mRNA_P-wetherbeei_contig14313.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A7C2QPN7_9HYPH (DUF559 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QPN7_9HYPH) HSP 1 Score: 147 bits (371), Expect = 1.590e-43 Identity = 69/115 (60.00%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFI 345
MRG QPW+T+R+R LRS+ A K+WS LRNRRL+GLKFVR+ +G ++ADF+CR+ KV+VE+DGG HST EIA D R L A G+R+FR N ++YDNIDGV DTLL FI
Sbjct: 1 MRGSQPWQTSRSRALRSKPISAEAKLWSRLRNRRLNGLKFVRQVPLGSYFADFLCREHKVVVEVDGGTHSTQAEIAADGRRARELRAMGYRVFRVRNIDIYDNIDGVLDTLLDFI 115
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: UPI000930D207 (DUF559 domain-containing protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI000930D207) HSP 1 Score: 144 bits (363), Expect = 2.550e-42 Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFIRRK 354
MRG +PWRTNRARVLR+ + A ++W+ELR+RRL GLKFVR+ I Y DF+CR++KVIVE+DGG HSTD EIA D AR L G+R+FR N +VYD++D D LLA+++ K
Sbjct: 1 MRGARPWRTNRARVLRADDTSAEARLWNELRDRRLGGLKFVRQAPIADHYVDFLCREQKVIVEVDGGTHSTDAEIANDAARADQLRQLGYRLFRVSNADVYDDLDSALDALLAYVKEK 118
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A6I0ELI1_HYPSQ (Endonuclease domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0ELI1_HYPSQ) HSP 1 Score: 139 bits (351), Expect = 1.600e-40 Identity = 66/117 (56.41%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFIRR 351
MRGPQPWRTNR+R LRSR A K+W ELR+RRL G KFVR+ IGP++ADF CR++K+IVE+DG H DEEIA D+AR A L G+R+ R N +V N+DGV + LL +++
Sbjct: 1 MRGPQPWRTNRSRALRSRQVTAEAKLWEELRSRRLGGFKFVRQAAIGPYFADFACREKKLIVEVDGATHGLDEEIAADQARTAALERMGYRVCRVTNDDVERNMDGVLEWLLHELQK 117
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: UPI001FA9FF12 (endonuclease domain-containing protein n=1 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=UPI001FA9FF12) HSP 1 Score: 136 bits (342), Expect = 3.640e-39 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFIR 348
MRG RT+R+R LR + A K+WS LR R+L G KFVR+ IGPF+ADFVCRD+K+++E+DG HSTDEE YD+ REA+L G+R+ R N +V+ N+DGVC+T+LA ++
Sbjct: 1 MRGAAALRTSRSRALRGEQTDAERKLWSALRGRQLGGFKFVRQEPIGPFFADFVCRDQKLVIEVDGATHSTDEERDYDRRREAFLREAGYRVVRVTNDDVFRNLDGVCETILAALQ 116
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A679JCP3_9HYPH (DUF559 domain-containing protein n=1 Tax=Hyphomicrobium sp. ghe19 TaxID=2682968 RepID=A0A679JCP3_9HYPH) HSP 1 Score: 134 bits (336), Expect = 2.800e-38 Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLA 339
MRG QPW+ NRARVLRS A+ A +K+W LR+RRL G+KFVR+ I +Y DF CRD + IVEIDGG H T E+A+D R L+A G+++ R HN ++ +N+DGV D +LA
Sbjct: 1 MRGTQPWKANRARVLRSNATAAKDKLWFHLRDRRLGGVKFVRQFPIENYYVDFACRDARSIVEIDGGTHDTPSELAHDSKRTQTLMALGYKVVRVHNNDICENVDGVLDQILA 113
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: UPI0019B5FA89 (Endonuclease domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019B5FA89) HSP 1 Score: 134 bits (336), Expect = 3.260e-38 Identity = 64/117 (54.70%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFIRR 351
MRGPQPWRTNR+R LRSR A EK+W ELRNRRL G KFVR+ +G ++ DF CR+ K+IVE+DG H D EIA D R + L G+R+ R N +V NIDGV + LL + R
Sbjct: 1 MRGPQPWRTNRSRALRSRQVSAEEKLWEELRNRRLSGFKFVRQLPVGSYFGDFACRERKLIVEVDGATHGRDVEIASDAVRTSSLEGMGYRVCRVTNDDVTRNIDGVLEWLLHELER 117
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A549SHI6_METSR (DUF559 domain-containing protein n=2 Tax=Methylosinus TaxID=425 RepID=A0A549SHI6_METSR) HSP 1 Score: 128 bits (321), Expect = 6.610e-36 Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFIRRK 354
MRG + T R+R LR+ +PA E++W LR RRL G KFVR+ IGP++ADF CRDE ++VE+DG HSTD EIA D R+ +L A GFR+ R N EV+ N+DGV +T+L + R+
Sbjct: 1 MRGLRLHETARSRELRAAQTPAEERLWGALRARRLAGYKFVRQLPIGPYFADFACRDEALVVEVDGATHSTDAEIARDAHRDRFLRAAGFRVLRVANDEVFHNLDGVKETILTALERR 118
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A3S0M6W3_9HYPH (Endonuclease domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0M6W3_9HYPH) HSP 1 Score: 127 bits (319), Expect = 1.910e-35 Identity = 61/118 (51.69%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFIRRK 354
MR QPWRT R+RVLRS+ A +W LRNR+L G KFVR+ IGP++ADF CR+ ++IVE+DGG HS +E A D R L GFR+ R N +VY NI+GV DT+LA + +
Sbjct: 1 MRSAQPWRTTRSRVLRSKPISAEAALWRRLRNRQLGGFKFVRQFPIGPYFADFTCRELRLIVELDGGTHSEAQERASDAERSRVLNTAGFRVVRVRNADVYGNIEGVLDTILAELVKS 118
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A6B8MBD4_9HYPH (Endonuclease domain-containing protein n=1 Tax=Methylocystis parvus TaxID=134 RepID=A0A6B8MBD4_9HYPH) HSP 1 Score: 125 bits (315), Expect = 5.560e-35 Identity = 59/115 (51.30%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLLAFI 345
MRGP + R+R LR+ + A +W +LR RRL G KFVR+ I F+ADFVCR++K+++E+DG HSTDEE+AYD RE L A GFRI R N ++ NIDGVC+T+L +
Sbjct: 1 MRGPDHFERTRSRDLRAAQTSAEANLWGKLRGRRLGGYKFVRQEPIEGFFADFVCREQKLVIEVDGATHSTDEEVAYDARRERILKAAGFRILRVQNDDIRTNIDGVCETILRTL 115
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Match: A0A212QYQ9_RHOAC (Very-short-patch-repair endonuclease n=2 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=A0A212QYQ9_RHOAC) HSP 1 Score: 126 bits (317), Expect = 6.920e-35 Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYADFVCRDEKVIVEIDGGAHSTDEEIAYDKAREAYLLAQGFRIFRAHNGEVYDNIDGVCDTLL 336
MRG P RT+R+R+LR A+ A K+WS LR RRL+G KFVR+ IG +Y DFVCR+ K+IVE+DG HST E A+D R+ +L+ QGFR+ R N V++NI GVC+T+L
Sbjct: 1 MRGATPTRTDRSRLLRRDATSAEAKLWSRLRARRLNGFKFVRQENIGVYYVDFVCREAKLIVEVDGATHSTPRERAHDHRRDMWLVEQGFRVLRVTNAYVFENIAGVCETIL 112 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14313.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14313.1.1 >prot_P-wetherbeei_contig14313.1.1 ID=prot_P-wetherbeei_contig14313.1.1|Name=mRNA_P-wetherbeei_contig14313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MRGPQPWRTNRARVLRSRASPAYEKMWSELRNRRLDGLKFVRECVIGPFYback to top mRNA from alignment at P-wetherbeei_contig14313:1284..1646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14313.1.1 ID=mRNA_P-wetherbeei_contig14313.1.1|Name=mRNA_P-wetherbeei_contig14313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig14313:1284..1646+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14313:1284..1646+ >mRNA_P-wetherbeei_contig14313.1.1 ID=mRNA_P-wetherbeei_contig14313.1.1|Name=mRNA_P-wetherbeei_contig14313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig14313:1284..1646+ (Phaeothamnion wetherbeei SAG_119_79)back to top |