prot_P-wetherbeei_contig10346.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig10346.1.1
Unique Name	prot_P-wetherbeei_contig10346.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	139

Homology

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A7S2V865_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V865_9STRA)

HSP 1 Score: 249 bits (637), Expect = 5.300e-80
Identity = 122/139 (87.77%), Postives = 135/139 (97.12%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFEAPRHGSLGFLPKKRT+ HHG+IR+FP+DDASKPPHLTAFMAYKAGMTHI REV+RPGSK+HKKEVVEAVTI+EAPPM+VVG+VGYVETP GLR+LTTVWAEHLSEE KRRFYKNWYKSK+KAFT+YAKKYT+
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKHHHGRIRTFPKDDASKPPHLTAFMAYKAGMTHIVREVERPGSKLHKKEVVEAVTIMEAPPMMVVGLVGYVETPRGLRSLTTVWAEHLSEECKRRFYKNWYKSKRKAFTKYAKKYTD 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: W7T3X6_9STRA (60s ribosomal protein l3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3X6_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.490e-79
Identity = 118/139 (84.89%), Postives = 131/139 (94.24%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKF APRHGSLGFLPKKRT+KH GKIRSFP+DD +KPPHLTAFMAYKAGMTH+ REVDR GSK+HKKEVVEAVTI+EAPPM VVG+VGYV TP GLRTLTTVWAEHLS+E++RRFYKNWYKSKKKAFT+YAKK++E
Sbjct:    1 MSHRKFRAPRHGSLGFLPKKRTKKHRGKIRSFPKDDPAKPPHLTAFMAYKAGMTHVVREVDRSGSKMHKKEVVEAVTILEAPPMKVVGVVGYVATPTGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTKYAKKWSE 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A7S3Y2B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B0_HETAK)

HSP 1 Score: 243 bits (619), Expect = 2.540e-77
Identity = 121/139 (87.05%), Postives = 130/139 (93.53%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFEAPRHGSLGFLPKKRT+KH GKIRSFPRDDASKP HLTAFMAYKAGMTHI RE+D+PGSK +KKEVVEAVT++EAPPMV VG+VGYVETP+GLRTLTTVWA HL E VKRRFYKNWYKSKKKAFT+YAKKY E
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPTHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYE 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A835YUS8_9STRA (Ribosomal protein L3 superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS8_9STRA)

HSP 1 Score: 239 bits (609), Expect = 9.440e-76
Identity = 120/139 (86.33%), Postives = 129/139 (92.81%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFEAPR GSLGFLPKKRT+KH GKIRSFPRDDASKP  LTAFMAYKAGMTH+ REV+RPGSK+HKKE VEAVTI+E PPMVVVG+VGYVETP GLRTLTTVWAEHLS+E++RRFYKNWYKSKKKAFTRYAKK  E
Sbjct:    1 MSHRKFEAPRRGSLGFLPKKRTKKHFGKIRSFPRDDASKPCQLTAFMAYKAGMTHVVREVERPGSKLHKKETVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTRYAKKCAE 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A4D9CSA0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA0_9STRA)

HSP 1 Score: 241 bits (615), Expect = 3.090e-75
Identity = 118/139 (84.89%), Postives = 131/139 (94.24%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKF APRHGSLGFLPKKRT+KH GKIRSFP+DD +KPPHLTAFMAYKAGMTH+ REVDR GSK+HKKEVVEAVTI+EAPPM VVG+VGYV TP GLRTLTTVWAEHLS+E++RRFYKNWYKSKKKAFT+YAKK++E
Sbjct:  229 MSHRKFRAPRHGSLGFLPKKRTKKHRGKIRSFPKDDPAKPPHLTAFMAYKAGMTHVVREVDRSGSKMHKKEVVEAVTILEAPPMKVVGVVGYVATPTGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTKYAKKWSE 367

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A6H5JYN6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYN6_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.200e-74
Identity = 119/139 (85.61%), Postives = 130/139 (93.53%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFEAPR+GSLGFLPKKRT+KH G IRSFP+DDA+K PHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTI+E PP+VVVG+VGYVETP GLRTLTTVWA HLS+E KRRFYK+WY SKKKAFTRYAKK+ +
Sbjct:   31 MSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYKHWYTSKKKAFTRYAKKFAD 169

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A7S1Q204_ALECA (Hypothetical protein (Fragment) n=2 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q204_ALECA)

HSP 1 Score: 232 bits (591), Expect = 1.670e-74
Identity = 112/139 (80.58%), Postives = 129/139 (92.81%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFE PRHGSLGFLP+KRT+ HHGKI+SFP+DDASKPPHLTAFM+YKAGMTHI R+V+RPGSK+HKKEV E VTIVEAPPMVVVG VGYVETP G+RTLT+VWA HLS+E KRRFYKNW+K+KKKAFT+Y K+++E
Sbjct:    1 MSHRKFERPRHGSLGFLPRKRTKHHHGKIKSFPKDDASKPPHLTAFMSYKAGMTHIVRDVERPGSKLHKKEVAEGVTIVEAPPMVVVGFVGYVETPRGMRTLTSVWAGHLSDECKRRFYKNWHKAKKKAFTKYQKRWSE 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A3B4WQ71_SERLL (60S ribosomal protein L3-2-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4WQ71_SERLL)

HSP 1 Score: 227 bits (578), Expect = 6.860e-74
Identity = 110/139 (79.14%), Postives = 125/139 (89.93%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFE PRHGSLGFLP+KR  +H GK++SFP+DD SK PHLTAF+AYKAGMTHI R+VD+PGSK HKKEVVEAVT++EAPPMVVVG+VGYVET  GLR LTTVWAEHL++EVKRRFYKNWY+SKKKAFT Y KKY +
Sbjct:    1 MSHRKFERPRHGSLGFLPRKRASRHRGKVKSFPKDDRSKAPHLTAFLAYKAGMTHILRDVDKPGSKAHKKEVVEAVTVLEAPPMVVVGMVGYVETAKGLRALTTVWAEHLNDEVKRRFYKNWYRSKKKAFTNYVKKYAD 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A2R5GAY6_9STRA (60S ribosomal protein L3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAY6_9STRA)

HSP 1 Score: 234 bits (596), Expect = 7.290e-74
Identity = 116/139 (83.45%), Postives = 128/139 (92.09%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE 139
            MSHRKFEAPRHGSLGFLP+KR++ H GKIR+FP+DDASK  HLTAFMAYKAGMTH+ R VD+PGS VHKKEV+EAVTI+EAPPMV VGIVGY+ETP GLR+LTTVWAEHLSEE KRRFYKNWY SKKKAFT+YAKKYTE
Sbjct:    1 MSHRKFEAPRHGSLGFLPRKRSKHHRGKIRAFPKDDASKDTHLTAFMAYKAGMTHVTRTVDKPGSNVHKKEVLEAVTILEAPPMVGVGIVGYIETPRGLRSLTTVWAEHLSEEAKRRFYKNWYHSKKKAFTKYAKKYTE 139

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BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Match: A0A8K1FED4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED4_PYTOL)

HSP 1 Score: 234 bits (596), Expect = 8.150e-74
Identity = 115/137 (83.94%), Postives = 127/137 (92.70%), Query Frame = 0

Query:    1 MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLRTLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKY 137
            M HRKFEAPRHG LGFLPKKRT+ H G++R FPRDDASK PHLTAFM YKAGMTHI REVDRPGSKVHKKEVVEAVTI+E PPMVVVG+VGY+ETP GLRTLTTV+AEHL+EEVKRRFYKNWY+SK+KAFT+Y+KKY
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIVREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLNEEVKRRFYKNWYRSKRKAFTKYSKKY 137

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig10346.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2V865_9STRA	5.300e-80	87.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
W7T3X6_9STRA	1.490e-79	84.89	60s ribosomal protein l3 n=1 Tax=Nannochloropsis g...	[more]
A0A7S3Y2B0_HETAK	2.540e-77	87.05	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835YUS8_9STRA	9.440e-76	86.33	Ribosomal protein L3 superfamily protein n=1 Tax=T...	[more]
A0A4D9CSA0_9STRA	3.090e-75	84.89	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A6H5JYN6_9PHAE	1.200e-74	85.61	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S1Q204_ALECA	1.670e-74	80.58	Hypothetical protein (Fragment) n=2 Tax=Alexandriu...	[more]
A0A3B4WQ71_SERLL	6.860e-74	79.14	60S ribosomal protein L3-2-like n=1 Tax=Seriola la...	[more]
A0A2R5GAY6_9STRA	7.290e-74	83.45	60S ribosomal protein L3 n=1 Tax=Hondaea fermental...	[more]
A0A8K1FED4_PYTOL	8.150e-74	83.94	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1430.10		coord: 83..138 e-value: 2.6E-75 score: 255.6
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 44..82 e-value: 2.6E-75 score: 255.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..40
None	No IPR available	PANTHER	PTHR11363:SF4	60S RIBOSOMAL PROTEIN L3	coord: 1..137
IPR044892	Ribosomal protein L3, domain 3, archaeal type superfamily	GENE3D	4.10.960.10	Ribosomal protein L3, domain 3	coord: 1..43 e-value: 2.6E-75 score: 255.6
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 1..138 e-value: 1.8E-69 score: 234.5
IPR045077	Ribosomal protein L3, archaeal/eukaryotic type	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 1..137
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 4..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig10346	contig	P-wetherbeei_contig10346:3..725 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig10346.1.1	mRNA_P-wetherbeei_contig10346.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig10346 3..728 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig10346.1.1 ID=prot_P-wetherbeei_contig10346.1.1|Name=mRNA_P-wetherbeei_contig10346.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
MSHRKFEAPRHGSLGFLPKKRTRKHHGKIRSFPRDDASKPPHLTAFMAYK
AGMTHIAREVDRPGSKVHKKEVVEAVTIVEAPPMVVVGIVGYVETPAGLR
TLTTVWAEHLSEEVKRRFYKNWYKSKKKAFTRYAKKYTE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR044892	Ribosomal_L3_dom_3_arc_sf
IPR000597	Ribosomal_L3
IPR045077	L3_arc_euk
IPR009000	Transl_B-barrel_sf