prot_P-wetherbeei_contig14053.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14053.2.1
Unique Nameprot_P-wetherbeei_contig14053.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length156
Homology
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BLAST of mRNA_P-wetherbeei_contig14053.2.1 vs. uniprot
Match: A0A537TMX2_9PROT (DUF1236 domain-containing protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TMX2_9PROT)

HSP 1 Score: 52.4 bits (124), Expect = 1.960e-5
Identity = 41/114 (35.96%), Postives = 54/114 (47.37%), Query Frame = 0 
Query:   45 LTPSQRESIYRIITER-----PLRPNPVVTERVLPPTAPKPVEPIRSSADAVPPPAIPDRRLKVGAVVXXXIALHPIPVGAVAAVPEIEPFRYAFVGDRVLLVDPRNGRVVAAI 153
            LTP+QR +IYR I  +     P+    +VTE V P            SA A            VG+ V    AL P+P   VA VP +  +RY  + +R+LLVDP  G VVA +
Sbjct:   70 LTPAQRTTIYRTIIPQGRGRGPIVREQIVTEPVAPAXXXXXXXXXXGSAYAY----------AVGSRVADAYALAPVPQSVVATVPAVRSYRYMVINNRLLLVDPATGTVVAEV 173
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14053.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A537TMX2_9PROT1.960e-535.96DUF1236 domain-containing protein n=3 Tax=Alphapro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009642Protein of unknown function DUF1236PFAMPF06823DUF1236coord: 96..153
e-value: 4.7E-10
score: 39.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14053contigP-wetherbeei_contig14053:900..1367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14053.2.1mRNA_P-wetherbeei_contig14053.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14053 900..1367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14053.2.1 ID=prot_P-wetherbeei_contig14053.2.1|Name=mRNA_P-wetherbeei_contig14053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MPVRHAVRTPAIKPKAQAWKPVTRKPVATAERGEDAEANASAIPLTPSQR
ESIYRIITERPLRPNPVVTERVLPPTAPKPVEPIRSSADAVPPPAIPDRR
LKVGAVVPPVIALHPIPVGAVAAVPEIEPFRYAFVGDRVLLVDPRNGRVV
AAINQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009642DUF1236