mRNA_P-wetherbeei_contig13466.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7C4Y0T7_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4Y0T7_9HYPH) HSP 1 Score: 391 bits (1005), Expect = 4.020e-133 Identity = 185/282 (65.60%), Postives = 230/282 (81.56%), Query Frame = 1
Query: 4 GEAGARIAVKPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
GE G+ + +PAD VIVL+GG+EM SR+G+LLA +NAD++AGEPGVLHA+P GA+L +TR S +++DG +DD +S +H +ES+ +L+D +G RVASL+H QPF QMTLD ICRCAEAMTRR AGEEVIRYA GDYFYV+E GEAEVWRPDP TG KVATL PGA+FGEEALLRGG RNATVR+TKPGS+L LAV +F++L+ASHF+HEI DAA ++ARRQA L+DCRYEDEH+ WRIPGS+ +PLD +R A LDK + Y+VYC +G+RSRA
Sbjct: 83 GETGSPVHARPADFVIVLEGGLEMRSRDGRLLATINADQAAGEPGVLHAIPQGARLQLTRPSHVVIMDGERVDDAMSRSHQHESVKTLDDGIGRRVASLVHAQPFAQMTLDHICRCAEAMTRREAAAGEEVIRYADRGDYFYVIESGEAEVWRPDPLTGQVSKVATLGPGATFGEEALLRGGFRNATVRMTKPGSLLRLAVGDFERLLASHFVHEIDADAAHALIARRQAELLDCRYEDEHETWRIPGSRLMPLDVIRREAKHLDKNRQYLVYCTSGRRSRA 364
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A833FTK5_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833FTK5_9HYPH) HSP 1 Score: 268 bits (685), Expect = 2.320e-85 Identity = 141/285 (49.47%), Postives = 188/285 (65.96%), Query Frame = 1
Query: 1 SGEAGARIAVKPADVVIVLDGGIEMTSREG-QLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGA-PVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
SG+ G I VK D+V+VL+GG+ MTS +G LA D A +P +L+ +P GA L +T KS LV+DG LD +S A +S+A+L+D++ RVA L+ + PF ++T + ICRCA AMT V AG +++ GD+FYV+EQG+AEVWR GA P VA L PGA FGEEALL+ RNATVR+T G +L LA +FD+L+ S + E+ + A L RR A LIDCRYE E ++WRIP S+ +PLD +R A LDK + Y+VYCRTG+RSRA
Sbjct: 33 SGKVGDTIKVKAGDLVVVLEGGLVMTSADGGDHLAAFVVDEKAKDPAILYTIPAGAHLELTHKSLYLVIDGDRLDAAMSGAQEAKSVATLDDAVRERVALLLKSAPFKELTFEHICRCAAAMTSIAVKAGTDIVTQGAPGDFFYVIEQGQAEVWRKGEEKGATPQLVAKLGPGAPFGEEALLQDDKRNATVRMTSDGRLLRLAKGDFDKLLKSQLVQEVGAEDASRKLGRRAADLIDCRYEAEWELWRIPNSRLMPLDDIRERARGLDKGRDYIVYCRTGRRSRA 317
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7C2RDA4_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2RDA4_9HYPH) HSP 1 Score: 240 bits (613), Expect = 1.480e-74 Identity = 128/284 (45.07%), Postives = 185/284 (65.14%), Query Frame = 1
Query: 1 SGEAGARIAVKPADVVIVLDGGIEMTSREGQL-LARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
+G AG + + D+V++L+GG+ M S +G +A + D A +P +L+ +P GA+L ++R S LVV+G LD +L+ +SLA+L++S+ RVA L+ +PF +++L+QI CAE M V+ GEE++R GDYFYV+E G AEV R GA V +A L PGA FGEEALL+G RNATVR+T G VL LA +F +L+ + EI P+ A+ + R A LIDCRYE+E ++ R+ G++ +PLDQ+R LD + Y+VYCRTG+RSRA
Sbjct: 33 TGAAGDPVDARQGDLVVLLEGGLAMGSDDGGAHVAAFSVDEGARDPAILYTIPAGARLQLSRPSVYLVVEGERLDAVLAGRQQEKSLATLDESVRERVAGLVRARPFERLSLEQIVACAEVMEAMEVEPGEEIVREGEPGDYFYVIETGSAEVVRAGADGGASV-LARLGPGAGFGEEALLKGEPRNATVRMTAAGRVLRLAKGDFQRLLERRLLEEIPPEEARRRVDLRGAALIDCRYEEEWELSRLRGARLVPLDQIRERLRGLDPRREYIVYCRTGRRSRA 315
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7C1YDT3_9GAMM (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A7C1YDT3_9GAMM) HSP 1 Score: 169 bits (427), Expect = 1.560e-46 Identity = 97/275 (35.27%), Postives = 152/275 (55.27%), Query Frame = 1
Query: 46 VIVLDGGI----EMTSREGQLLAR---VNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
++++DG + + T+ +GQ R + + GE VL A G + ++++G ++D L + L R + F Q+ L+ I + M+ V AG V+ +GD +YV+E G AEVWR DP T VA PG +FGEEALL+ LRNATV++T PGS+L L ++FD+L+ F+ E+ D A++M+ + +A +DCRYE E++ RIP + IPLD++R +LD +Y+VYCR+G+RS+A
Sbjct: 51 LVIVDGELGCERQYTNADGQQEFRRRVLKGCEAEGEIAVLTAAGRGCTASALTPLRYMLIEGDLIDVFLGWNQQVSRAIVNDPELTHRAKLVKQVNVFHQLPLENIQAAFKRMSTIEVGAGNTVVNEGDSGDCYYVIETGTAEVWRTDPFTDETKLVAEFGPGDAFGEEALLQNALRNATVKMTSPGSLLVLQKSDFDELVQPKFLQEVEADVARDMVDQGKAKWLDCRYEMEYEESRIPNAPLIPLDRIRENTHKLDSDSTYIVYCRSGRRSKA 325
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A3B1C4H2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1C4H2_9ZZZZ) HSP 1 Score: 162 bits (409), Expect = 6.340e-44 Identity = 109/283 (38.52%), Postives = 153/283 (54.06%), Query Frame = 1
Query: 1 SGEAGARIAVKPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALV--VDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRS 843
SGE K D + VL+G +E++S++G AD + P L GA +T T D ++ D ++LD +L+ E SR+ L H F + LD + + +AM +V GEEVIR G+ FYV+ +G AEVWR + KVA L+ G +FGEEAL+ G RNATVR+ + G +L L ++D+L S I E+ P A+ M A L+D RYE+E + IPG+ IPL +LR EL+ +KSYVVYCR+GKRS
Sbjct: 46 SGEILTLSGAKKDDYLYVLEGSVELSSKDGFHQKLAPADTTP-MPFSLQ----GAVITATAVGDTILCHADSAMLDHLLAWDSLTAVRPIEEPGAHSRMDQLKHCLAFRNLPLDCVEKAFKAMRSLSVKKGEEVIRAKEAGEAFYVITKGRAEVWRANLYEKEQKKVAELAIGDAFGEEALITSGYRNATVRMVEDGCLLALNKADYDRLFRSRMIKEVDPPVAKAM-ADGGHELLDVRYEEEFEEKYIPGAILIPLPELRKRLGELEPSKSYVVYCRSGKRS 322
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: UPI0019F7F694 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F7F694) HSP 1 Score: 160 bits (405), Expect = 8.410e-41 Identity = 102/274 (37.23%), Postives = 156/274 (56.93%), Query Frame = 1
Query: 46 VIVLDGGIEM----TSREG--QLLARV-NADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSR 846
++++ G IE+ T+ +G + ARV A AG V+ A P G +L S L +D +D+I+ + S A E LGS + Q+ +Q+ + E+M +DAGE V+R G+ ++++E+G+AEVWR D T +ATL PG +FGEEALL+GG RNATVR+ G +L L+ +FD+L+ EI A+ +L +A L+DCRY+ E RI G++ +PLDQ+R+ + ++D Y+VYCR G+RSR
Sbjct: 609 LVLISGAIEVRRSWTTLDGIEKNSARVVEAGAGAGPVAVIGASPRGMELRAVGDSRYLTLDAGAIDEIVGRRLASSSEAVAE-GLGS-------SGIMRQLPPEQLQKVMESMVPVEIDAGEPVVRQGDPGEEYFLIEEGDAEVWREDAFTQQSACLATLGPGDAFGEEALLQGGYRNATVRMVTHGRLLKLSKGDFDRLVKEPLAPEIAAAEAKALLDEGKAVLLDCRYDMEIGENRITGARSLPLDQIRSLSHQIDLGSRYLVYCRNGQRSR 874
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A432F0L3_9AQUI (Uncharacterized protein n=1 Tax=Aquificaceae bacterium TaxID=2053503 RepID=A0A432F0L3_9AQUI) HSP 1 Score: 144 bits (362), Expect = 1.300e-35 Identity = 93/285 (32.63%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 13 GARIAVKPA---DVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLH---AVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
G ++PA D + V +G ++ + V+A + +P + + V + T+ +L+ D L DIL ES S+E R+ L T+ F + ++ + A+ TV G+E+I+ D F++L +GEAEVWR + P VA L G +FGEEAL+ GG RNA++ +T G +L L+ +FD+L+++ + ++P+ AQ M+ + A +ID RYE+E+Q IPGS IPL LR+ LD+ K Y++ C G R++A
Sbjct: 41 GETFHIQPASEEDYLFVTEGSAYFLGKQNNQ-SNVSASQIGAQPILFNDAITVSTDSSATVCHVDTSLINDYLSLKDILDSTVKGESDFSVE-----RLMFLKSTKVFRLLPINVVDEAAKRCEEITVSKGDEIIKQDSRADAFFILLEGEAEVWREELDDDEPQMVALLGSGDTFGEEALIIGGARNASIIMTTDGKLLKLSKADFDELVSTPALRSVSPEVAQTMV-EKGAEIIDVRYEEEYQESFIPGSVLIPLPDLRSHIAGLDENKEYLILCGVGLRAQA 318
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A484HEV4_9DELT (cGMP-dependent protein kinase type I n=1 Tax=uncultured Desulfobacteraceae bacterium TaxID=218296 RepID=A0A484HEV4_9DELT) HSP 1 Score: 139 bits (350), Expect = 2.280e-35 Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 1
Query: 202 VDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
VD LDD++ + + L SR+ L + F+ ++ +C A+ R V AGEEVI+ GD FY+++ G AEVW + KV L G FGE+AL+ G RNATV++ G +L L ++ +LI+S + E+ P+ A+ ++ L+D R+E+E++ IPGS IPL QLR ELD+ K Y+VYCR+GKRS A
Sbjct: 97 VDEEKLDDLIFWSELKRVIDEKGMGLNSRIDKLSESPVFSGLSPRAVCETVNALKVREVSAGEEVIKQFDPGDVFYIIDSGVAEVWVAEFVGDESKKVCDLRAGHGFGEDALVSGKPRNATVKMKTGGKLLTLEKDDYIRLISSASLFEVGPEEAREKTSQG-VELLDIRFEEENEEAHIPGSILIPLHQLRQRFGELDQGKDYIVYCRSGKRSAA 311
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7V5PG37_9GAMM (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5PG37_9GAMM) HSP 1 Score: 139 bits (350), Expect = 2.530e-35 Identity = 88/273 (32.23%), Postives = 138/273 (50.55%), Query Frame = 1
Query: 46 VIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSR-----VASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
V VLDG +E+ +G+++ R+ + H P +++ L +D +LD +L+ T +E+ G + L+ T F ++ I M AG+E++R GDYFY+L +G EV R + G +++ATL PG SFGEEAL+ G RNATV + PG ++ L+ +FD L+ + I + A +AR A +D R E++ I GS+ +PL LR +LD +SY++YC TG+RS A
Sbjct: 50 VYVLDGTVELVDDQGKVVKRIEGGTGEARFPLAHVKPRTLTARTASEAEILRIDSDMLDLMLTWDQTGSY--QVEELQGDSNPDDWMTRLLQTPAFHRIPPANIQALFLRMEEMPAQAGQEIVRQGEEGDYFYILVEGRCEVVRS--QGGRAIRLATLGPGDSFGEEALISGTERNATVTMKTPGRLMRLSKEDFDALLKEPMMQRIGYEEAVVKVAREGARFLDVRLPAEYRQGHIRGSENVPLIILRTRVDDLDPNRSYILYCDTGRRSSA 318
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: UPI00036A70E6 (cyclic nucleotide-binding domain-containing protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI00036A70E6) HSP 1 Score: 138 bits (348), Expect = 4.560e-35 Identity = 89/273 (32.60%), Postives = 139/273 (50.92%), Query Frame = 1
Query: 31 KPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNE-SLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALE-LDKTKSYVVYCRTGKRS 843
KP V VL G +E+ + +G L D + ++ G L + L+ D LD + S A + S ++L R+ S++HT F Q+ L+ + + M R V AGE ++ GD FY++ G AEVW+ DP G V T+ G +FG+EAL+ GG RNATV++ + G +L LA +F +L++ I EI P + M+ ++D RY +E + IP + +PL +LR A LD+ ++ C +GKRS
Sbjct: 53 KPGQRVTVLSGTVELDAEDGPL------DLAGTRERMVQTGADGTSLRALENAVVLLADAEFLDTLASWAELAAYAKQSGGEALVQRLLSVMHTNAFKQLPLEHVTQALRQMVSRRVSAGEVIVNQGERGDAFYLIWSGRAEVWQEDPFEGDLKLVDTMGHGDTFGDEALVTGGTRNATVKMIEDGELLVLAEQDFRELMSRPMIEEIPPGSVPGMIDDDWK-VVDVRYMEEFEDGHIPEAIHLPLHELRQRADGMLDRNDRFITVCLSGKRS 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13466.1.1 >prot_P-wetherbeei_contig13466.1.1 ID=prot_P-wetherbeei_contig13466.1.1|Name=mRNA_P-wetherbeei_contig13466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp SGEAGARIAVKPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAback to top mRNA from alignment at P-wetherbeei_contig13466:988..1836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13466.1.1 ID=mRNA_P-wetherbeei_contig13466.1.1|Name=mRNA_P-wetherbeei_contig13466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig13466:988..1836+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13466:988..1836+ >mRNA_P-wetherbeei_contig13466.1.1 ID=mRNA_P-wetherbeei_contig13466.1.1|Name=mRNA_P-wetherbeei_contig13466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig13466:988..1836+ (Phaeothamnion wetherbeei SAG_119_79)back to top |