prot_P-wetherbeei_contig1402.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1402.3.1
Unique Nameprot_P-wetherbeei_contig1402.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length61
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1402.3.1 vs. uniprot
Match: A0A261XWW3_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XWW3_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 2.270e-5
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:    2 QPRRRVPLRATCDRCSRLRKKCDSMKPWCSRCQRANSSCVYSPL 45
            +P++R  +   C+RC RL++KCD+  P C RCQ +N  CVY+ L
Sbjct:  316 KPKKRAKVPQACERCRRLKRKCDAQYPVCRRCQYSNDECVYANL 359
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1402.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A261XWW3_9FUNG2.270e-545.45Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 7..51
e-value: 0.0042
score: 26.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 13..45
e-value: 4.1E-8
score: 33.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 12..40
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 12..42
score: 10.304
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 13..43
e-value: 2.00791E-4
score: 32.6354
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 4..58
e-value: 6.6E-8
score: 34.4
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 3..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1402contigP-wetherbeei_contig1402:1429..1967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1402.3.1mRNA_P-wetherbeei_contig1402.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1402 1176..1967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1402.3.1 ID=prot_P-wetherbeei_contig1402.3.1|Name=mRNA_P-wetherbeei_contig1402.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=61bp
MQPRRRVPLRATCDRCSRLRKKCDSMKPWCSRCQRANSSCVYSPLRRPCR
ALGGTSQSPLL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf