mRNA_P-wetherbeei_contig14406.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: D7G036_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G036_ECTSI) HSP 1 Score: 118 bits (295), Expect = 1.060e-32 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 EKMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCP 267
+K+ APP+F PV+DRKCTDI+F+L II MW+ MT +GI ++ GD L+AP DYEGN+CG GYED LYY + G GVC +SCP
Sbjct: 3 DKLTAPPEFDGPVRDRKCTDIIFTLAIIIMWITMTVVGISSVQQGDVRELLAPTDYEGNLCGFDDGYEDRGKLYYANNVGSGVCEKSCP 91
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.410e-31 Identity = 56/95 (58.95%), Postives = 70/95 (73.68%), Query Frame = 1
Query: 1 EKMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCPTTTDLT 285
+K+ A P+F PV++RKCTDI+F L II MW+ MTA+GI I+ GD L+AP DYEGN+CG GYEDL LYY + G GVCV +CP+TTDLT
Sbjct: 6 DKLTASPEFDGPVRERKCTDIIFMLAIIIMWITMTAVGISSIQQGDVRELLAPTDYEGNLCGFDDGYEDLGKLYYANNVGSGVCVGTCPSTTDLT 100
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A7S4J5U8_9STRA (Choline transporter-like protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5U8_9STRA) HSP 1 Score: 109 bits (272), Expect = 9.010e-26 Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 1 EKMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDN---LYYISTSGYGVCVESCPTTTDLT 285
EK+ APPDF PVQ+R+CTD+L SLL++ W AMT LG + NGD +++ P+DY+GNICG G D+++ LYY+++ GVCV+ CP+ DLT
Sbjct: 9 EKLQAPPDFSGPVQNRRCTDVLCSLLLVLTWAAMTGLGFYAVSNGDYRVIVYPMDYDGNICGTNYGNIDMEDYPFLYYVNSYSAGVCVKECPSIEDLT 106
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.460e-24 Identity = 49/92 (53.26%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 4 KMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCPTTTD 279
K+ AP D + DR+CTD+LF L++I W+AMT LG+DGI NG+P LL+ +DY+G ICG G +D LYYI G GVCVE CPT T+
Sbjct: 17 KLAAPDDIEGGA-DRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTN 107
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A7S2XXR1_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR1_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.880e-24 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 4 KMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCP 267
K ++ F+ P RKCTDILF +LII W+ +TA+G D +GDP+ LIA VDY G +CG++SG ED +N+YY+ +S GVCV +CP
Sbjct: 18 KKLSGDGFQGPTDQRKCTDILFLILIILAWIILTAIGSDSCVHGDPWTLIAQVDYGGRVCGYSSGVEDSENIYYLDSSLNGVCVNTCP 105
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE) HSP 1 Score: 103 bits (258), Expect = 7.080e-24 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 7 MVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCPTTTD 279
M PD DR+CTD+LF L++I W+AMT LG+DGI NG+P LL+ +DY+G ICG G +D LYYI G GVCVE CPT T+
Sbjct: 1 MPTAPDDIEGGADRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTN 91
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A7S2HA85_9STRA (Choline transporter-like protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HA85_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.020e-22 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 1 EKMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDN---LYYISTSGYGVCVESCP 267
EK+VAP DF P +DR CTDI S+L++CMW+AMT LG NGD +++ P+DY+GNICG G D+++ L Y++ GVCV+ CP
Sbjct: 18 EKLVAPADFDGPTKDRHCTDIFCSILLLCMWIAMTGLGAYAATNGDFRVILYPLDYDGNICGTDYGSIDMNDYPYLVYVNIFSGGVCVKECP 109
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A7S2UXN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXN4_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.850e-22 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 43 DRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCPTTTDL 282
DRKCTD+L L+++C W MT LG + +E G P LI DY+G CG+ SG +D LYYI +SG GVC++ CP TDL
Sbjct: 1 DRKCTDVLMLLVLLCCWGVMTYLGWEALERGKPEFLIYQPDYKGRACGYDSGVKDKPLLYYIDSSGTGVCLDKCPEETDL 80
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A7S3Y2F1_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2F1_HETAK) HSP 1 Score: 98.6 bits (244), Expect = 5.410e-22 Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 1 EKMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDNLYYISTSGYGVCVESCPTTTD 279
E + A DF PV++R+CTD+L+ L++ +W+ MT +G ++NGD L++ PVDY+G CG YED +LYY+ G GVCVESCP TTD
Sbjct: 10 EPIQAGHDFDGPVKNRRCTDLLWLGLLLVVWICMTVIGKQAVDNGDIDLILHPVDYQGRSCG-VGDYEDKPDLYYVRFDGTGVCVESCPQTTD 101
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Match: A0A7S2UHE9_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHE9_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.330e-20 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 1 EKMVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAPVDYEGNICGHTSGYEDLDN---LYYISTSGYGVCVESCP 267
+K+ AP DF P DR CTDI+ S+LI+ MW+AM+ +G + NGD ++ P+DY+GNICG G D+ LYY+++ GVCV+ CP
Sbjct: 14 DKLEAPADFDGPTDDRHCTDIVCSILIVIMWIAMSGVGAYAVTNGDYRKILNPLDYDGNICGTDFGGVDMTEYPYLYYVNSYSGGVCVKECP 105 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14406.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14406.1.1 >prot_P-wetherbeei_contig14406.1.1 ID=prot_P-wetherbeei_contig14406.1.1|Name=mRNA_P-wetherbeei_contig14406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp MVAPPDFKRPVQDRKCTDILFSLLIICMWVAMTALGIDGIENGDPYLLIAback to top mRNA from alignment at P-wetherbeei_contig14406:2..1084+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14406.1.1 ID=mRNA_P-wetherbeei_contig14406.1.1|Name=mRNA_P-wetherbeei_contig14406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1083bp|location=Sequence derived from alignment at P-wetherbeei_contig14406:2..1084+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14406:2..1084+ >mRNA_P-wetherbeei_contig14406.1.1 ID=mRNA_P-wetherbeei_contig14406.1.1|Name=mRNA_P-wetherbeei_contig14406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig14406:2..1084+ (Phaeothamnion wetherbeei SAG_119_79)back to top |