prot_P-wetherbeei_contig14534.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig14534.2.1
Unique Name	prot_P-wetherbeei_contig14534.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	146

Homology

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A258L5U8_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A258L5U8_9HYPH)

HSP 1 Score: 150 bits (378), Expect = 1.660e-43
Identity = 74/99 (74.75%), Postives = 85/99 (85.86%), Query Frame = 0

Query:   47 SLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            S+  G + SG+ SYYWQPQRVASGG FNPNAMTAAHKTLPFGT+VRVTN NNGR+V VTINDRGP++ GR+IDLS+AAA  VGMT SG+A VS+ VLGR
Sbjct:   71 SVAAGGSYSGMGSYYWQPQRVASGGWFNPNAMTAAHKTLPFGTKVRVTNRNNGRSVVVTINDRGPYIKGRIIDLSKAAAKQVGMTASGIAPVSVTVLGR 169

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A2S5MEG6_HYPSQ (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MEG6_HYPSQ)

HSP 1 Score: 145 bits (367), Expect = 9.250e-42
Identity = 72/101 (71.29%), Postives = 85/101 (84.16%), Query Frame = 0

Query:   45 LASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            +A  +GG+  SG ASYYWQPQRVASGG FNPNAMTAAHKTLPFGT+VRVTN NNGR+V VTINDRGP++ GR+IDLS+AAA  + M GSG+  VS+ V+GR
Sbjct:   75 VAYSSGGTTYSGKASYYWQPQRVASGGWFNPNAMTAAHKTLPFGTKVRVTNKNNGRSVVVTINDRGPYIKGRIIDLSKAAAHSISMQGSGVVPVSVTVIGR 175

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: UPI000931B055 (septal ring lytic transglycosylase RlpA family protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931B055)

HSP 1 Score: 145 bits (366), Expect = 1.130e-41
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0

Query:   47 SLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            + +G  A SGIASYYWQ Q+ ASG  FNP+AMTAAH+TLPFGT+VRVTN NNGR+VTVTINDRGPF+ GRVIDLS+ AA V+GM GSGLA VS+ VLGR
Sbjct:   72 AYSGSHAKSGIASYYWQGQKTASGARFNPSAMTAAHRTLPFGTKVRVTNRNNGRSVTVTINDRGPFIKGRVIDLSKGAAGVIGMQGSGLAPVSIEVLGR 170

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A7C2M2I1_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M2I1_9HYPH)

HSP 1 Score: 147 bits (372), Expect = 1.300e-41
Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 0

Query:   39 ARRGPALASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            AR   A  SL+   AG GIASYYWQPQRVA+GG F+PNAMTAAHKTLPFGT+VRVT++ NGR V V INDRGP+VAGR+IDLS+AAA+++GMT  G+ARV + VLGR
Sbjct:  143 ARAAWAKRSLSTSGAGHGIASYYWQPQRVAAGGWFDPNAMTAAHKTLPFGTKVRVTHLGNGRTVDVKINDRGPYVAGRIIDLSKAAAALLGMTQQGIARVKVEVLGR 249

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A6N6SU47_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SU47_9HYPH)

HSP 1 Score: 144 bits (364), Expect = 1.770e-40
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 0

Query:   51 GSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            GS   G+ASYYWQPQRVA+GG FNPNAMTAAHKTLPFGTRVRVT++ NGR+V V INDRGP+VAGR+IDLS+AAA V+GM   G+ARV + VLGR
Sbjct:  149 GSGQLGVASYYWQPQRVAAGGWFNPNAMTAAHKTLPFGTRVRVTHLGNGRSVEVKINDRGPYVAGRIIDLSKAAAGVLGMQSQGIARVQVTVLGR 243

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A1I7N001_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=2 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7N001_9HYPH)

HSP 1 Score: 142 bits (357), Expect = 2.000e-40
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 0

Query:   44 ALASLTGGSAGS-GIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            A     GGS GS G+ASYYWQ Q+ ASG  FNP  MTAAH+TLPFGTRVRVTN +NG++V VTINDRGPFV GRVIDLSR AA  + MTG+GLARVSL VLGR
Sbjct:   59 AARKSVGGSGGSHGVASYYWQGQKTASGARFNPEGMTAAHRTLPFGTRVRVTNQSNGQSVVVTINDRGPFVGGRVIDLSRGAARQINMTGAGLARVSLEVLGR 161

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: UPI00037EE49A (septal ring lytic transglycosylase RlpA family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00037EE49A)

HSP 1 Score: 142 bits (359), Expect = 2.270e-40
Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:   46 ASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            AS  GGS  +GIASYYWQ Q  ASG  FNP+AMTAAH+TLPFGTRV VTN +NGR+VTVTINDRGPF+ GR+IDLS+AAA  +GM G+GLARVS++VLGR
Sbjct:   92 ASYGGGS--TGIASYYWQGQMTASGARFNPSAMTAAHRTLPFGTRVLVTNQSNGRSVTVTINDRGPFIKGRIIDLSKAAAGAIGMQGAGLARVSISVLGR 189

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: V5SD29_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=2 Tax=Hyphomicrobium TaxID=81 RepID=V5SD29_9HYPH)

HSP 1 Score: 142 bits (359), Expect = 3.030e-40
Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 0

Query:   47 SLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            +L+ G    GIASYYWQPQ+VASGG FNPNA+TAAH++LPFGT+VRVTN  NG++V VTINDRGPF+ GR+IDLS+ AA V+GM G+GLA VS+ V+GR
Sbjct:  101 TLSSGGGSHGIASYYWQPQKVASGGYFNPNALTAAHRSLPFGTKVRVTNKRNGKSVVVTINDRGPFIKGRIIDLSKRAAGVIGMQGAGLAPVSVEVVGR 199

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: UPI0009FB8073 (septal ring lytic transglycosylase RlpA family protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI0009FB8073)

HSP 1 Score: 142 bits (359), Expect = 3.400e-40
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 0

Query:   56 GIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            G+ASYYWQPQRVASGG FNPNAMTAAHKTLPFGTRVRVT+  NGR+V V INDRGP+V GR+IDLS+AAA V+GM G G+A+V + VLGR
Sbjct:  115 GVASYYWQPQRVASGGWFNPNAMTAAHKTLPFGTRVRVTHAGNGRSVVVKINDRGPYVRGRIIDLSKAAAGVIGMHGQGIAQVRMEVLGR 204

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BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A7Y5CY75_HYPSQ (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CY75_HYPSQ)

HSP 1 Score: 140 bits (354), Expect = 7.890e-40
Identity = 70/102 (68.63%), Postives = 85/102 (83.33%), Query Frame = 0

Query:   44 ALASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 145
            A  S +GG   +G ASYYWQPQ +ASGG FNPNAMTAAHKTLPFGT+VRVTN NNG++V VTINDRGP++AGR+IDLS+AAA  + M GSG+  V++AVLG+
Sbjct:   71 ASQSNSGGYTLTGKASYYWQPQALASGGRFNPNAMTAAHKTLPFGTKVRVTNQNNGQSVVVTINDRGPYIAGRIIDLSKAAAHSINMQGSGVVPVTVAVLGK 172

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A258L5U8_9HYPH	1.660e-43	74.75	Endolytic peptidoglycan transglycosylase RlpA n=2 ...	[more]
A0A2S5MEG6_HYPSQ	9.250e-42	71.29	Endolytic peptidoglycan transglycosylase RlpA n=1 ...	[more]
UPI000931B055	1.130e-41	73.74	septal ring lytic transglycosylase RlpA family pro...	[more]
A0A7C2M2I1_9HYPH	1.300e-41	70.09	Endolytic peptidoglycan transglycosylase RlpA n=1 ...	[more]
A0A6N6SU47_9HYPH	1.770e-40	74.74	Endolytic peptidoglycan transglycosylase RlpA n=1 ...	[more]
A0A1I7N001_9HYPH	2.000e-40	71.84	Endolytic peptidoglycan transglycosylase RlpA n=2 ...	[more]
UPI00037EE49A	2.270e-40	73.00	septal ring lytic transglycosylase RlpA family pro...	[more]
V5SD29_9HYPH	3.030e-40	68.69	Endolytic peptidoglycan transglycosylase RlpA n=2 ...	[more]
UPI0009FB8073	3.400e-40	76.67	septal ring lytic transglycosylase RlpA family pro...	[more]
A0A7Y5CY75_HYPSQ	7.890e-40	68.63	Endolytic peptidoglycan transglycosylase RlpA n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 54..144 e-value: 2.1E-33 score: 116.1
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 56..139
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 55..139 e-value: 2.2E-24 score: 85.6
IPR012997	Rare lipoprotein A	TIGRFAM	TIGR00413	TIGR00413	coord: 56..144 e-value: 2.1E-34 score: 117.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR34183	FAMILY NOT NAMED	coord: 17..144
IPR034718	Endolytic peptidoglycan transglycosylase RlpA	HAMAP	MF_02071	RlpA	coord: 8..143 score: 21.182144

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig14534	contig	P-wetherbeei_contig14534:551..988 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig14534.2.1	mRNA_P-wetherbeei_contig14534.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig14534 551..988 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig14534.2.1 ID=prot_P-wetherbeei_contig14534.2.1|Name=mRNA_P-wetherbeei_contig14534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp
GSDRVAPSSRAERRSTRNTRVTRERTVRSAEARQSRRGARRGPALASLTG
GSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGR
AVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036908	RlpA-like_sf
IPR009009	RlpA-like_DPBB
IPR012997	RplA
IPR034718	RlpA