mRNA_P-wetherbeei_contig136.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig136.1.3
Unique NamemRNA_P-wetherbeei_contig136.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA)

HSP 1 Score: 350 bits (899), Expect = 4.530e-115
Identity = 175/261 (67.05%), Postives = 211/261 (80.84%), Query Frame = 3
Query:   60 KSKGVFGT-RSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNMSPKRAVGHVAKDDPLDHV----LAASAPSYSN 827
            ++K ++ T  ++D+IF++NK+WV   L +DP +F RLK AQ P  LYIGCSDSRVPAQNMLGLT G+LFVHRNVANLC+NTD+SLLSVLTYAVEVL+VTDIIVCGHY CGGVRAAMEN+DHGLLEHWL +IRNVQRLHQAEL EI + E RHQRLVELNVQE CM+LFANP+VQ++QA +A PRIHGWVYD+ +GLLKD+KIDF+ EIRKYK+IY LY+FP+ +     +P    G +    PL  V    LAA+A S S+
Sbjct:    9 RAKSIWDTAENLDYIFDSNKRWVQDCLEEDPEIFTRLKYAQAPKYLYIGCSDSRVPAQNMLGLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFRTEIRKYKNIYSLYEFPKSTIAGASAPVAPNGRMT---PLKKVPQEALAAAADSSSS 266          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: H6WB75_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB75_VAULI)

HSP 1 Score: 336 bits (862), Expect = 4.160e-109
Identity = 164/263 (62.36%), Postives = 206/263 (78.33%), Query Frame = 3
Query:   27 TAMVKRSHLTRKSKGVFGTRS-MDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNMSPKRAVGHVAK--DDPLDHVLAA 806
            TA+   +  T KSK ++   S ++ +FENNKKWV  S+  DP VF RLK+AQQP  LYIGCSDSRVPAQNMLGL  G+LFV RNVANLCIN+DFSLLSVL +++EVL+VTD+IVCGHY CGGV AAM+N+DHGLLEHWL +IRNVQRLH++EL +I D   R +RLVELNVQE C++LF+NPIVQ++QA  + PRIHGWVYD+ATG +KD+KIDFK EI+KY+DIYRLYDFP G     M+    V  +++  D+  + ++ A
Sbjct:   32 TAIKSTTEDTEKSKSIWSLDSPLEHLFENNKKWVRESVEKDPEVFTRLKDAQQPKYLYIGCSDSRVPAQNMLGLQAGELFVIRNVANLCINSDFSLLSVLLFSIEVLEVTDVIVCGHYGCGGVNAAMKNKDHGLLEHWLHHIRNVQRLHKSELVQIPDESQRFKRLVELNVQESCLNLFSNPIVQKKQATASQPRIHGWVYDIATGYVKDLKIDFKTEIKKYRDIYRLYDFPGGGAGPGMTGAMNVNMISQKADEAAEQLIGA 294          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA)

HSP 1 Score: 332 bits (852), Expect = 1.580e-107
Identity = 159/231 (68.83%), Postives = 191/231 (82.68%), Query Frame = 3
Query:   87 SMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPR--GSGNRNMSPKRAVGHVA 773
            SMD+IF+NN+ WV+ ++++DP  F+RL  +QQP  LYIGCSDSRVPAQNM+GLT G+LFV RNVANLC+NTD SLL+ LTYAV VL+VTDIIVCGHY CGGVRAAMEN DHGLLEHWL  IRNVQRLH  EL+ I D + RH+RLVELNVQE C++LFANPIVQ++QA  + P+IHGWVYDVATGLLK + IDFK+EIRKY+D+YRLY+FPR   + N  M+P+R     A
Sbjct:   82 SMDYIFQNNRDWVEGTISEDPDTFKRLATSQQPKYLYIGCSDSRVPAQNMMGLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFKSEIRKYQDVYRLYEFPRRNSTSNEAMAPRRKGASAA 312          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: D8LR72_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR72_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 3.780e-102
Identity = 155/236 (65.68%), Postives = 184/236 (77.97%), Query Frame = 3
Query:   87 SMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPR-----GSGNRNMSPKRAVGHVAKD 779
            S D+IF NN+ WV+  LA DP  F+RL N+Q+P  +YIGCSDSRVPAQNM+GL  G+LFV RNVANLC+NTD SLL+ L YAV VL+VTDIIVCGHY CGGVRAAMEN DHGLLEHWL  IRNV RLH  ELQ ISD + + +RLVELNVQE C++LFANPIVQ++QA  ++P+IHGW YDV  GLLK++ IDFKAEIRKY+D+YRLY+FPR        N +M P+R   H   D
Sbjct:   87 STDYIFANNRAWVEERLAQDPDTFKRLANSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALAYAVNVLEVTDIIVCGHYGCGGVRAAMENIDHGLLEHWLLNIRNVVRLHNEELQGISDMDEKSRRLVELNVQESCINLFANPIVQKKQATHSMPKIHGWAYDVGNGLLKELDIDFKAEIRKYRDVYRLYEFPRRPPSHNGANGSMVPRRRDRHRVVD 322          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK)

HSP 1 Score: 276 bits (707), Expect = 1.140e-86
Identity = 132/220 (60.00%), Postives = 166/220 (75.45%), Query Frame = 3
Query:   57 RKSKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDF 716
            R  +G+F   S + +FENN+KWV     +DP  F+ L   Q P  L+IGC+DSR+PAQ +LGL  G+LFVHRNVANL +N D +LL+VL Y+VEVLKV DIIVCGHY CGG++AA  N DHGL+EHWL  IR++ RLH  EL+ I   E RH+RLVELNVQEQC++L+ANPIVQ+ Q   +LPRIHG+VYD+A GL+K++ IDFKAEI K K  Y LY+F
Sbjct:   28 RYIQGIFDKPSFEQLFENNRKWVAEQKKNDPDYFKNLAKGQSPKYLFIGCADSRIPAQEVLGLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFKAEISKIKQHYSLYNF 247          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.500e-85
Identity = 133/215 (61.86%), Postives = 163/215 (75.81%), Query Frame = 3
Query:   99 IFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAME-NEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRN 740
            IFENNKKWV   L +DP  F++LK  Q+P  L+IGCSDSRVPA  ++GL+ G +FVHRNVANL +N D +LLSVL Y+VEVLKV D+IVCGHY CGGV+AA     DHGLLEHWL  I++V R+HQ EL  I D E RH+RLVEL+VQEQC++LFANPIVQR Q     PRIHG+VYD+  G L++++IDFK E+ K KDIY  YDF +  GN +
Sbjct:   45 IFENNKKWVHKHLEEDPDYFKKLKMGQKPRYLFIGCSDSRVPANEIMGLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFKKEVSKLKDIYSHYDFSKIPGNED 259          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL)

HSP 1 Score: 268 bits (686), Expect = 6.620e-82
Identity = 128/227 (56.39%), Postives = 167/227 (73.57%), Query Frame = 3
Query:   63 SKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNM 743
            ++  F   +++ IFENN+KW +     DP  F+RLK  Q+P  L+IGC+DSR+PAQ ++G+  G++FVHRNVANL +N D +LLSV+ YAVEVL V DIIVCGHY CGGVRAA  N+DHGL+EHW+  IR+V RLH+ EL  ++  E+RH+RLVELNVQEQC++LFANPI+QRRQA   LPRIHG VYDV  GLL+ + +DFK  IR+ + IY    F      R++
Sbjct:  125 NRSPFDDENLETIFENNRKWAEQMRKTDPNFFKRLKQGQEPKYLFIGCADSRIPAQELMGMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNELAVLTG-EMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFKHSIREMRHIYDTGHFSNWKAMRDL 350          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A835YJA7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA7_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.140e-77
Identity = 114/206 (55.34%), Postives = 155/206 (75.24%), Query Frame = 3
Query:   99 IFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDF 716
            + +NN++WV+  L +DP  F+   +  +P  L+IGCSD+R+  QNMLGL +GQLFVHRNVAN  +NTD + ++ LTYAVE LKV +II+CGHY+CGGV+AAM N DHG++E W+  IR+V R H+ EL+ I DP+L H+R+VELNVQEQ + L+ANP+VQR QAQ   P IH  V+DV  GLLK++ +DFK  I+KY  +Y +Y+F
Sbjct:    2 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 207          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A8K1CIH3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIH3_PYTOL)

HSP 1 Score: 246 bits (629), Expect = 4.320e-74
Identity = 123/233 (52.79%), Postives = 158/233 (67.81%), Query Frame = 3
Query:   87 SMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFP------RGSGNRNMSPKRAVGH 767
            S++ +FENNKKW D     DP  F++    Q P  L+IGCSDSRVPA+ + GL  G++FVHRNVAN+ ++ D S LSV+ YAVE LKV DIIVCGHY CGGVRAA+EN   GLL++WL  IR+V RLH  ELQ+I D E R  R++ELN  EQCM++F   +VQR Q +   PRIHG VY++  G LK++ +DF++ I+KY+ IYRL+ FP      RG    NM      GH
Sbjct:   29 SLERLFENNKKWRDGKKLLDPDYFDKTSKGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANMVVSNDVSALSVIQYAVEHLKVKDIIVCGHYGCGGVRAAVENRHMGLLDNWLRNIRDVCRLHHTELQDIDDAEDRLNRIIELNTVEQCMNIFKTGLVQRHQVKYGFPRIHGLVYNIQNGELKELDVDFQSYIKKYRSIYRLHSFPTETPLRRGQLQANMVRALIDGH 261          
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A2P4XQJ3_9STRA (Carbonic anhydrase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQJ3_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.240e-72
Identity = 120/225 (53.33%), Postives = 157/225 (69.78%), Query Frame = 3
Query:   51 LTRKSKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRG 725
            L+R    +    S++ +FENNKKW +     DP  F++    Q P  L+IGCSDSRVPA+ + GL  G++FVHRNVANL ++ D S LSV+ YAVE LKV DIIVCGHY CGGVRAA+EN+  GLL++WL  IR+V R+H  ELQEI D E R +R VELN  EQC+++F   +VQR Q +   PRIHG VYD+  G L ++ IDF++ +RKY+ IY+L+ FP G
Sbjct:   22 LSRAVSSMALPTSLERLFENNKKWREGKKLLDPDYFDKTSQGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANLVVSNDISSLSVVQYAVEHLKVKDIIVCGHYGCGGVRAAVENKSLGLLDNWLRNIRDVVRIHNDELQEIGDQEDRMRRTVELNTIEQCINVFKIGLVQRHQVKYGFPRIHGLVYDLKNGQLNEMDIDFQSYVRKYRSIYKLHSFPEG 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBM8_9STRA4.530e-11567.05Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=3... [more]
H6WB75_VAULI4.160e-10962.36Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]
A0A1W6IYH0_SACJA1.580e-10768.83Carbonic anhydrase n=2 Tax=Saccharina japonica Tax... [more]
D8LR72_ECTSI3.780e-10265.68Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6S9IM72_HETAK1.140e-8660.00Carbonic anhydrase n=1 Tax=Heterosigma akashiwo Ta... [more]
A0A7S2XTK6_9STRA2.500e-8561.86Carbonic anhydrase n=1 Tax=Fibrocapsa japonica Tax... [more]
A0A7S1N9X7_9EUGL6.620e-8256.39Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica... [more]
A0A835YJA7_9STRA1.140e-7755.34Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A8K1CIH3_PYTOL4.320e-7452.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4XQJ3_9STRA1.240e-7253.33Carbonic anhydrase n=1 Tax=Phytophthora palmivora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig136contigP-wetherbeei_contig136:1928..4407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR72
PFAMsPro_CA
Model size1580
Max annot lvl2759|Eukaryota
KEGG rclassRC02807
KEGG koko:K01673
KEGG ReactionR00132,R10092
KEGG Pathwayko00910,map00910
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.43e-106
EggNOG OGsCOG0288@1|root,KOG1578@2759|Eukaryota
Ec32 ortholog descriptioncarbonic anhydrase
Ec32 orthologEc-06_004120.1
EC4.2.1.1
Descriptioncarbonate dehydratase activity
Cds size882
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig136.1.3prot_P-wetherbeei_contig136.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig136 2594..4375 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.7261236-UTR-P-wetherbeei_contig136:1927..25931683185991.7261236-UTR-P-wetherbeei_contig136:1927..2593Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig136 1928..2593 -
1683185991.7801962-UTR-P-wetherbeei_contig136:4375..44071683185991.7801962-UTR-P-wetherbeei_contig136:4375..4407Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig136 4376..4407 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.73483-CDS-P-wetherbeei_contig136:2593..28151683185991.73483-CDS-P-wetherbeei_contig136:2593..2815Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig136 2594..2815 -
1683185991.7442572-CDS-P-wetherbeei_contig136:3156..36091683185991.7442572-CDS-P-wetherbeei_contig136:3156..3609Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig136 3157..3609 -
1683185991.7520719-CDS-P-wetherbeei_contig136:4021..41721683185991.7520719-CDS-P-wetherbeei_contig136:4021..4172Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig136 4022..4172 -
1683185991.7626014-CDS-P-wetherbeei_contig136:4319..43751683185991.7626014-CDS-P-wetherbeei_contig136:4319..4375Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig136 4320..4375 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig136.1.3

>prot_P-wetherbeei_contig136.1.3 ID=prot_P-wetherbeei_contig136.1.3|Name=mRNA_P-wetherbeei_contig136.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp
MVKRSHLTRKSKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQ
PTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYA
VEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAEL
QEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDV
ATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNMSPKRAVGHVAKDD
PLDHVLAASAPSYSNSNDADHADDSGAEAVRAAVAAAAAALSP*
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mRNA from alignment at P-wetherbeei_contig136:1928..4407-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig136.1.3 ID=mRNA_P-wetherbeei_contig136.1.3|Name=mRNA_P-wetherbeei_contig136.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2480bp|location=Sequence derived from alignment at P-wetherbeei_contig136:1928..4407- (Phaeothamnion wetherbeei SAG_119_79)
CAATGCGCGGCTTGCAATGAAGCTAAACGGCGATGGTCAAGAGGAGTCAC CTTACAAGAAAGTCCAAAGGAGTCTTTGGGACGCGGAGGTGAGCAGGTTT TCTTCCACCCGATTCTCATAGCCTACCATTGCGTCCGCTGTGCTTACCAA GGCTAGCCCGCAGGAATGCCATCGCCCTTTTCCAGTAGATCCAACACCTG CCCAATTGCCCCACCAATACCCCTCTGTAGGGCAGTATGGACTTTATCTT TGAGAACAACAAGAAATGGGTCGACGCCTCGCTTGCGGACGACCCAATGG TCTTCGAGCGCCTGAAAAATGCGCAGCAGCCGACCATGCTGTACATCGGC TGCTCAGACTCGCGCGTCCCCGCGCAAAATATGCTGGTGAGTGGTTGCGT TCTCAACAGAGTTGGAATAGGGCGGCGGGTGGAGTTATCTCCTTCTCCTG GAGCATACTTGAAATGAAGAAAAATGTCGTCCAGCTTGTGGATTCGTGAA AGAGGAATTGATTGGTCTTTTTCATCCTGTCTCGAGTTGCTTGGCGTGTC TCTTGTGCAAGTCGAAGCTTTTCTTGTTTCCATTAACCTTGTGCATCCAT CCATCTGACAGCACACGATCTCTCATTCCCTTTCACCCATCCATCGCTCG TCCGTCGCGTCATCCTCTCATGTGAATGAATGGACCAATGCACCGGCTCC CCGGGGGGACGCGACGCGACGGTAACTGATACCAACAAACACACAAAAAA ACCATCGACGGCACGACACAATGGAAAAAATCCCCTCCTCTGTCATAGGG GCTGACGCTGGGGCAGCTGTTTGTGCACCGCAACGTGGCCAACCTGTGCA TCAACACAGACTTCTCGCTGCTCTCCGTCTTGACCTACGCCGTCGAGGTC CTGAAGGTGACCGACATCATCGTCTGCGGCCACTACAACTGCGGCGGCGT CCGCGCCGCCATGGAGAATGAGGACCACGGCCTGCTCGAGCACTGGCTGA CCTACATCCGAAACGTTCAGCGGTTACACCAGGCGGAGTTACAGGAAATT TCCGATCCCGAGCTGCGGCACCAGCGGCTGGTGGAGCTGAATGTGCAGGA GCAGTGCATGTCGCTGTTTGCCAACCCGATCGTGCAGCGGCGGCAGGCGC AGGAGGCGCTGCCGAGGATCCATGGGTGGGTGTACGACGTGGCGACGGGC CTGCTGAAGGACGTCAAGATCGACTTCAAGGCGGAGATCCGCAAGTACAA GGTTGGTTTGTGGTTGTTCCAGATGAGGATTGCTTCTTTCTGTTCGAATG TCAGAATCGTGATCTTGTTTATTGCAAACGAATGGTTGTGGCACAGAGTT TGAAGCTCTCGGCTTTTGAGCTGGACGGCCGTGAGAAGTGGAAAACTACA TACTGCTTGCCATCCGTTGCTAACAGAGGATTTCTGGAGGGGGGGGGGCG ATGCTTCACTCTTTTCTAAGCGTGCTTCATTTTTCGCGGTGTTTACCCAA TTCTGCGCTCTTAACAGCTCTTTCCATTTTTCGTCTGTCTCGTGTTTACC TGGTTCTCTCGGACCCAAATATCGCTGCTGCCTCCGCGGCAGGACATTTA CCGATTGTACGACTTTCCGCGGGGCTCCGGCAACCGCAACATGTCGCCGA AGCGGGCGGTGGGCCATGTGGCGAAGGACGACCCGCTCGACCATGTCCTG GCGGCGTCTGCGCCGAGCTACTCCAACTCCAATGACGCTGACCACGCCGA CGATTCCGGCGCCGAGGCGGTCCGGGCGGCGGTGGCAGCAGCGGCAGCAG CGCTGTCGCCATGACATGGCGTTCATCGATCGCTGGGGTGTCCGCTCGTG CTGAGGCAAGACCTGAGGGTGGTGCTGCCGCTACGGCGGCGGTAGCAGCG ACGGCGGTGGCGGCGGTGACAGCGCCTGGGGATTCCATTCGCAAGCGGCG GCGACTGCTAGGCGGCTTAGGCAGCGGAATCATTCTGTTGCGCACGTGTA TGCGTCATACGCAGGAGGCAGGTGGGGCTCGAGTTGATAAGTCTCCGGGA AGGGAACGGGCCGACCGTTTTTGGTTAGCATAGGAATAGATCGCGCCCGT TTCGCCGTTTCGGCTCCGGCAGCGGGGCTGCTCGTCTGAAAGAGAGTCTG GGGCGGTGCGGCTCCGGCGGCGGGGCTCCTCCGAAAGAGAGTCTGGGGCA GTGCGGACGCACTTCAAAGCGACGGGTCGGGAGCTTTGCTGTAGGTAGGT TACGGGAGGAAAGGAAATTTAGTTCCATCGGTCTGTGTCAGAGGGAGAGA AGTTTTTAGTGGGAAAATGGGAGGCCAGGGCGAGCAGCGGGCGCCTTCTG AGCAAGACCGTGTGGTTGGCTCTTTGGCACCGATGGGCAGCGCGGACGTG GGGCGAGCGGTGGCGTGAGAGAACCCTTACAGAAGGAGTTTCTAGCGAAT CGAATCATTAAAGAACACCATCACTCCTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig136:1928..4407-

>mRNA_P-wetherbeei_contig136.1.3 ID=mRNA_P-wetherbeei_contig136.1.3|Name=mRNA_P-wetherbeei_contig136.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig136:1928..4407- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCAAGAGGAGTCACCTTACAAGAAAGTCCAAAGGAGTCTTTGGGAC
GCGGAGTATGGACTTTATCTTTGAGAACAACAAGAAATGGGTCGACGCCT
CGCTTGCGGACGACCCAATGGTCTTCGAGCGCCTGAAAAATGCGCAGCAG
CCGACCATGCTGTACATCGGCTGCTCAGACTCGCGCGTCCCCGCGCAAAA
TATGCTGGGGCTGACGCTGGGGCAGCTGTTTGTGCACCGCAACGTGGCCA
ACCTGTGCATCAACACAGACTTCTCGCTGCTCTCCGTCTTGACCTACGCC
GTCGAGGTCCTGAAGGTGACCGACATCATCGTCTGCGGCCACTACAACTG
CGGCGGCGTCCGCGCCGCCATGGAGAATGAGGACCACGGCCTGCTCGAGC
ACTGGCTGACCTACATCCGAAACGTTCAGCGGTTACACCAGGCGGAGTTA
CAGGAAATTTCCGATCCCGAGCTGCGGCACCAGCGGCTGGTGGAGCTGAA
TGTGCAGGAGCAGTGCATGTCGCTGTTTGCCAACCCGATCGTGCAGCGGC
GGCAGGCGCAGGAGGCGCTGCCGAGGATCCATGGGTGGGTGTACGACGTG
GCGACGGGCCTGCTGAAGGACGTCAAGATCGACTTCAAGGCGGAGATCCG
CAAGTACAAGGACATTTACCGATTGTACGACTTTCCGCGGGGCTCCGGCA
ACCGCAACATGTCGCCGAAGCGGGCGGTGGGCCATGTGGCGAAGGACGAC
CCGCTCGACCATGTCCTGGCGGCGTCTGCGCCGAGCTACTCCAACTCCAA
TGACGCTGACCACGCCGACGATTCCGGCGCCGAGGCGGTCCGGGCGGCGG
TGGCAGCAGCGGCAGCAGCGCTGTCGCCATGA
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