mRNA_P-wetherbeei_contig14538.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: H6WBA7_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA7_VAULI) HSP 1 Score: 175 bits (444), Expect = 1.210e-50 Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 1
Query: 1 KSRRRGLHMRIQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVRLFCEYAKTFPYLLKQVLAVSKRDGEKD 468
+ +R G+ MR+Q R +++ DW DN+ NLP S++ + I HL FNT WA ++ H TP H DD H+STVP T MA ALSLLL+FR NAAYDRFWE+RKVWG++TNT RN ARL +T+ DEE + L+ +Y +++P+LLKQ L ++ D E D
Sbjct: 42 RGQRNGMSMRVQSARPFASNDWLDNIKNLPASKINKDITSHLWFNTGWAVLITCIHMFTPQHYIDDFHISTVPQTLMASALSLLLIFRNNAAYDRFWESRKVWGAITNTVRNLARLGKITI-DDEEVLSLYKDYLRSYPFLLKQHLQNTRNDEELD 196
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A836CJD6_9STRA (Bestrophin, RFP-TM, chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD6_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.360e-50 Identity = 85/148 (57.43%), Postives = 109/148 (73.65%), Query Frame = 1
Query: 19 LHMRIQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVRLFCEYAKTFPYLLKQVLAVSKRDGE 462
L R++ PR +S+ DW +NVINLPKSRLL I+ HL FNTAWAAAVS+ H +TP H FD + +T+PH+ MA AL LLLVFR+NA+YDRFWEARKVWG +TNT RN ARL+ M+ ++ + R EY K +P+LLKQ L ++ D E
Sbjct: 242 LVCRLRAPRAFSSEDWLENVINLPKSRLLLSIQSHLLFNTAWAAAVSVVHGMTPEHYFDHVGDTTMPHSIMASALGLLLVFRSNASYDRFWEARKVWGCITNTTRNLARLTQSCMSDEDTTYRAMLEYLKAYPWLLKQHLQDTRDDTE 389
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A6H5KGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP9_9PHAE) HSP 1 Score: 174 bits (442), Expect = 3.430e-49 Identity = 82/147 (55.78%), Postives = 104/147 (70.75%), Query Frame = 1
Query: 28 RIQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVRLFCEYAKTFPYLLKQVLAVSKRDGEKD 468
R++ PRRY + DW++N+ NLPKSRLL I+ HL +NTA+A VS+ H LTP H+ DDLHVS +PH+ M+GAL LLLVFRTNAAY+RFWEAR++WG + N RN ARLS V + D EY + FP+LLKQ L + D E D
Sbjct: 94 RVKTPRRYGSADWFENIRNLPKSRLLYNIKEHLLYNTAFAFFVSMIHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQIWGGLINQCRNIARLSTVALGPDSPEWLEMKEYLRLFPFLLKQHLQDERNDAEMD 240
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: D8LQQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ4_ECTSI) HSP 1 Score: 160 bits (404), Expect = 8.000e-46 Identity = 76/136 (55.88%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 61 DWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVRLFCEYAKTFPYLLKQVLAVSKRDGEKD 468
DW+ N+ NLPKSRLL I+ HL +NTA+A VS+ H LTP H+ DDLHVS +PH+ M+GAL LLLVFRTNAAY+RFWEAR++WG + N RN ARLS V + D EY + +P+LLKQ L + D E D
Sbjct: 8 DWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQIWGGLINQCRNIARLSTVALGPDSPEWLEMKEYLRLYPFLLKQHLQDERDDAEMD 143
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A7S2V5N3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N3_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.450e-33 Identity = 62/146 (42.47%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 4 SRRRGLHMRIQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVR-LFCEYAKTFPYLLKQVL 438
+R+ + M + P+RY+++DW N++++PKS +L+ ++ H+ +NTAWAA ++ + ++ D ++ +PH MA AL LLLVFRTNAAYDRFWEARKVWG+V NT+R+ R++ + + D+ ++R +C+ +P+LLKQ L
Sbjct: 48 ARKNSVMMAVPAPQRYTSQDWAKNLVSIPKSVVLQNVQSHVLWNTAWAAVITFLY-----NIGDLQALTPLPHQLMATALGLLLVFRTNAAYDRFWEARKVWGAVVNTSRDNVRVALIAI--DDPALRERYCQLGMLWPFLLKQHL 186
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: W7TTZ2_9STRA (Bestrophin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTZ2_9STRA) HSP 1 Score: 120 bits (302), Expect = 3.090e-29 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 31 IQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPS-HVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTM 363
+ P+RY + DW +N+ +L SR++++I GHL FNTAWA V+ + P H+ D +S VPH M+ AL LLLVFRTNAAYDRFWEARKVWGSVTN RN AR + +
Sbjct: 148 LDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSD--ISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIAL 257
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A0G4HYZ0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HYZ0_9ALVE) HSP 1 Score: 120 bits (300), Expect = 6.720e-29 Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 46 RYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVRLFCEYAKTFPYLLKQVL 438
RYS+ DW+ N+ ++PKS++ +I HL NTAWAAA++ H +P F D + T+PHT +A ALSLLLVFRTNA+YDR+WEARKVWG++ N +R A V A D R + P+++KQ L
Sbjct: 75 RYSSEDWFQNLASIPKSKIYRRISSHLVSNTAWAAAITALHDYSPVW-FQD--IPTLPHTVLASALSLLLVFRTNASYDRWWEARKVWGAIVNKSREMATF--VFSATDPSYHRTLGAFVCLSPFVMKQHL 200
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A7S2V524_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V524_9STRA) HSP 1 Score: 112 bits (281), Expect = 8.860e-27 Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 31 IQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTMAGDEESVR-LFCEYAKTFPYLLKQVL 438
+ P R++++DW N+ +P S +L+ I+ H +N+AWA ++ H+ + L+ +PH MA AL LLLVFRTN+AYDRFWEARKVWG+V NT R+ R+S + + D+ +R + FP+LLKQ L
Sbjct: 60 VPAPPRFTSQDWAQNLWTIPSSTILKNIQSHALWNSAWAVVITYMHS---QGIIGTLNA--MPHQLMATALGLLLVFRTNSAYDRFWEARKVWGAVVNTTRDVVRVSLIAI--DDPYLRDRMVQLTMIFPFLLKQHL 189
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A1X6NK24_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK24_PORUM) HSP 1 Score: 110 bits (274), Expect = 1.600e-25 Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 1
Query: 31 IQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAARLSAVTM 363
IQ P RYS+ DWW N+++LP+S +L +I H+AFNT A V H TP H+S +PH + AL LLL +RT+AAYDRFWEARKV G + N RN R++ ++
Sbjct: 90 IQRPERYSSADWWRNLVSLPQSVVLRRISSHVAFNTIVATLVVFLHQYTPDEKI--WHLSPLPHVLLGTALGLLLSYRTSAAYDRFWEARKVLGGMVNETRNIMRMAVTSL 198
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Match: A0A0G4HAB2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAB2_9ALVE) HSP 1 Score: 107 bits (266), Expect = 3.880e-24 Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 10 RRGLHMRIQVPR----RYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALTPSHVFDDLHVSTVPHTTMAGALSLLLVFRTNAAYDRFWEARKVWGSVTNTARNAA 342
R H+ P+ RYS+ DW +N++ +P+S + +I HLA NT WA ++ P +F D + T PH+ M+ AL+LLLVFRTNA+YDRFWEARKVWGS+ N +R A
Sbjct: 55 RSSAHVADDAPKSEKMRYSSEDWLENLVTIPQSNIYRRISKHLAANTIWAIFIAALDDFKPE-LFRD--IPTTPHSVMSSALALLLVFRTNASYDRFWEARKVWGSIVNKSREMA 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14538.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14538.1.1 >prot_P-wetherbeei_contig14538.1.1 ID=prot_P-wetherbeei_contig14538.1.1|Name=mRNA_P-wetherbeei_contig14538.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MRIQVPRRYSNRDWWDNVINLPKSRLLEKIRGHLAFNTAWAAAVSLAHALback to top mRNA from alignment at P-wetherbeei_contig14538:315..1545+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14538.1.1 ID=mRNA_P-wetherbeei_contig14538.1.1|Name=mRNA_P-wetherbeei_contig14538.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1231bp|location=Sequence derived from alignment at P-wetherbeei_contig14538:315..1545+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14538:315..1545+ >mRNA_P-wetherbeei_contig14538.1.1 ID=mRNA_P-wetherbeei_contig14538.1.1|Name=mRNA_P-wetherbeei_contig14538.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig14538:315..1545+ (Phaeothamnion wetherbeei SAG_119_79)back to top |