mRNA_P-wetherbeei_contig14560.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14560.1.1
Unique NamemRNA_P-wetherbeei_contig14560.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A1F4F754_9PROT (ABC transporter ATP-binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F754_9PROT)

HSP 1 Score: 358 bits (920), Expect = 2.550e-123
Identity = 180/237 (75.95%), Postives = 206/237 (86.92%), Query Frame = 1
Query:   16 INSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            ++ LL+EA GL+TYYG+SH+L GVD  I  GE++GLMGRNGMGK+TLL+T++GLVR R G V+++G D T  A HRIA+ G+AYVPEGRGIFPNLSV ENL+MAAR G+ GRRDWT ERVLETFPR+AER+ HGG +LSGGEQQMLTIGRALMTNP+LLILDEATEGLAP IAREI  IV  VRESGIATVIVDKNFAAVN+ITDRN+ILVKGEVVY GPA ELR +PDVH RYLGV
Sbjct:    1 MSELLVEATGLHTYYGSSHVLRGVDLRIGCGESIGLMGRNGMGKTTLLRTIIGLVRSREGRVRIRGRDATREAAHRIARMGVAYVPEGRGIFPNLSVHENLIMAARPGSEGRRDWTLERVLETFPRLAERMRHGGGQLSGGEQQMLTIGRALMTNPELLILDEATEGLAPKIAREIWTIVRKVRESGIATVIVDKNFAAVNSITDRNLILVKGEVVYEGPAAELRERPDVHQRYLGV 237          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A521V320_9PROT (ABC transporter ATP-binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521V320_9PROT)

HSP 1 Score: 351 bits (901), Expect = 1.990e-120
Identity = 179/237 (75.53%), Postives = 202/237 (85.23%), Query Frame = 1
Query:   16 INSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            ++ LL+EA GL+TYYG+SH+L GV   I R E++GLMGRNGMGK+TLL+T++GLVR R G V ++G D T    HRIA+ GIAYVPEGRGIFPNLSV+ENLVMAARAG+ GRRDWT ERVL TFPR+AERI H G +LSGGEQQMLTIGRALMTNPDLLILDEATEGLAP IAREI  IV  VR SGIATVIVDKNFAAVNAITDRN+ILVKGEVVY G A +LRAKP++H RYLGV
Sbjct:    1 MSELLVEATGLHTYYGSSHVLQGVGLRIGRAESIGLMGRNGMGKTTLLRTIIGLVRAREGRVLIRGRDATREPAHRIARMGIAYVPEGRGIFPNLSVRENLVMAARAGSDGRRDWTQERVLATFPRLAERIRHAGGQLSGGEQQMLTIGRALMTNPDLLILDEATEGLAPKIAREIWSIVRTVRASGIATVIVDKNFAAVNAITDRNLILVKGEVVYEGEAADLRAKPEIHHRYLGV 237          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A4Y7BFZ0_9BURK (ABC transporter ATP-binding protein n=3 Tax=Comamonadaceae TaxID=80864 RepID=A0A4Y7BFZ0_9BURK)

HSP 1 Score: 350 bits (899), Expect = 4.020e-120
Identity = 176/235 (74.89%), Postives = 204/235 (86.81%), Query Frame = 1
Query:   22 SLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            ++LIEA+GL TYYGASHIL GVDF++ RGE +GLMGRNGMGKSTLLK+L+GLV+PR G+V + G D+T   P+ IAQ GIAYVPEGRGIF NLSV ENL MAAR GT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI G++RESGI++VIVDKN+  V  ITDRNVILVKGEVV+AG +DELR+KP +  +YLGV
Sbjct:    3 AMLIEAKGLQTYYGASHILRGVDFNVARGETIGLMGRNGMGKSTLLKSLMGLVKPRGGTVSIMGRDMTGRPPYEIAQLGIAYVPEGRGIFGNLSVVENLKMAARPGTKGQRDWTYERVLETFPRLTERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGVIRESGISSVIVDKNWKHVTQITDRNVILVKGEVVFAGTSDELRSKPQLLEQYLGV 237          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A844AXA5_9BURK (ATP-binding cassette domain-containing protein n=1 Tax=Caenimonas koreensis DSM 17982 TaxID=1121255 RepID=A0A844AXA5_9BURK)

HSP 1 Score: 349 bits (896), Expect = 1.230e-119
Identity = 178/234 (76.07%), Postives = 201/234 (85.90%), Query Frame = 1
Query:   25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            LLIE  GLNTYYGASHIL GVDFS+RRGE +GLMGRNGMGKSTLLKTL+GLV PRSGSVKV G D+    P+ +AQ GIAYVPEGRGIF NLSV ENLVMA+RAGT G+RDWTYERVL+TFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI  L+RESGI++VIVDKN+  V  +TDRNVILVKGEVV+ G +D LR +P +  +YLGV
Sbjct:    6 LLIEGTGLNTYYGASHILRGVDFSVRRGETIGLMGRNGMGKSTLLKTLMGLVPPRSGSVKVMGRDMVGRPPYEVAQLGIAYVPEGRGIFGNLSVVENLVMASRAGTRGQRDWTYERVLDTFPRLKERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICALIRESGISSVIVDKNWKHVTQVTDRNVILVKGEVVFNGSSDALREQPQLLDQYLGV 239          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A0Q5ZD94_9BURK (ABC transporter ATP-binding protein n=2 Tax=Ramlibacter TaxID=174951 RepID=A0A0Q5ZD94_9BURK)

HSP 1 Score: 348 bits (892), Expect = 4.670e-119
Identity = 172/234 (73.50%), Postives = 206/234 (88.03%), Query Frame = 1
Query:   25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            LLI+ARGL+TYYG SH+L G+DF +  GE +GLMGRNGMGKSTLLKTL+GLV+PR+G+V V+G D+T  AP+ IAQ G+AYVPEGRGIF NLSV ENL MAARAGT G+RDWTYERVLETFPR++ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI GL+RESGI+TVIVDKN+  V  +T+RN+ILVKGEVV++G + ELR++P+V  ++LGV
Sbjct:    4 LLIDARGLHTYYGQSHVLRGIDFQVGPGETIGLMGRNGMGKSTLLKTLMGLVKPRAGTVHVRGRDMTGCAPYEIAQKGVAYVPEGRGIFGNLSVVENLKMAARAGTRGQRDWTYERVLETFPRLSERLSHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGLIRESGISTVIVDKNWKHVTQLTNRNLILVKGEVVFSGTSQELRSRPEVLTQHLGV 237          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: UPI001FADB283 (ABC transporter ATP-binding protein n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FADB283)

HSP 1 Score: 347 bits (890), Expect = 9.420e-119
Identity = 176/234 (75.21%), Postives = 202/234 (86.32%), Query Frame = 1
Query:   25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            LLIEA+GL TYYGASHIL GVDF + RGE +GLMGRNGMGKSTLLK+L+GLVRPR G+V V G D+T  AP+ IAQAGIAYVPEGRGIF NLSV ENL MAAR GT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI GL+RESGI++VIVDKN+  V  +TDRN+ILVKG+VV+ G + EL A+P+V  ++LGV
Sbjct:    4 LLIEAKGLQTYYGASHILRGVDFRVARGETIGLMGRNGMGKSTLLKSLMGLVRPRGGTVHVAGRDMTGRAPYEIAQAGIAYVPEGRGIFGNLSVVENLRMAARPGTRGQRDWTYERVLETFPRLQERLSHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGLIRESGISSVIVDKNWKHVTQVTDRNLILVKGQVVFEGSSAELHARPEVLAQHLGV 237          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A4Q3NFJ1_9BURK (ABC transporter ATP-binding protein n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A4Q3NFJ1_9BURK)

HSP 1 Score: 347 bits (890), Expect = 1.710e-118
Identity = 175/233 (75.11%), Postives = 204/233 (87.55%), Query Frame = 1
Query:   28 LIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            LI+ARGL TYYGASHIL GVDF++ RGE +GLMGRNGMGKSTLLK+L+GLV+PR GSV + G+D+T  AP+ IAQ GIAYVPEGRGIF NLSV ENL MAARAGT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAR+I RI  LVRE+GI++VIVDKN+  V  ITDRNVILVKGEVVY+G + +LR++P++  +YLGV
Sbjct:   22 LIDARGLQTYYGASHILRGVDFTVARGETIGLMGRNGMGKSTLLKSLMGLVKPRGGSVHIAGKDMTGGAPYEIAQRGIAYVPEGRGIFGNLSVVENLKMAARAGTRGQRDWTYERVLETFPRLKERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIARDIWRICSLVRETGISSVIVDKNWKHVTQITDRNVILVKGEVVYSGTSQDLRSQPELLDQYLGV 254          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: UPI0010F4CDAB (ABC transporter ATP-binding protein n=1 Tax=Ramlibacter sp. 2FC TaxID=2502188 RepID=UPI0010F4CDAB)

HSP 1 Score: 346 bits (888), Expect = 1.900e-118
Identity = 173/237 (73.00%), Postives = 206/237 (86.92%), Query Frame = 1
Query:   16 INSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            ++ LLIEARGLNTYYGASHIL  +DF++ RGE +GLMGRNGMGKSTLLKTL+GLV+PRSG V++ G D+TA+ P+ IA+ G+AYVPEGRGIF NLSV ENL MAAR GT G+RDWTYERVLETFPR+ ER+ HGG +LSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREI RI GL+RESGI+++IVDKN+  V  ITDRN+ILVKG+VV+ G +++L A+P +  +YLGV
Sbjct:    1 MSDLLIEARGLNTYYGASHILRDLDFTVARGETIGLMGRNGMGKSTLLKTLMGLVKPRSGKVQIAGRDMTASPPYEIARLGLAYVPEGRGIFGNLSVVENLKMAARPGTRGQRDWTYERVLETFPRLKERLGHGGQQLSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIWRICGLIRESGISSIIVDKNWKHVTQITDRNIILVKGQVVFEGSSEQLLAQPGLLEQYLGV 237          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A6N8IVX6_9BURK (ATP-binding cassette domain-containing protein n=1 Tax=Ramlibacter pinisoli TaxID=2682844 RepID=A0A6N8IVX6_9BURK)

HSP 1 Score: 346 bits (888), Expect = 1.970e-118
Identity = 175/234 (74.79%), Postives = 205/234 (87.61%), Query Frame = 1
Query:   25 LLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            LLIEARGL+TYYG SHIL G+DF + RGE +GLMGRNGMGKSTLLKTL+GLVRPR+GSV+V G+D+T    + IAQAG+AYVPEGRGIF NLSV ENL MAAR G+ G+RDWTYERVLETFPR+AER+ HGG +LSGGEQQMLTIGRALMTNPD+LILDEATEGLAPLIAREI RI  ++RESGI+TVIVDKN+  V  +T+RN+ILVKGEVV++G +DELRA P+V  ++LGV
Sbjct:    5 LLIEARGLHTYYGQSHILRGIDFHVARGETIGLMGRNGMGKSTLLKTLVGLVRPRTGSVQVMGQDMTRRPTYEIAQAGVAYVPEGRGIFGNLSVVENLRMAARPGSRGQRDWTYERVLETFPRLAERLAHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICAVIRESGISTVIVDKNWKHVTQLTNRNLILVKGEVVFSGTSDELRAHPEVLAQHLGV 238          
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Match: A0A7C3JKJ5_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JKJ5_9DELT)

HSP 1 Score: 346 bits (887), Expect = 2.790e-118
Identity = 171/233 (73.39%), Postives = 200/233 (85.84%), Query Frame = 1
Query:   28 LIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKSTLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNLSVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQMLTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDKNFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV 726
            +IEARGL  YYG SHILHGVDFS+  GEAVGLMGRNGMGK+TLL+TLLG + PR G VK+ G  +T AAPHR+A+ GIAYVPEGRGIFPNLSV+ENL+M+AR G  GR DW  +R+L  FPR+AER+ HGG +LSGGEQQML+IGRALMTNP LLILDEATEGLAPLIAREI RI+G +RE+G+A VIVDKNFAAV+AITDRNVILVKG VV+AG + ELRA+P++  R+LGV
Sbjct:    6 IIEARGLEAYYGTSHILHGVDFSVHAGEAVGLMGRNGMGKTTLLRTLLGQITPRQGWVKINGNFMTGAAPHRVAREGIAYVPEGRGIFPNLSVRENLIMSARRGVDGRSDWHLDRILRAFPRLAERLSHGGQQLSGGEQQMLSIGRALMTNPRLLILDEATEGLAPLIAREIWRIIGAIREAGVAAVIVDKNFAAVSAITDRNVILVKGRVVFAGSSAELRAQPEITRRHLGV 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14560.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4F754_9PROT2.550e-12375.95ABC transporter ATP-binding protein n=2 Tax=unclas... [more]
A0A521V320_9PROT1.990e-12075.53ABC transporter ATP-binding protein n=3 Tax=Betapr... [more]
A0A4Y7BFZ0_9BURK4.020e-12074.89ABC transporter ATP-binding protein n=3 Tax=Comamo... [more]
A0A844AXA5_9BURK1.230e-11976.07ATP-binding cassette domain-containing protein n=1... [more]
A0A0Q5ZD94_9BURK4.670e-11973.50ABC transporter ATP-binding protein n=2 Tax=Ramlib... [more]
UPI001FADB2839.420e-11975.21ABC transporter ATP-binding protein n=1 Tax=Variov... [more]
A0A4Q3NFJ1_9BURK1.710e-11875.11ABC transporter ATP-binding protein n=2 Tax=Comamo... [more]
UPI0010F4CDAB1.900e-11873.00ABC transporter ATP-binding protein n=1 Tax=Ramlib... [more]
A0A6N8IVX6_9BURK1.970e-11874.79ATP-binding cassette domain-containing protein n=1... [more]
A0A7C3JKJ5_9DELT2.790e-11873.39ABC transporter ATP-binding protein n=1 Tax=Deltap... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14560contigP-wetherbeei_contig14560:34..762 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog85643.Tmz1t_3131
PFAMsABC_tran
Model size729
Max annot lvl206389|Rhodocyclales
KEGG koko:K01996
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.42e-119
EggNOG OGsCOG0410@1|root,COG0410@2|Bacteria,1MVYI@1224|Proteobacteria,2VHGT@28216|Betaproteobacteria,2KZYM@206389|Rhodocyclales
DescriptionABC transporter
Cds size729
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186026.097787-CDS-P-wetherbeei_contig14560:33..7621683186026.097787-CDS-P-wetherbeei_contig14560:33..762Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14560 34..762 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14560.1.1prot_P-wetherbeei_contig14560.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14560 34..762 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14560.1.1

>prot_P-wetherbeei_contig14560.1.1 ID=prot_P-wetherbeei_contig14560.1.1|Name=mRNA_P-wetherbeei_contig14560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MSNGSINSLLIEARGLNTYYGASHILHGVDFSIRRGEAVGLMGRNGMGKS
TLLKTLLGLVRPRSGSVKVKGEDVTAAAPHRIAQAGIAYVPEGRGIFPNL
SVKENLVMAARAGTGGRRDWTYERVLETFPRVAERIHHGGAELSGGEQQM
LTIGRALMTNPDLLILDEATEGLAPLIAREIMRIVGLVRESGIATVIVDK
NFAAVNAITDRNVILVKGEVVYAGPADELRAKPDVHLRYLGV*
back to top

mRNA from alignment at P-wetherbeei_contig14560:34..762+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14560.1.1 ID=mRNA_P-wetherbeei_contig14560.1.1|Name=mRNA_P-wetherbeei_contig14560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig14560:34..762+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTAACGGTTCGATCAACAGCCTCCTGATCGAAGCGCGGGGCCTCAA CACCTACTACGGCGCGAGCCACATCCTGCACGGCGTCGACTTCTCGATCC GGCGCGGCGAGGCGGTCGGCCTGATGGGGCGCAACGGCATGGGCAAGAGC ACGCTGCTGAAGACGCTGCTCGGCCTGGTGCGCCCGCGCTCGGGCAGCGT GAAGGTCAAGGGCGAGGACGTCACCGCCGCCGCCCCGCACCGGATCGCGC AGGCGGGCATCGCCTACGTGCCCGAGGGGCGCGGCATCTTCCCGAACCTG TCGGTGAAGGAGAACCTCGTGATGGCGGCGCGGGCCGGCACCGGGGGCCG CCGCGACTGGACCTACGAGCGCGTGCTCGAGACCTTCCCGCGCGTCGCCG AGCGGATCCATCATGGCGGCGCGGAACTCTCCGGCGGCGAGCAGCAGATG CTGACGATCGGCCGCGCGCTGATGACGAACCCCGACCTCCTGATACTGGA CGAAGCCACCGAGGGCCTCGCGCCGCTGATCGCGCGCGAGATCATGCGCA TCGTCGGGCTGGTGCGCGAATCCGGCATCGCCACCGTGATCGTCGACAAG AATTTCGCCGCCGTGAACGCGATCACCGACCGCAACGTCATCCTGGTGAA GGGCGAGGTCGTCTACGCCGGGCCGGCGGACGAGTTGCGTGCGAAGCCCG ACGTGCACCTGCGCTACCTGGGCGTGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig14560:34..762+

>mRNA_P-wetherbeei_contig14560.1.1 ID=mRNA_P-wetherbeei_contig14560.1.1|Name=mRNA_P-wetherbeei_contig14560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig14560:34..762+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTAACGGTTCGATCAACAGCCTCCTGATCGAAGCGCGGGGCCTCAA
CACCTACTACGGCGCGAGCCACATCCTGCACGGCGTCGACTTCTCGATCC
GGCGCGGCGAGGCGGTCGGCCTGATGGGGCGCAACGGCATGGGCAAGAGC
ACGCTGCTGAAGACGCTGCTCGGCCTGGTGCGCCCGCGCTCGGGCAGCGT
GAAGGTCAAGGGCGAGGACGTCACCGCCGCCGCCCCGCACCGGATCGCGC
AGGCGGGCATCGCCTACGTGCCCGAGGGGCGCGGCATCTTCCCGAACCTG
TCGGTGAAGGAGAACCTCGTGATGGCGGCGCGGGCCGGCACCGGGGGCCG
CCGCGACTGGACCTACGAGCGCGTGCTCGAGACCTTCCCGCGCGTCGCCG
AGCGGATCCATCATGGCGGCGCGGAACTCTCCGGCGGCGAGCAGCAGATG
CTGACGATCGGCCGCGCGCTGATGACGAACCCCGACCTCCTGATACTGGA
CGAAGCCACCGAGGGCCTCGCGCCGCTGATCGCGCGCGAGATCATGCGCA
TCGTCGGGCTGGTGCGCGAATCCGGCATCGCCACCGTGATCGTCGACAAG
AATTTCGCCGCCGTGAACGCGATCACCGACCGCAACGTCATCCTGGTGAA
GGGCGAGGTCGTCTACGCCGGGCCGGCGGACGAGTTGCGTGCGAAGCCCG
ACGTGCACCTGCGCTACCTGGGCGTGTGA
back to top