prot_P-wetherbeei_contig1350.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK) HSP 1 Score: 146 bits (368), Expect = 2.020e-41 Identity = 69/125 (55.20%), Postives = 84/125 (67.20%), Query Frame = 0
Query: 32 TRFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVE 156
+RFE+ELEFVQCLS P YLH LAQN+YF+DPAF+ FL YL YW+RPEYAKF+ YPHCL F+++L D E FRKELA GF+++VHQQQFFHWQH+ RY +
Sbjct: 45 SRFEVELEFVQCLSSPEYLH----------------------YLAQNKYFEDPAFINFLHYLQYWRRPEYAKFIIYPHCLAFMEMLED---EAFRKELAKPGFKEFVHQQQFFHWQHYINNRYKD 144
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA) HSP 1 Score: 142 bits (358), Expect = 2.910e-40 Identity = 73/135 (54.07%), Postives = 86/135 (63.70%), Query Frame = 0
Query: 14 PQAPVDSAGALSTGVSARTRFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQH 148
P AP +A A G RFE+ELEFVQCL+ P YLH LAQ RYFDDPAF+AFL+YL+YW+RP+YAK++ YPHCL LD L +S+ FR EL ME FRD+VHQQQFFHWQH
Sbjct: 9 PPAPPTTAAAEDVGAQ---RFEVELEFVQCLASPEYLH----------------------FLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYLMYPHCLAMLDALLNSKR--FRSELLMESFRDFVHQQQFFHWQH 116
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A662WG80_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WG80_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.010e-36 Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 0
Query: 33 RFEIELEFVQCLSRPNYLHCGKKYVLLPPCTS--LPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHF 149
RF++ELEF+QCL+ P YL+C V P C S P Q + +LA NRYFD+PAF+ +L+YL YWK+P+YAK++ YPHCL FLD+L D E FR+ +A E F VH QQF+HWQ F
Sbjct: 16 RFQMELEFIQCLASPAYLNCAHAAVS-PVCLSSLAPPQAVRVEILAINRYFDNPAFMNYLQYLKYWKQPQYAKYIVYPHCLAFLDMLED---ERFRQMIAREDFMTLVHGQQFYHWQTF 130
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A662XX93_9STRA (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XX93_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.170e-34 Identity = 62/118 (52.54%), Postives = 81/118 (68.64%), Query Frame = 0
Query: 33 RFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTV-LAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHF 149
RF++ELEF+QCL+ P YL+C P + LP S + LA NRYFD+PAF+ +L+YL YWK+P+YAK++ YPHCL FLD+L D E FR+ +A E F VH QQF+HWQ F
Sbjct: 16 RFQMELEFIQCLASPAYLNCA--CAATSPVSRLPPLPSSFAIFLAINRYFDNPAFMNYLQYLKYWKQPQYAKYIVYPHCLAFLDMLED---ERFRQMIAREDFMTLVHGQQFYHWQTF 128
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: F0WII8_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Albugo TaxID=65356 RepID=F0WII8_9STRA) HSP 1 Score: 120 bits (302), Expect = 8.480e-32 Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = 0
Query: 33 RFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTV-LAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVE 156
RF+IELEFVQCL+ P YL+C L L S +V LA NRYF++PAF+ +++YL YWK+PEYA+++ YPHCL FLD++ + E FR+ +A + F VH QQF+HW+ F R E
Sbjct: 12 RFQIELEFVQCLASPAYLNCR----LSKSAMLLVWLLYSTSVDLATNRYFENPAFMNYIKYLEYWKKPEYAQYIVYPHCLAFLDLI---QTERFRQMIARDDFMTLVHSQQFYHWRTFLNNRMTE 129
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: UPI001CFBBC9A (mediator of RNA polymerase II transcription subunit 31-like n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFBBC9A) HSP 1 Score: 122 bits (305), Expect = 2.100e-31 Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 0
Query: 33 RFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVEPMATPAPE 164
RF +ELEFVQCL+ P Y+HC +L P SL ++ QNRYF+D AF+ +L+YL YW++PEY KF+ YPHCL FL++L +N FR +A G ++ H+QQFF W+++ R + P PE
Sbjct: 30 RFLLELEFVQCLANPTYIHC----ILAPNRNSLVEES-------QNRYFEDEAFIGYLKYLQYWQQPEYIKFIMYPHCLFFLELL---QNANFRNSMAHPGSKELAHRQQFFFWKNYRNNRLKHILPRPLPE 147
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE) HSP 1 Score: 118 bits (295), Expect = 6.410e-31 Identity = 65/132 (49.24%), Postives = 76/132 (57.58%), Query Frame = 0
Query: 32 TRFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVEPMATPAP 163
TRFE+ELE + CL+ P YLH LAQ+ Y DD AF+ FL YL Y+KRPEYAKF+TYPH L LD+L + N FRKE+A FRD+VHQQQF HWQ T P A AP
Sbjct: 6 TRFEMELELMNCLASPEYLH----------------------YLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLIN--NPPFRKEIAHVSFRDFVHQQQFLHWQFGKTAAPPRPPAASAP 113
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A6P6VXN5_COFAR (Mediator of RNA polymerase II transcription subunit 31 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6VXN5_COFAR) HSP 1 Score: 119 bits (299), Expect = 1.420e-30 Identity = 64/164 (39.02%), Postives = 89/164 (54.27%), Query Frame = 0
Query: 1 MATENDADTSIRPPQAPVDSAGALSTGVSARTRFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVEPMATPAPE 164
MA+ NDA+ S +PP +P R RF +ELEFVQCL+ P Y+H LAQNRYF+D AF+ +L+YL YW+ PEY KF+ YPHCL FL++L +N FR +A ++ H+QQF+ W+++ R + P PE
Sbjct: 1 MASNNDANDSEKPPSSP--KKNVYKDPDDGRQRFLLELEFVQCLANPTYIH----------------------YLAQNRYFEDEAFIGYLKYLQYWQLPEYIKFIMYPHCLFFLELL---QNPNFRNAMAHPANKELAHRQQFYFWKNYRNNRLKHILPRPLPE 137
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: UPI00053FC38E (mediator of RNA polymerase II transcription subunit 31 isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FC38E) HSP 1 Score: 119 bits (298), Expect = 1.580e-30 Identity = 64/164 (39.02%), Postives = 88/164 (53.66%), Query Frame = 0
Query: 1 MATENDADTSIRPPQAPVDSAGALSTGVSARTRFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVEPMATPAPE 164
MA+ NDAD + P + R RF +ELEFVQCL+ P Y+H LAQNRYFDD AF+ +L+YL YW++PEY KF+ YPHCL FL++L +N FR +A G ++ H+QQF+ W+++ R + P PE
Sbjct: 1 MASSNDADDTSNSPSL---TQNVYKDPDDGRQRFLLELEFVQCLANPTYIH----------------------YLAQNRYFDDEAFIGYLKYLQYWQQPEYIKFIMYPHCLFFLELL---QNANFRNAMAHPGSKELAHRQQFYFWKNYRNNRLKHILPRPLPE 136
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Match: A0A1Q3C042_CEPFO (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C042_CEPFO) HSP 1 Score: 118 bits (296), Expect = 3.600e-30 Identity = 65/164 (39.63%), Postives = 90/164 (54.88%), Query Frame = 0
Query: 1 MATENDADTSIRPPQAPVDSAGALSTGVSARTRFEIELEFVQCLSRPNYLHCGKKYVLLPPCTSLPRQTLSKTVLAQNRYFDDPAFLAFLRYLSYWKRPEYAKFVTYPHCLGFLDILNDSENELFRKELAMEGFRDYVHQQQFFHWQHFHTTRYVEPMATPAPE 164
MA+ ++D S P +P + G R RF +ELEFVQCL+ P Y+H LAQNRYF+D AF+ +L+YL YW+RPEY KF+ YPHCL FL++L +N FR +A G ++ H+QQFF W+++ R + P PE
Sbjct: 1 MASAKESDDSPNTPSSPNNVFKDPDDG---RQRFLLELEFVQCLANPTYIH----------------------YLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLYFLELL---QNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPLPE 136 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1350.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig1350.3.1 ID=prot_P-wetherbeei_contig1350.3.1|Name=mRNA_P-wetherbeei_contig1350.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bpback to top |