALENVSVIKQTLLPGFSLRGTLGEPEEAAQKLLDSSIAPPGSGKDATLVRAQAARRNSLEEYEFEWTVEG 283
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A7S1HVX3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HVX3_9EUGL) HSP 1 Score: 145 bits (367), Expect = 7.160e-37 Identity = 95/209 (45.45%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 592 ESFTVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGLAPE----AAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLDPLSVAEIQRRQRKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNA 1206
E+ +++ Y FGK EF DLE G +PRR+ L +A+GGN G+TS LL L PE A G LD YPV G KRY ++ GY+ + PQ+WVAD AVAL ++ V+ LDP S RR+ + + PD AFGP G +ENVSVI S + GF+L GTLGPP +AA LL TV+AP SGK ATL+ A
Sbjct: 62 EADSLSEYVFGKPGEFQRDLELVGTTPRRLLLGAGGATALALGGNFVGVTSGLLSLLPEDTIQATG---LDQAYPVRGVKRYRSDQLGYDFVYPQEWVADQAVALAKQQLGVQSLDPASP----RRKPRAPQVIPDCAFGPMGNLNRQGRNT------TSENVSVIASDVMAGFSLQGTLGPPDKAAQVLLDTVLAPANSGKHATLLGA 257
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A7S0EAT0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EAT0_9EUKA) HSP 1 Score: 134 bits (337), Expect = 8.800e-33 Identity = 92/206 (44.66%), Postives = 114/206 (55.34%), Query Frame = 1
Query: 667 SPRRVFLYGTLGAGIAVGGNLFGLTSSLLGLAPEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQ--DERDRVRPLDPLSVAEIQRRQRKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRGAGT---VYQFEYTIRGTA 1269
SPRR+ IA+ N G+TS LL L PEAA + RLD YPV GFKR+ D + Y + P +VAD V L+ D R DPL A R PD AFGPPG A EN+SV+ PL+PG +LLGTLGPP++AA KLL IA PG +E TL++A +ERR AG+ +Y FEY +RG A
Sbjct: 1 SPRRIATATLSSTAIALAANFLGVTSGLLSLFPEAARQQRLDVAYPVRGFKRHFDPQGRYTFIFPMRYVADQTVYLRNADAAYSRRTQDPLLAASGLRATPAAKSSGPDVAFGPPG-------------TSAEENLSVVSGPLRPGSSLLGTLGPPEQAADKLLRERIAKPGE-REVTLLHA-SERRSAGSGLPLYAFEYQVRGLA 191
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A8J2X277_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X277_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.210e-32 Identity = 95/227 (41.85%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 592 ESFTVTTYFFGKDREFWEDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGLAP----EAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLDPLSVAEIQRRQRKRGGIRPDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQPGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRGAGTVYQFEYTIR 1260
E TY FGK E D+ R G SPRR+ L+G LG IA+ G+LF LTS+LL +AP +AA + RLD+ YP+ FKRY+D+E G+E+ P+ W+AD A+ + R + R AE R RK+ G A FGPPGG EN+SV +SP+ G L LG P E A +LL T +APP SGK+ TL+ A G+ Y FEY ++
Sbjct: 58 EKVDAMTYVFGKPGELQGDMARMGTSPRRLALFGLLGLFIALAGDLFRLTSTLLRIAPGGVQDAARRARLDTYYPIGDFKRYIDDEYGFEVRYPEMWLADQAIYVS--RMQARTGAGAVDAEALLRSRKQKGPAALAGFGPPGGGKF-------------ENLSVFRSPVMAGLKLRN-LGTPTEFAQRLLDTAVAPPESGKKTTLLAATERADGS---YAFEYCLQ 265
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Match: A0A0G4GW09_VITBC (PsbP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GW09_VITBC) HSP 1 Score: 134 bits (337), Expect = 7.130e-32 Identity = 93/213 (43.66%), Postives = 120/213 (56.34%), Query Frame = 1
Query: 643 EDLERNGVSPRRVFLYGTLGAGIAVGGNLFGLTSSLLGLAPEAAGKLRLDSIYPVNGFKRYVDNEDGYELLLPQDWVADPAVALQDERDRVRPLDPLSVAEIQRRQRKRGGIR---PDAAFGPPGGXXXXXXXXXXSPRFATENVSVIKSPLQ--PGFTLLGTLGPPQEAAAKLLATVIAPPGSGKEATLVNAFAERRG-AGTVYQFEYTIRG 1263
+++E + ++PRR FL A +A+G NLFG+TS+LL L+PE A KLRLD IYP++GFKRYV+ DGY L PA E PL+ + + R KR + PD AFGPPGG A ENVSV+KS L+ LGPP++AA LL IAP GSGK A L++A +E+R G VY FEY +RG
Sbjct: 83 QEIEPDSITPRRRFLVLLGAAVVALGANLFGITSALLRLSPEQARKLRLDVIYPIDGFKRYVNEVDGYSYRLG------PAHRYTREAAHDAARRPLAASFDEGRPVKRAAAQSEAPDVAFGPPGGGGD-----------AKENVSVVKSTLRLTDDRAFFSLLGPPKQAAETLLREAIAPEGSGKVAMLIDALSEQREPGGEVYLFEYIVRG 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1467.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1467.1.1 >prot_P-wetherbeei_contig1467.1.1 ID=prot_P-wetherbeei_contig1467.1.1|Name=mRNA_P-wetherbeei_contig1467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=395bp MQSMRVLGMFSRENRRMWTKAPQNESRPCQLLVATMPNATMRRCRGAHSPback to top mRNA from alignment at P-wetherbeei_contig1467:2..2481- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1467.1.1 ID=mRNA_P-wetherbeei_contig1467.1.1|Name=mRNA_P-wetherbeei_contig1467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2480bp|location=Sequence derived from alignment at P-wetherbeei_contig1467:2..2481- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1467:2..2481- >mRNA_P-wetherbeei_contig1467.1.1 ID=mRNA_P-wetherbeei_contig1467.1.1|Name=mRNA_P-wetherbeei_contig1467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig1467:2..2481- (Phaeothamnion wetherbeei SAG_119_79)back to top |