mRNA_P-wetherbeei_contig10346.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A7S2V865_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V865_9STRA) HSP 1 Score: 249 bits (637), Expect = 5.520e-80 Identity = 122/139 (87.77%), Postives = 135/139 (97.12%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFEAPRHGSLGFLPKKRT+ HHG+IR+FP+DDASKPPHLTAFMAYKAGMTHI REV+RPGSK+HKKEVVEAVTI+EAPPM+VVG+VGYVETP GLR+LTTVWAEHLSEE KRRFYKNWYKSK+KAFT+YAKKYT+ Sbjct: 1 MSHRKFEAPRHGSLGFLPKKRTKHHHGRIRTFPKDDASKPPHLTAFMAYKAGMTHIVREVERPGSKLHKKEVVEAVTIMEAPPMMVVGLVGYVETPRGLRSLTTVWAEHLSEECKRRFYKNWYKSKRKAFTKYAKKYTD 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: W7T3X6_9STRA (60s ribosomal protein l3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3X6_9STRA) HSP 1 Score: 241 bits (615), Expect = 1.550e-79 Identity = 118/139 (84.89%), Postives = 131/139 (94.24%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKF APRHGSLGFLPKKRT+KH GKIRSFP+DD +KPPHLTAFMAYKAGMTH+ REVDR GSK+HKKEVVEAVTI+EAPPM VVG+VGYV TP GLRTLTTVWAEHLS+E++RRFYKNWYKSKKKAFT+YAKK++E Sbjct: 1 MSHRKFRAPRHGSLGFLPKKRTKKHRGKIRSFPKDDPAKPPHLTAFMAYKAGMTHVVREVDRSGSKMHKKEVVEAVTILEAPPMKVVGVVGYVATPTGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTKYAKKWSE 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A7S3Y2B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B0_HETAK) HSP 1 Score: 243 bits (619), Expect = 2.640e-77 Identity = 121/139 (87.05%), Postives = 130/139 (93.53%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFEAPRHGSLGFLPKKRT+KH GKIRSFPRDDASKP HLTAFMAYKAGMTHI RE+D+PGSK +KKEVVEAVT++EAPPMV VG+VGYVETP+GLRTLTTVWA HL E VKRRFYKNWYKSKKKAFT+YAKKY E Sbjct: 1 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPTHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYE 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A4D9CSA0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA0_9STRA) HSP 1 Score: 243 bits (619), Expect = 8.130e-76 Identity = 118/140 (84.29%), Postives = 132/140 (94.29%), Query Frame = 1 Query: 1 VMSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 +MSHRKF APRHGSLGFLPKKRT+KH GKIRSFP+DD +KPPHLTAFMAYKAGMTH+ REVDR GSK+HKKEVVEAVTI+EAPPM VVG+VGYV TP GLRTLTTVWAEHLS+E++RRFYKNWYKSKKKAFT+YAKK++E Sbjct: 228 IMSHRKFRAPRHGSLGFLPKKRTKKHRGKIRSFPKDDPAKPPHLTAFMAYKAGMTHVVREVDRSGSKMHKKEVVEAVTILEAPPMKVVGVVGYVATPTGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTKYAKKWSE 367
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A835YUS8_9STRA (Ribosomal protein L3 superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS8_9STRA) HSP 1 Score: 239 bits (609), Expect = 9.830e-76 Identity = 120/139 (86.33%), Postives = 129/139 (92.81%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFEAPR GSLGFLPKKRT+KH GKIRSFPRDDASKP LTAFMAYKAGMTH+ REV+RPGSK+HKKE VEAVTI+E PPMVVVG+VGYVETP GLRTLTTVWAEHLS+E++RRFYKNWYKSKKKAFTRYAKK E Sbjct: 1 MSHRKFEAPRRGSLGFLPKKRTKKHFGKIRSFPRDDASKPCQLTAFMAYKAGMTHVVREVERPGSKLHKKETVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTRYAKKCAE 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A6H5JYN6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYN6_9PHAE) HSP 1 Score: 237 bits (605), Expect = 8.810e-75 Identity = 119/140 (85.00%), Postives = 130/140 (92.86%), Query Frame = 1 Query: 1 VMSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFEAPR+GSLGFLPKKRT+KH G IRSFP+DDA+K PHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTI+E PP+VVVG+VGYVETP GLRTLTTVWA HLS+E KRRFYK+WY SKKKAFTRYAKK+ + Sbjct: 30 TMSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYKHWYTSKKKAFTRYAKKFAD 169
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A7S1Q204_ALECA (Hypothetical protein (Fragment) n=2 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q204_ALECA) HSP 1 Score: 232 bits (591), Expect = 1.740e-74 Identity = 112/139 (80.58%), Postives = 129/139 (92.81%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFE PRHGSLGFLP+KRT+ HHGKI+SFP+DDASKPPHLTAFM+YKAGMTHI R+V+RPGSK+HKKEV E VTIVEAPPMVVVG VGYVETP G+RTLT+VWA HLS+E KRRFYKNW+K+KKKAFT+Y K+++E Sbjct: 1 MSHRKFERPRHGSLGFLPRKRTKHHHGKIKSFPKDDASKPPHLTAFMSYKAGMTHIVRDVERPGSKLHKKEVAEGVTIVEAPPMVVVGFVGYVETPRGMRTLTSVWAGHLSDECKRRFYKNWHKAKKKAFTKYQKRWSE 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A3B4WQ71_SERLL (60S ribosomal protein L3-2-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4WQ71_SERLL) HSP 1 Score: 227 bits (578), Expect = 7.140e-74 Identity = 110/139 (79.14%), Postives = 125/139 (89.93%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFE PRHGSLGFLP+KR +H GK++SFP+DD SK PHLTAF+AYKAGMTHI R+VD+PGSK HKKEVVEAVT++EAPPMVVVG+VGYVET GLR LTTVWAEHL++EVKRRFYKNWY+SKKKAFT Y KKY + Sbjct: 1 MSHRKFERPRHGSLGFLPRKRASRHRGKVKSFPKDDRSKAPHLTAFLAYKAGMTHILRDVDKPGSKAHKKEVVEAVTVLEAPPMVVVGMVGYVETAKGLRALTTVWAEHLNDEVKRRFYKNWYRSKKKAFTNYVKKYAD 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A2R5GAY6_9STRA (60S ribosomal protein L3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAY6_9STRA) HSP 1 Score: 234 bits (596), Expect = 7.590e-74 Identity = 116/139 (83.45%), Postives = 128/139 (92.09%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 420 MSHRKFEAPRHGSLGFLP+KR++ H GKIR+FP+DDASK HLTAFMAYKAGMTH+ R VD+PGS VHKKEV+EAVTI+EAPPMV VGIVGY+ETP GLR+LTTVWAEHLSEE KRRFYKNWY SKKKAFT+YAKKYTE Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRSKHHRGKIRAFPKDDASKDTHLTAFMAYKAGMTHVTRTVDKPGSNVHKKEVLEAVTILEAPPMVGVGIVGYIETPRGLRSLTTVWAEHLSEEAKRRFYKNWYHSKKKAFTKYAKKYTE 139
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A8K1FED4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED4_PYTOL) HSP 1 Score: 234 bits (596), Expect = 8.490e-74 Identity = 115/137 (83.94%), Postives = 127/137 (92.70%), Query Frame = 1 Query: 4 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKY 414 M HRKFEAPRHG LGFLPKKRT+ H G++R FPRDDASK PHLTAFM YKAGMTHI REVDRPGSKVHKKEVVEAVTI+E PPMVVVG+VGY+ETP GLRTLTTV+AEHL+EEVKRRFYKNWY+SK+KAFT+Y+KKY Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIVREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLNEEVKRRFYKNWYRSKRKAFTKYSKKY 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10346.1.1 >prot_P-wetherbeei_contig10346.1.1 ID=prot_P-wetherbeei_contig10346.1.1|Name=mRNA_P-wetherbeei_contig10346.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKback to top mRNA from alignment at P-wetherbeei_contig10346:3..728- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10346.1.1 ID=mRNA_P-wetherbeei_contig10346.1.1|Name=mRNA_P-wetherbeei_contig10346.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=726bp|location=Sequence derived from alignment at P-wetherbeei_contig10346:3..728- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10346:3..728- >mRNA_P-wetherbeei_contig10346.1.1 ID=mRNA_P-wetherbeei_contig10346.1.1|Name=mRNA_P-wetherbeei_contig10346.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig10346:3..728- (Phaeothamnion wetherbeei SAG_119_79)back to top |