mRNA_P-wetherbeei_contig14560.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A1F4F754_9PROT (ABC transporter ATP-binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F754_9PROT) HSP 1 Score: 358 bits (920), Expect = 2.550e-123 Identity = 180/237 (75.95%), Postives = 206/237 (86.92%), Query Frame = 1
Query: 16 INSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
++ LL+EA GL+TYYG+SH+L GVD I GE++GLMGRNGMGK+TLL+T++GLVR R G V+++G D T A HRIA+ G+AYVPEGRGIFPNLSV ENL+MAAR G+ GRRDWT ERVLETFPR+AER+ HGG +LSGGEQQMLTIGRALMTNP+LLILDEATEGLAP IAREI IV VRESGIATVIVDKNFAAVN+ITDRN+ILVKGEVVY GPA ELR +PDVH RYLGV
Sbjct: 1 MSELLVEATGLHTYYGSSHVLRGVDLRIGCGESIGLMGRNGMGKTTLLRTIIGLVRSREGRVRIRGRDATREAAHRIARMGVAYVPEGRGIFPNLSVHENLIMAARPGSEGRRDWTLERVLETFPRLAERMRHGGGQLSGGEQQMLTIGRALMTNPELLILDEATEGLAPKIAREIWTIVRKVRESGIATVIVDKNFAAVNSITDRNLILVKGEVVYEGPAAELRERPDVHQRYLGV 237
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A521V320_9PROT (ABC transporter ATP-binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521V320_9PROT) HSP 1 Score: 351 bits (901), Expect = 1.990e-120 Identity = 179/237 (75.53%), Postives = 202/237 (85.23%), Query Frame = 1
Query: 16 INSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
++ LL+EA GL+TYYG+SH+L GV I R E++GLMGRNGMGK+TLL+T++GLVR R G V ++G D T HRIA+ GIAYVPEGRGIFPNLSV+ENLVMAARAG+ GRRDWT ERVL TFPR+AERI H G +LSGGEQQMLTIGRALMTNPDLLILDEATEGLAP IAREI IV VR SGIATVIVDKNFAAVNAITDRN+ILVKGEVVY G A +LRAKP++H RYLGV
Sbjct: 1 MSELLVEATGLHTYYGSSHVLQGVGLRIGRAESIGLMGRNGMGKTTLLRTIIGLVRAREGRVLIRGRDATREPAHRIARMGIAYVPEGRGIFPNLSVRENLVMAARAGSDGRRDWTQERVLATFPRLAERIRHAGGQLSGGEQQMLTIGRALMTNPDLLILDEATEGLAPKIAREIWSIVRTVRASGIATVIVDKNFAAVNAITDRNLILVKGEVVYEGEAADLRAKPEIHHRYLGV 237
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A4Y7BFZ0_9BURK (ABC transporter ATP-binding protein n=3 Tax=Comamonadaceae TaxID=80864 RepID=A0A4Y7BFZ0_9BURK) HSP 1 Score: 350 bits (899), Expect = 4.020e-120 Identity = 176/235 (74.89%), Postives = 204/235 (86.81%), Query Frame = 1
Query: 22 SLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
++LIEA+GL TYYGASHIL GVDF++ RGE +GLMGRNGMGKSTLLK+L+GLV+PR G+V + G D+T P+ IAQ GIAYVPEGRGIF NLSV ENL MAAR GT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI G++RESGI++VIVDKN+ V ITDRNVILVKGEVV+AG +DELR+KP + +YLGV
Sbjct: 3 AMLIEAKGLQTYYGASHILRGVDFNVARGETIGLMGRNGMGKSTLLKSLMGLVKPRGGTVSIMGRDMTGRPPYEIAQLGIAYVPEGRGIFGNLSVVENLKMAARPGTKGQRDWTYERVLETFPRLTERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGVIRESGISSVIVDKNWKHVTQITDRNVILVKGEVVFAGTSDELRSKPQLLEQYLGV 237
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A844AXA5_9BURK (ATP-binding cassette domain-containing protein n=1 Tax=Caenimonas koreensis DSM 17982 TaxID=1121255 RepID=A0A844AXA5_9BURK) HSP 1 Score: 349 bits (896), Expect = 1.230e-119 Identity = 178/234 (76.07%), Postives = 201/234 (85.90%), Query Frame = 1
Query: 25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
LLIE GLNTYYGASHIL GVDFS+RRGE +GLMGRNGMGKSTLLKTL+GLV PRSGSVKV G D+ P+ +AQ GIAYVPEGRGIF NLSV ENLVMA+RAGT G+RDWTYERVL+TFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI L+RESGI++VIVDKN+ V +TDRNVILVKGEVV+ G +D LR +P + +YLGV
Sbjct: 6 LLIEGTGLNTYYGASHILRGVDFSVRRGETIGLMGRNGMGKSTLLKTLMGLVPPRSGSVKVMGRDMVGRPPYEVAQLGIAYVPEGRGIFGNLSVVENLVMASRAGTRGQRDWTYERVLDTFPRLKERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICALIRESGISSVIVDKNWKHVTQVTDRNVILVKGEVVFNGSSDALREQPQLLDQYLGV 239
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A0Q5ZD94_9BURK (ABC transporter ATP-binding protein n=2 Tax=Ramlibacter TaxID=174951 RepID=A0A0Q5ZD94_9BURK) HSP 1 Score: 348 bits (892), Expect = 4.670e-119 Identity = 172/234 (73.50%), Postives = 206/234 (88.03%), Query Frame = 1
Query: 25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
LLI+ARGL+TYYG SH+L G+DF + GE +GLMGRNGMGKSTLLKTL+GLV+PR+G+V V+G D+T AP+ IAQ G+AYVPEGRGIF NLSV ENL MAARAGT G+RDWTYERVLETFPR++ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI GL+RESGI+TVIVDKN+ V +T+RN+ILVKGEVV++G + ELR++P+V ++LGV
Sbjct: 4 LLIDARGLHTYYGQSHVLRGIDFQVGPGETIGLMGRNGMGKSTLLKTLMGLVKPRAGTVHVRGRDMTGCAPYEIAQKGVAYVPEGRGIFGNLSVVENLKMAARAGTRGQRDWTYERVLETFPRLSERLSHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGLIRESGISTVIVDKNWKHVTQLTNRNLILVKGEVVFSGTSQELRSRPEVLTQHLGV 237
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: UPI001FADB283 (ABC transporter ATP-binding protein n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FADB283) HSP 1 Score: 347 bits (890), Expect = 9.420e-119 Identity = 176/234 (75.21%), Postives = 202/234 (86.32%), Query Frame = 1
Query: 25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
LLIEA+GL TYYGASHIL GVDF + RGE +GLMGRNGMGKSTLLK+L+GLVRPR G+V V G D+T AP+ IAQAGIAYVPEGRGIF NLSV ENL MAAR GT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI GL+RESGI++VIVDKN+ V +TDRN+ILVKG+VV+ G + EL A+P+V ++LGV
Sbjct: 4 LLIEAKGLQTYYGASHILRGVDFRVARGETIGLMGRNGMGKSTLLKSLMGLVRPRGGTVHVAGRDMTGRAPYEIAQAGIAYVPEGRGIFGNLSVVENLRMAARPGTRGQRDWTYERVLETFPRLQERLSHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGLIRESGISSVIVDKNWKHVTQVTDRNLILVKGQVVFEGSSAELHARPEVLAQHLGV 237
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A4Q3NFJ1_9BURK (ABC transporter ATP-binding protein n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A4Q3NFJ1_9BURK) HSP 1 Score: 347 bits (890), Expect = 1.710e-118 Identity = 175/233 (75.11%), Postives = 204/233 (87.55%), Query Frame = 1
Query: 28 LIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
LI+ARGL TYYGASHIL GVDF++ RGE +GLMGRNGMGKSTLLK+L+GLV+PR GSV + G+D+T AP+ IAQ GIAYVPEGRGIF NLSV ENL MAARAGT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAR+I RI LVRE+GI++VIVDKN+ V ITDRNVILVKGEVVY+G + +LR++P++ +YLGV
Sbjct: 22 LIDARGLQTYYGASHILRGVDFTVARGETIGLMGRNGMGKSTLLKSLMGLVKPRGGSVHIAGKDMTGGAPYEIAQRGIAYVPEGRGIFGNLSVVENLKMAARAGTRGQRDWTYERVLETFPRLKERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIARDIWRICSLVRETGISSVIVDKNWKHVTQITDRNVILVKGEVVYSGTSQDLRSQPELLDQYLGV 254
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: UPI0010F4CDAB (ABC transporter ATP-binding protein n=1 Tax=Ramlibacter sp. 2FC TaxID=2502188 RepID=UPI0010F4CDAB) HSP 1 Score: 346 bits (888), Expect = 1.900e-118 Identity = 173/237 (73.00%), Postives = 206/237 (86.92%), Query Frame = 1
Query: 16 INSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
++ LLIEARGLNTYYGASHIL +DF++ RGE +GLMGRNGMGKSTLLKTL+GLV+PRSG V++ G D+TA+ P+ IA+ G+AYVPEGRGIF NLSV ENL MAAR GT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREI RI GL+RESGI+++IVDKN+ V ITDRN+ILVKG+VV+ G +++L A+P + +YLGV
Sbjct: 1 MSDLLIEARGLNTYYGASHILRDLDFTVARGETIGLMGRNGMGKSTLLKTLMGLVKPRSGKVQIAGRDMTASPPYEIARLGLAYVPEGRGIFGNLSVVENLKMAARPGTRGQRDWTYERVLETFPRLKERLGHGGQQLSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIWRICGLIRESGISSIIVDKNWKHVTQITDRNIILVKGQVVFEGSSEQLLAQPGLLEQYLGV 237
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A6N8IVX6_9BURK (ATP-binding cassette domain-containing protein n=1 Tax=Ramlibacter pinisoli TaxID=2682844 RepID=A0A6N8IVX6_9BURK) HSP 1 Score: 346 bits (888), Expect = 1.970e-118 Identity = 175/234 (74.79%), Postives = 205/234 (87.61%), Query Frame = 1
Query: 25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
LLIEARGL+TYYG SHIL G+DF + RGE +GLMGRNGMGKSTLLKTL+GLVRPR+GSV+V G+D+T + IAQAG+AYVPEGRGIF NLSV ENL MAAR G+ G+RDWTYERVLETFPR+AER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI ++RESGI+TVIVDKN+ V +T+RN+ILVKGEVV++G +DELRA P+V ++LGV
Sbjct: 5 LLIEARGLHTYYGQSHILRGIDFHVARGETIGLMGRNGMGKSTLLKTLVGLVRPRTGSVQVMGQDMTRRPTYEIAQAGVAYVPEGRGIFGNLSVVENLRMAARPGSRGQRDWTYERVLETFPRLAERLAHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICAVIRESGISTVIVDKNWKHVTQLTNRNLILVKGEVVFSGTSDELRAHPEVLAQHLGV 238
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A7C3JKJ5_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JKJ5_9DELT) HSP 1 Score: 346 bits (887), Expect = 2.790e-118 Identity = 171/233 (73.39%), Postives = 200/233 (85.84%), Query Frame = 1
Query: 28 LIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
+IEARGL YYG SHILHGVDFS+ GEAVGLMGRNGMGK+TLL+TLLG + PR G VK+ G +T AAPHR+A+ GIAYVPEGRGIFPNLSV+ENL+M+AR G GR DW +R+L FPR+AER+ HGG +LSGGEQQML+IGRALMTNP LLILDEATEGLAPLIAREI RI+G +RE+G+A VIVDKNFAAV+AITDRNVILVKG VV+AG + ELRA+P++ R+LGV
Sbjct: 6 IIEARGLEAYYGTSHILHGVDFSVHAGEAVGLMGRNGMGKTTLLRTLLGQITPRQGWVKINGNFMTGAAPHRVAREGIAYVPEGRGIFPNLSVRENLIMSARRGVDGRSDWHLDRILRAFPRLAERLSHGGQQLSGGEQQMLSIGRALMTNPRLLILDEATEGLAPLIAREIWRIIGAIREAGVAAVIVDKNFAAVSAITDRNVILVKGRVVFAGSSAELRAQPEITRRHLGV 238 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14560.1.1 >prot_P-wetherbeei_contig14560.1.1 ID=prot_P-wetherbeei_contig14560.1.1|Name=mRNA_P-wetherbeei_contig14560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp MSNGSINSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSback to top mRNA from alignment at P-wetherbeei_contig14560:34..762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14560.1.1 ID=mRNA_P-wetherbeei_contig14560.1.1|Name=mRNA_P-wetherbeei_contig14560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig14560:34..762+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14560:34..762+ >mRNA_P-wetherbeei_contig14560.1.1 ID=mRNA_P-wetherbeei_contig14560.1.1|Name=mRNA_P-wetherbeei_contig14560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig14560:34..762+ (Phaeothamnion wetherbeei SAG_119_79)back to top |