mRNA_P-wetherbeei_contig14248.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14248.1.1 vs. uniprot
Match: A0A7X8XPJ9_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XPJ9_9BURK) HSP 1 Score: 216 bits (549), Expect = 7.100e-59 Identity = 170/547 (31.08%), Postives = 275/547 (50.27%), Query Frame = 1
Query: 1 LFRQIQLEQRAQVEALQGLGQSPTKSMLT---RHITSLRSASERLLELFPLLQKEESKEQMYSPFPVIDHTIRVGINLLDGKVSDSDFQTRLPSVGALISSLRQDVERFRLLYGKAELVAQTGPILERLEAGLGAAYTYVGNQDKIALQDSLRLLGSAGVQLMEVLQKFDEAGKNEVRFHQLR-FLEEFARAAQLENPPEWMVGRIWMGLDQALEYYKREMTTILRHPVFFEIETAFQPVDATLKRTLALYAAANKGKIAKDSLILLAPAVEQLDAEFKALQQQ--HQA-----AAFRYREAPNLDAVRELIGRTLNGEVGAAQFVRQLAEVQEAHQEMLKGL--EAGGSDPLTDELLH--LSRSHALAYARMNLYAEDGDPDHLRQGWLLISVSLPRIMELSKQLRERI-GVKPTSTVAFGVTCFRCGSENPKGQKFCKKCNAMLPQTSQEATEYTDIIGGAPSVAAPPSGTPANVAKLAQLVQQIEGGQIGISKFQSEMDEQLRNADKVHQGFDRQVANMTGRNPSFDAYAQFFATQMESYIQGL 1593
L R +LE AQ ALQ L + +S R + LR A++RL E L+ EE + ++SP P +DH +++G N+LDG V+ Q P V + ++ R VERF L + ++EL A PIL+ LEAG+GAA ++ + L+D LRL+ A ++L +LQ+ EA N+ R + +EE ARA ++ P E ++ R+W L LE + T+ HP+ + P A + L+ AA + S L +E LD +L+++ QA A + AP L + L+GR + G++ + + Q Q + L AG DP +E L L+R + + L+ + ++L + W +++ + PR++ LS+ LR R+ V P T C RCG+ N ++C C+A+LP ++Q TE+++I G P PA+V +L LV+++E Q ++ Q E+++ L A++V F QV +P+ YA+FF QME Y+ GL
Sbjct: 62 LLRSARLEAEAQWRALQALESALAESRKVGAQRALEDLRLATDRLQEALRSLRSEEQEADLFSPDPELDHFLKIGRNVLDGHVAAQALQADFPGVASRVTRKRAAVERFALFHTESELGAAAEPILQNLEAGMGAAAEFLQGGRRETLEDCLRLVAPASIELQPLLQEM-EAWANQHRCYAAHPLVEELARAREVVLPEE-LLERLWEDLTVLLEDEAARIQTLRLHPL--RVLAGLDPEPAAV-----LHLAAQQALSQSRSTGLTDAPLEALDEALTSLRKELAQQAELLGQATAPVQGAPFLVEFQALLGRAMQGQLPREELHSAVEHFQALQQGLADELAQSAGLVDPEEEEALQELLTRQGEVG-TLLELWCQGAQEENLVEAWAILAETTPRLVALSESLRRRLQNVNPAPTDPI---CLRCGTANSPSSRYCGACSAVLPISAQGPTEFSEITGADE----PAPAAPAHVVRLEDLVRRVEEEQARPAEVQEEVEDLLARAEQVAANFHGQVRPRLLADPTLVEYARFFEEQMEVYMGGL 591
BLAST of mRNA_P-wetherbeei_contig14248.1.1 vs. uniprot
Match: A0A7X8XNJ9_9BURK (Zinc ribbon domain-containing protein (Fragment) n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XNJ9_9BURK) HSP 1 Score: 211 bits (537), Expect = 3.160e-57 Identity = 147/449 (32.74%), Postives = 226/449 (50.33%), Query Frame = 1
Query: 103 LRSASERLLELFPLLQKEESKEQMYSPFPVIDHTIRVGINLLDGKVSDSDFQTRLPSVGALISSLRQDVERFRLLYGKAELVAQTGPILERLEAGLGAAYTYVGNQDKIALQDSLRLLGSAGVQLMEVLQKFDEAGKNEVRFHQLRFLEEFARA--AQLENPPEWMVGR-IWMGLDQALEYYKREMTTILRHPVFFEIETAFQPVDATLKRT---LALYAAANKGKIAKDSLILLAPAVEQLDAEFKALQQQHQAAAFRYREAPNLDAVRELIGRTLNGEVGAAQFVRQLAEVQEAHQEMLKGLEAGGSDP-LTDELLHLSRSHALAYARMNLYAEDGDPDHLRQGWLLISVSLPRIMELSKQLRERIGVKPTSTVAFGVTCFRCGSENPKGQKFCKKCNAMLPQTSQEATEYTDIIGGAPSVAAPPSGTPANVAKLAQLVQQIEGGQI 1428
LR A+ RL + LL +EE KE++YSPFP ++H ++VG+N+L+G V ++ R P V AL+ L +D +RF LYG E+ +LE ++AGLGA Y + + AL D L+LLG E+L + D R +L+E RA E WM+ R W A +Y++E+ R P++ ++ P A L + L L A + D L L PA ++L ++ L + + RY EAP +RE +GR L+GE +Q + E QE+L L GG + L EL L A+ + E D LR+GW L+ ++PR++E+++ +R+ + K G+ C RCG NP G ++C C+A+LP+ Q TEYTDI+GG S T ++ + +L+ E GQ+
Sbjct: 99 LREAASRLARGYGLLHEEEKKEKIYSPFPAVEHFLKVGLNVLEGHVGRAELTERFPPVVALVGRLERDHQRFEALYGAEEVALPMVGLLEAMQAGLGAIAEYFESGSRSALADGLKLLGRGSAAAHELLPEMDRVAAATRRSGHA-YLDELRRALDCHAEGRLPWMLVRDAWXXXXXAESHYRQELDAFRRFPLYPFMKDDELPARAALDQVQVELELLEPAFDRESTPD-LAGLEPAFDELASQVAHLWDRIEEELGRYSEAPAFQELRERVGRALSGEPVDLLLRQQFSSFHETQQELLNQLAQGGLEGGLGSELGALLAVQDQAWQVLLSSLEGPDLAVLRRGWELLEATMPRMVEIARGMRQVLQ-KSRPAAPTGMACMRCGHANPPGVRYCGACSAVLPEVFQAPTEYTDILGGGASE------TGTRLSNMERLLTAYEVGQV 538
BLAST of mRNA_P-wetherbeei_contig14248.1.1 vs. uniprot
Match: A0A355TQP5_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TQP5_9BACT) HSP 1 Score: 170 bits (431), Expect = 2.430e-42 Identity = 144/548 (26.28%), Postives = 246/548 (44.89%), Query Frame = 1
Query: 1 LFRQIQLEQRAQVEALQGLGQSPTKS---MLTRHITSLRSASERLLELFPLLQKEESKEQMYSPFPVIDHTIRVGINLLDGKVSDSDFQTRLPSVGALISSLRQDVERFRLLYGKAELVAQTGPILERLEAGLGAAYTYVGNQDKIALQDSLRLLGSAGVQLMEVLQKFDEAGKNEVRFHQLRFLEEFARAAQLENPPEWMVGRIWMGLDQALEYYKREMTTILRHPVFFEIETAFQPVDATLKRTLALYAAANKGKIAKDSLILLAPAVEQLDAEFKALQQQHQAAAFRYREAPNLDAVRELIGRTLNGEVGAAQFVRQLAEVQEAHQEMLKGLEAGGSDPLTDE----LLHLSRSHALAYARMNLYAEDGDPDHLRQGWLLISVSLPRIMELSKQLRERIGVKPTSTVAFGVTCFRCGSENPKGQKFCKKCNAMLPQTSQEAT-EYTDIIGGAPSVAAPPSGTPANVAKLAQLVQQIEGGQIGISKFQSEMDEQLRNADKVHQGFDRQVANMTGRNPSFDAYAQFFATQMESYIQGLYLMHSYAEN 1620
L ++Q E A +ALQ L S + + + + L+ ++E + L+ L E ++ + SP+PV DH ++VG N+L G V S LR V+RF L YG++ L ++ +EAG+GA ++ + AL D+L LL + V + V+ + E ++ + +EE RA + + E + +W + AL+ ++ T+L HP+ + Q + A + R + + K + + L + LD APN + + +G ++G++ F L + E +E L+ G + L+ E L H AL + + E GD L+ GW IS SLP + Q+++ +G+ S+ +TC RCG +NP ++C KC+A+L Q Q EYTD+ G S + P N+ KL QLV+ +E GQ + +D+ L +A + + +V R + A+ F M SYI GL + ++ E+
Sbjct: 62 LVNKLQAELEAHEKALQDLENSLSDAEPFAIEKAGRDLKYSAEAVATLWDELNAEVGEQMVMSPYPVYDHLLKVGQNILQGHVDPSVLTAFFTPAADFTIRLRAAVKRFVLFYGESSLSECAQKVITNVEAGMGALDKFLQSGQTKALDDALHLLVTTTVTMYTVMSDMGQWAAAEKKYARHPLVEELYRAREAKLQGEDL-SYLWQAIKHALKLELTQVQTLLNHPLASLCDVHSQALKAGMARVMYIVQEGEKKSLDELDLPEFDIMLLNLDRLIHNDLTHINIECRLVSGAPNFEELLVTVGLAMDGKIEPEAFKIILQDTLERIEETQNNLD-GALEQLSAEDLELLAHCLDCQALGCRELASWCETGDKQLLKNGWRRISASLPSTKRICAQMKKSLGLNDNSSKK--LTCMRCGQQNPASARYCSKCSAVLMQLVQAPPMEYTDLETGL-SDSNFEHPLPGNILKLEQLVRSVESGQAYTQEAAEVLDKLLSSAYAYRKLYINRVRPALEREQIDPSIAERFEIGMSSYIDGLEICRNFVED 604 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14248.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14248.1.1 >prot_P-wetherbeei_contig14248.1.1 ID=prot_P-wetherbeei_contig14248.1.1|Name=mRNA_P-wetherbeei_contig14248.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=540bp LFRQIQLEQRAQVEALQGLGQSPTKSMLTRHITSLRSASERLLELFPLLQback to top mRNA from alignment at P-wetherbeei_contig14248:91..1710+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14248.1.1 ID=mRNA_P-wetherbeei_contig14248.1.1|Name=mRNA_P-wetherbeei_contig14248.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1620bp|location=Sequence derived from alignment at P-wetherbeei_contig14248:91..1710+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14248:91..1710+ >mRNA_P-wetherbeei_contig14248.1.1 ID=mRNA_P-wetherbeei_contig14248.1.1|Name=mRNA_P-wetherbeei_contig14248.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1620bp|location=Sequence derived from alignment at P-wetherbeei_contig14248:91..1710+ (Phaeothamnion wetherbeei SAG_119_79)back to top |