mRNA_P-wetherbeei_contig136.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA) HSP 1 Score: 350 bits (899), Expect = 4.530e-115 Identity = 175/261 (67.05%), Postives = 211/261 (80.84%), Query Frame = 3
Query: 60 KSKGVFGT-RSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNMSPKRAVGHVAKDDPLDHV----LAASAPSYSN 827
++K ++ T ++D+IF++NK+WV L +DP +F RLK AQ P LYIGCSDSRVPAQNMLGLT G+LFVHRNVANLC+NTD+SLLSVLTYAVEVL+VTDIIVCGHY CGGVRAAMEN+DHGLLEHWL +IRNVQRLHQAEL EI + E RHQRLVELNVQE CM+LFANP+VQ++QA +A PRIHGWVYD+ +GLLKD+KIDF+ EIRKYK+IY LY+FP+ + +P G + PL V LAA+A S S+
Sbjct: 9 RAKSIWDTAENLDYIFDSNKRWVQDCLEEDPEIFTRLKYAQAPKYLYIGCSDSRVPAQNMLGLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFRTEIRKYKNIYSLYEFPKSTIAGASAPVAPNGRMT---PLKKVPQEALAAAADSSSS 266
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: H6WB75_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB75_VAULI) HSP 1 Score: 336 bits (862), Expect = 4.160e-109 Identity = 164/263 (62.36%), Postives = 206/263 (78.33%), Query Frame = 3
Query: 27 TAMVKRSHLTRKSKGVFGTRS-MDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNMSPKRAVGHVAK--DDPLDHVLAA 806
TA+ + T KSK ++ S ++ +FENNKKWV S+ DP VF RLK+AQQP LYIGCSDSRVPAQNMLGL G+LFV RNVANLCIN+DFSLLSVL +++EVL+VTD+IVCGHY CGGV AAM+N+DHGLLEHWL +IRNVQRLH++EL +I D R +RLVELNVQE C++LF+NPIVQ++QA + PRIHGWVYD+ATG +KD+KIDFK EI+KY+DIYRLYDFP G M+ V +++ D+ + ++ A
Sbjct: 32 TAIKSTTEDTEKSKSIWSLDSPLEHLFENNKKWVRESVEKDPEVFTRLKDAQQPKYLYIGCSDSRVPAQNMLGLQAGELFVIRNVANLCINSDFSLLSVLLFSIEVLEVTDVIVCGHYGCGGVNAAMKNKDHGLLEHWLHHIRNVQRLHKSELVQIPDESQRFKRLVELNVQESCLNLFSNPIVQKKQATASQPRIHGWVYDIATGYVKDLKIDFKTEIKKYRDIYRLYDFPGGGAGPGMTGAMNVNMISQKADEAAEQLIGA 294
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA) HSP 1 Score: 332 bits (852), Expect = 1.580e-107 Identity = 159/231 (68.83%), Postives = 191/231 (82.68%), Query Frame = 3
Query: 87 SMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPR--GSGNRNMSPKRAVGHVA 773
SMD+IF+NN+ WV+ ++++DP F+RL +QQP LYIGCSDSRVPAQNM+GLT G+LFV RNVANLC+NTD SLL+ LTYAV VL+VTDIIVCGHY CGGVRAAMEN DHGLLEHWL IRNVQRLH EL+ I D + RH+RLVELNVQE C++LFANPIVQ++QA + P+IHGWVYDVATGLLK + IDFK+EIRKY+D+YRLY+FPR + N M+P+R A
Sbjct: 82 SMDYIFQNNRDWVEGTISEDPDTFKRLATSQQPKYLYIGCSDSRVPAQNMMGLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFKSEIRKYQDVYRLYEFPRRNSTSNEAMAPRRKGASAA 312
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: D8LR72_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR72_ECTSI) HSP 1 Score: 320 bits (819), Expect = 3.780e-102 Identity = 155/236 (65.68%), Postives = 184/236 (77.97%), Query Frame = 3
Query: 87 SMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPR-----GSGNRNMSPKRAVGHVAKD 779
S D+IF NN+ WV+ LA DP F+RL N+Q+P +YIGCSDSRVPAQNM+GL G+LFV RNVANLC+NTD SLL+ L YAV VL+VTDIIVCGHY CGGVRAAMEN DHGLLEHWL IRNV RLH ELQ ISD + + +RLVELNVQE C++LFANPIVQ++QA ++P+IHGW YDV GLLK++ IDFKAEIRKY+D+YRLY+FPR N +M P+R H D
Sbjct: 87 STDYIFANNRAWVEERLAQDPDTFKRLANSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALAYAVNVLEVTDIIVCGHYGCGGVRAAMENIDHGLLEHWLLNIRNVVRLHNEELQGISDMDEKSRRLVELNVQESCINLFANPIVQKKQATHSMPKIHGWAYDVGNGLLKELDIDFKAEIRKYRDVYRLYEFPRRPPSHNGANGSMVPRRRDRHRVVD 322
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK) HSP 1 Score: 276 bits (707), Expect = 1.140e-86 Identity = 132/220 (60.00%), Postives = 166/220 (75.45%), Query Frame = 3
Query: 57 RKSKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDF 716
R +G+F S + +FENN+KWV +DP F+ L Q P L+IGC+DSR+PAQ +LGL G+LFVHRNVANL +N D +LL+VL Y+VEVLKV DIIVCGHY CGG++AA N DHGL+EHWL IR++ RLH EL+ I E RH+RLVELNVQEQC++L+ANPIVQ+ Q +LPRIHG+VYD+A GL+K++ IDFKAEI K K Y LY+F
Sbjct: 28 RYIQGIFDKPSFEQLFENNRKWVAEQKKNDPDYFKNLAKGQSPKYLFIGCADSRIPAQEVLGLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFKAEISKIKQHYSLYNF 247
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.500e-85 Identity = 133/215 (61.86%), Postives = 163/215 (75.81%), Query Frame = 3
Query: 99 IFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAME-NEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRN 740
IFENNKKWV L +DP F++LK Q+P L+IGCSDSRVPA ++GL+ G +FVHRNVANL +N D +LLSVL Y+VEVLKV D+IVCGHY CGGV+AA DHGLLEHWL I++V R+HQ EL I D E RH+RLVEL+VQEQC++LFANPIVQR Q PRIHG+VYD+ G L++++IDFK E+ K KDIY YDF + GN +
Sbjct: 45 IFENNKKWVHKHLEEDPDYFKKLKMGQKPRYLFIGCSDSRVPANEIMGLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFKKEVSKLKDIYSHYDFSKIPGNED 259
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL) HSP 1 Score: 268 bits (686), Expect = 6.620e-82 Identity = 128/227 (56.39%), Postives = 167/227 (73.57%), Query Frame = 3
Query: 63 SKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRGSGNRNM 743
++ F +++ IFENN+KW + DP F+RLK Q+P L+IGC+DSR+PAQ ++G+ G++FVHRNVANL +N D +LLSV+ YAVEVL V DIIVCGHY CGGVRAA N+DHGL+EHW+ IR+V RLH+ EL ++ E+RH+RLVELNVQEQC++LFANPI+QRRQA LPRIHG VYDV GLL+ + +DFK IR+ + IY F R++
Sbjct: 125 NRSPFDDENLETIFENNRKWAEQMRKTDPNFFKRLKQGQEPKYLFIGCADSRIPAQELMGMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNELAVLTG-EMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFKHSIREMRHIYDTGHFSNWKAMRDL 350
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A835YJA7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA7_9STRA) HSP 1 Score: 253 bits (645), Expect = 1.140e-77 Identity = 114/206 (55.34%), Postives = 155/206 (75.24%), Query Frame = 3
Query: 99 IFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDF 716
+ +NN++WV+ L +DP F+ + +P L+IGCSD+R+ QNMLGL +GQLFVHRNVAN +NTD + ++ LTYAVE LKV +II+CGHY+CGGV+AAM N DHG++E W+ IR+V R H+ EL+ I DP+L H+R+VELNVQEQ + L+ANP+VQR QAQ P IH V+DV GLLK++ +DFK I+KY +Y +Y+F
Sbjct: 2 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 207
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A8K1CIH3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIH3_PYTOL) HSP 1 Score: 246 bits (629), Expect = 4.320e-74 Identity = 123/233 (52.79%), Postives = 158/233 (67.81%), Query Frame = 3
Query: 87 SMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFP------RGSGNRNMSPKRAVGH 767
S++ +FENNKKW D DP F++ Q P L+IGCSDSRVPA+ + GL G++FVHRNVAN+ ++ D S LSV+ YAVE LKV DIIVCGHY CGGVRAA+EN GLL++WL IR+V RLH ELQ+I D E R R++ELN EQCM++F +VQR Q + PRIHG VY++ G LK++ +DF++ I+KY+ IYRL+ FP RG NM GH
Sbjct: 29 SLERLFENNKKWRDGKKLLDPDYFDKTSKGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANMVVSNDVSALSVIQYAVEHLKVKDIIVCGHYGCGGVRAAVENRHMGLLDNWLRNIRDVCRLHHTELQDIDDAEDRLNRIIELNTVEQCMNIFKTGLVQRHQVKYGFPRIHGLVYNIQNGELKELDVDFQSYIKKYRSIYRLHSFPTETPLRRGQLQANMVRALIDGH 261
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Match: A0A2P4XQJ3_9STRA (Carbonic anhydrase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQJ3_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.240e-72 Identity = 120/225 (53.33%), Postives = 157/225 (69.78%), Query Frame = 3
Query: 51 LTRKSKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQPTMLYIGCSDSRVPAQNMLGLTLGQLFVHRNVANLCINTDFSLLSVLTYAVEVLKVTDIIVCGHYNCGGVRAAMENEDHGLLEHWLTYIRNVQRLHQAELQEISDPELRHQRLVELNVQEQCMSLFANPIVQRRQAQEALPRIHGWVYDVATGLLKDVKIDFKAEIRKYKDIYRLYDFPRG 725
L+R + S++ +FENNKKW + DP F++ Q P L+IGCSDSRVPA+ + GL G++FVHRNVANL ++ D S LSV+ YAVE LKV DIIVCGHY CGGVRAA+EN+ GLL++WL IR+V R+H ELQEI D E R +R VELN EQC+++F +VQR Q + PRIHG VYD+ G L ++ IDF++ +RKY+ IY+L+ FP G
Sbjct: 22 LSRAVSSMALPTSLERLFENNKKWREGKKLLDPDYFDKTSQGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANLVVSNDISSLSVVQYAVEHLKVKDIIVCGHYGCGGVRAAVENKSLGLLDNWLRNIRDVVRIHNDELQEIGDQEDRMRRTVELNTIEQCINVFKIGLVQRHQVKYGFPRIHGLVYDLKNGQLNEMDIDFQSYVRKYRSIYKLHSFPEG 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig136.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig136.1.3 >prot_P-wetherbeei_contig136.1.3 ID=prot_P-wetherbeei_contig136.1.3|Name=mRNA_P-wetherbeei_contig136.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp MVKRSHLTRKSKGVFGTRSMDFIFENNKKWVDASLADDPMVFERLKNAQQback to top mRNA from alignment at P-wetherbeei_contig136:1928..4407- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig136.1.3 ID=mRNA_P-wetherbeei_contig136.1.3|Name=mRNA_P-wetherbeei_contig136.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2480bp|location=Sequence derived from alignment at P-wetherbeei_contig136:1928..4407- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig136:1928..4407- >mRNA_P-wetherbeei_contig136.1.3 ID=mRNA_P-wetherbeei_contig136.1.3|Name=mRNA_P-wetherbeei_contig136.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig136:1928..4407- (Phaeothamnion wetherbeei SAG_119_79)back to top |