prot_P-wetherbeei_contig1435.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1435.2.1
Unique Nameprot_P-wetherbeei_contig1435.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length499
Homology
BLAST of mRNA_P-wetherbeei_contig1435.2.1 vs. uniprot
Match: UPI001EEC39DC (LOW QUALITY PROTEIN: protein SSUH2 homolog n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEC39DC)

HSP 1 Score: 68.9 bits (167), Expect = 6.020e-9
Identity = 55/179 (30.73%), Postives = 80/179 (44.69%), Query Frame = 0
Query:   11 APPAGYLPMIKGYELLKLGEAW------IPSAPQSERESRVLKPPLSIALDASIDDLTVKEAEEALEMYVGGNWCYGTAPLRDLQVLSTRSSQAFHVNLDTYVERRKFEFAVRPHKQHGVSAASAAAAAPIPTPDYSGVAAPWAVAAEMPALFEDGQVGPADVPGTLTVKDCFHCDGGG 183
            APPAG+   + GYE    G         +PSAP    E+   +P      + +I  ++ + A EA   Y+    CY +AP+++  +        +   L+T+ E R  E+   P+    V A +       P P      APWAVAA+ PA F+D Q     VP T +VK C  C G G
Sbjct:   33 APPAGFYDSVPGYEGTLAGGGGGFLPPPMPSAPLPAPENLPAQP------NWNITSISEEVAREAFASYISSKCCYSSAPVKEGVITGLDPFNTYRYRLETFAETRSTEWNQEPYTGQHVDAFTQ------PAP------APWAVAAQPPAFFQD-QTQTLRVPYTSSVKPCHACMGMG 192          
BLAST of mRNA_P-wetherbeei_contig1435.2.1 vs. uniprot
Match: A0A6A4VZH7_AMPAM (Protein SSUH2 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VZH7_AMPAM)

HSP 1 Score: 67.0 bits (162), Expect = 3.070e-8
Identity = 39/129 (30.23%), Postives = 65/129 (50.39%), Query Frame = 0
Query:   59 DDLTVKEAEEALEMYVGGNWCYGTAPLRDLQVLSTRSSQAFHVNLDTYVERRKFEFAVRPHKQHGVSAASAAAAAPIPTPDYSGVAAPWAVAAEMPALFEDGQVGPADVPGTLTVKDCFHCDGGGQLRC 187
            D LT  E ++AL  +V  + CYG+AP++D+Q+ +   +  F   L+++VE+R+ ++   P   +G+ A         P P       PW +     ALF+D +     VP T T++ C  C   G +RC
Sbjct:  129 DPLTRDEVKDALAAFVAQHCCYGSAPIKDMQIRNVAPTFTFKYTLESFVEKRETKWKFEPFSGNGLPAGGG------PAPQ------PWEIPLTPGALFKDEKK-VLQVPNTQTLRPCHDCQAHGDVRC 244          
BLAST of mRNA_P-wetherbeei_contig1435.2.1 vs. uniprot
Match: UPI001884F330 (protein SSUH2 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F330)

HSP 1 Score: 63.5 bits (153), Expect = 3.830e-7
Identity = 50/176 (28.41%), Postives = 80/176 (45.45%), Query Frame = 0
Query:   11 APPAGYLPMIKGYELLKLGEAWIPSAPQSERESRVLKPPLSIALDASIDDLTVKEAEEALEMYVGGNWCYGTAPLRDLQVLSTRSSQAFHVNLDTYVERRKFEFAVRPHKQHGVSAASAAAAAPIPTPDYSGVAAPWAVAAEMPALFEDGQVGPADVPGTLTVKDCFHCDGGGQLR 186
            APPAG    ++GY        ++  AP S R      PP    +D     L+  E +EAL  +V  + CYG+ P++D+++ S   S  F   LDT+ E+R+ ++   P K  G S A++ A  P           PW +      LF+  +    +VP + +++ C  C   G  R
Sbjct:   75 APPAGSFEKVEGYRDTGFNGGFV--APPS-RAVPTAPPPDLPRMDVVQQPLSRGEVKEALAAFVAQHCCYGSGPIKDMEIRSVVPSATFKYTLDTFTEKRETKWKFEPWK--GDSLATSGAPPP----------GPWDMPITPKHLFQK-ETRTLEVPNSQSLRPCHDCQAHGDKR 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1435.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001EEC39DC6.020e-930.73LOW QUALITY PROTEIN: protein SSUH2 homolog n=1 Tax... [more]
A0A6A4VZH7_AMPAM3.070e-830.23Protein SSUH2 n=2 Tax=Amphibalanus amphitrite TaxI... [more]
UPI001884F3303.830e-728.41protein SSUH2 homolog n=1 Tax=Pollicipes pollicipe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..381
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 58..235
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 424..487
coord: 230..285
IPR033271Protein SSUH2 homologuePANTHERPTHR15852:SF49PROTEIN SSUH2 HOMOLOGcoord: 424..487
coord: 230..285
IPR033271Protein SSUH2 homologuePANTHERPTHR15852:SF49PROTEIN SSUH2 HOMOLOGcoord: 58..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1435contigP-wetherbeei_contig1435:1863..5263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1435.2.1mRNA_P-wetherbeei_contig1435.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1435 1261..5307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1435.2.1 ID=prot_P-wetherbeei_contig1435.2.1|Name=mRNA_P-wetherbeei_contig1435.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=499bp
MSMSQKGIIVAPPAGYLPMIKGYELLKLGEAWIPSAPQSERESRVLKPPL
SIALDASIDDLTVKEAEEALEMYVGGNWCYGTAPLRDLQVLSTRSSQAFH
VNLDTYVERRKFEFAVRPHKQHGVSAASAAAAAPIPTPDYSGVAAPWAVA
AEMPALFEDGQVGPADVPGTLTVKDCFHCDGGGQLRCGQCEGAGINVCAA
CRGAKKKVCDPCKGKGYAYRSNAPNVADDCRACRGLGFQHCAPCKGRGDL
PCVPCSGRGDFACAACKGHGLLEIAVAMTVTWRTEHVSRVTGQPLPQSLL
PAAAPRPPRRRPNSLSSPTSSATGSSASISSAASAAPGGAAAAVVGGRGA
SGGSAPAKRGSPSGAAVARASSASASGAGRMQQSAVGAVPPELLKHERGE
LIAEAPRGPLVPPLTSPSFPAFVAELSAEMVAASHAAAGRIVIQAHNISR
VPLWQVTAKFTMDNKKFIYFVYGDQHLVYETDYPSPYCCGLGYSCVVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033271SSUH2