mRNA_P-wetherbeei_contig13466.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13466.1.1
Unique NamemRNA_P-wetherbeei_contig13466.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7C4Y0T7_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4Y0T7_9HYPH)

HSP 1 Score: 391 bits (1005), Expect = 4.020e-133
Identity = 185/282 (65.60%), Postives = 230/282 (81.56%), Query Frame = 1
Query:    4 GEAGARIAVKPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            GE G+ +  +PAD VIVL+GG+EM SR+G+LLA +NAD++AGEPGVLHA+P GA+L +TR S  +++DG  +DD +S +H +ES+ +L+D +G RVASL+H QPF QMTLD ICRCAEAMTRR   AGEEVIRYA  GDYFYV+E GEAEVWRPDP TG   KVATL PGA+FGEEALLRGG RNATVR+TKPGS+L LAV +F++L+ASHF+HEI  DAA  ++ARRQA L+DCRYEDEH+ WRIPGS+ +PLD +R  A  LDK + Y+VYC +G+RSRA
Sbjct:   83 GETGSPVHARPADFVIVLEGGLEMRSRDGRLLATINADQAAGEPGVLHAIPQGARLQLTRPSHVVIMDGERVDDAMSRSHQHESVKTLDDGIGRRVASLVHAQPFAQMTLDHICRCAEAMTRREAAAGEEVIRYADRGDYFYVIESGEAEVWRPDPLTGQVSKVATLGPGATFGEEALLRGGFRNATVRMTKPGSLLRLAVGDFERLLASHFVHEIDADAAHALIARRQAELLDCRYEDEHETWRIPGSRLMPLDVIRREAKHLDKNRQYLVYCTSGRRSRA 364          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A833FTK5_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833FTK5_9HYPH)

HSP 1 Score: 268 bits (685), Expect = 2.320e-85
Identity = 141/285 (49.47%), Postives = 188/285 (65.96%), Query Frame = 1
Query:    1 SGEAGARIAVKPADVVIVLDGGIEMTSREG-QLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGA-PVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            SG+ G  I VK  D+V+VL+GG+ MTS +G   LA    D  A +P +L+ +P GA L +T KS  LV+DG  LD  +S A   +S+A+L+D++  RVA L+ + PF ++T + ICRCA AMT   V AG +++     GD+FYV+EQG+AEVWR     GA P  VA L PGA FGEEALL+   RNATVR+T  G +L LA  +FD+L+ S  + E+  + A   L RR A LIDCRYE E ++WRIP S+ +PLD +R  A  LDK + Y+VYCRTG+RSRA
Sbjct:   33 SGKVGDTIKVKAGDLVVVLEGGLVMTSADGGDHLAAFVVDEKAKDPAILYTIPAGAHLELTHKSLYLVIDGDRLDAAMSGAQEAKSVATLDDAVRERVALLLKSAPFKELTFEHICRCAAAMTSIAVKAGTDIVTQGAPGDFFYVIEQGQAEVWRKGEEKGATPQLVAKLGPGAPFGEEALLQDDKRNATVRMTSDGRLLRLAKGDFDKLLKSQLVQEVGAEDASRKLGRRAADLIDCRYEAEWELWRIPNSRLMPLDDIRERARGLDKGRDYIVYCRTGRRSRA 317          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7C2RDA4_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2RDA4_9HYPH)

HSP 1 Score: 240 bits (613), Expect = 1.480e-74
Identity = 128/284 (45.07%), Postives = 185/284 (65.14%), Query Frame = 1
Query:    1 SGEAGARIAVKPADVVIVLDGGIEMTSREGQL-LARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            +G AG  +  +  D+V++L+GG+ M S +G   +A  + D  A +P +L+ +P GA+L ++R S  LVV+G  LD +L+     +SLA+L++S+  RVA L+  +PF +++L+QI  CAE M    V+ GEE++R    GDYFYV+E G AEV R     GA V +A L PGA FGEEALL+G  RNATVR+T  G VL LA  +F +L+    + EI P+ A+  +  R A LIDCRYE+E ++ R+ G++ +PLDQ+R     LD  + Y+VYCRTG+RSRA
Sbjct:   33 TGAAGDPVDARQGDLVVLLEGGLAMGSDDGGAHVAAFSVDEGARDPAILYTIPAGARLQLSRPSVYLVVEGERLDAVLAGRQQEKSLATLDESVRERVAGLVRARPFERLSLEQIVACAEVMEAMEVEPGEEIVREGEPGDYFYVIETGSAEVVRAGADGGASV-LARLGPGAGFGEEALLKGEPRNATVRMTAAGRVLRLAKGDFQRLLERRLLEEIPPEEARRRVDLRGAALIDCRYEEEWELSRLRGARLVPLDQIRERLRGLDPRREYIVYCRTGRRSRA 315          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7C1YDT3_9GAMM (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A7C1YDT3_9GAMM)

HSP 1 Score: 169 bits (427), Expect = 1.560e-46
Identity = 97/275 (35.27%), Postives = 152/275 (55.27%), Query Frame = 1
Query:   46 VIVLDGGI----EMTSREGQLLAR---VNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            ++++DG +    + T+ +GQ   R   +    + GE  VL A   G   +       ++++G ++D  L            +  L  R   +     F Q+ L+ I    + M+   V AG  V+    +GD +YV+E G AEVWR DP T     VA   PG +FGEEALL+  LRNATV++T PGS+L L  ++FD+L+   F+ E+  D A++M+ + +A  +DCRYE E++  RIP +  IPLD++R    +LD   +Y+VYCR+G+RS+A
Sbjct:   51 LVIVDGELGCERQYTNADGQQEFRRRVLKGCEAEGEIAVLTAAGRGCTASALTPLRYMLIEGDLIDVFLGWNQQVSRAIVNDPELTHRAKLVKQVNVFHQLPLENIQAAFKRMSTIEVGAGNTVVNEGDSGDCYYVIETGTAEVWRTDPFTDETKLVAEFGPGDAFGEEALLQNALRNATVKMTSPGSLLVLQKSDFDELVQPKFLQEVEADVARDMVDQGKAKWLDCRYEMEYEESRIPNAPLIPLDRIRENTHKLDSDSTYIVYCRSGRRSKA 325          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A3B1C4H2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1C4H2_9ZZZZ)

HSP 1 Score: 162 bits (409), Expect = 6.340e-44
Identity = 109/283 (38.52%), Postives = 153/283 (54.06%), Query Frame = 1
Query:    1 SGEAGARIAVKPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALV--VDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRS 843
            SGE       K  D + VL+G +E++S++G       AD +   P  L     GA +T T   D ++   D ++LD +L+           E    SR+  L H   F  + LD + +  +AM   +V  GEEVIR    G+ FYV+ +G AEVWR +       KVA L+ G +FGEEAL+  G RNATVR+ + G +L L   ++D+L  S  I E+ P  A+ M A     L+D RYE+E +   IPG+  IPL +LR    EL+ +KSYVVYCR+GKRS
Sbjct:   46 SGEILTLSGAKKDDYLYVLEGSVELSSKDGFHQKLAPADTTP-MPFSLQ----GAVITATAVGDTILCHADSAMLDHLLAWDSLTAVRPIEEPGAHSRMDQLKHCLAFRNLPLDCVEKAFKAMRSLSVKKGEEVIRAKEAGEAFYVITKGRAEVWRANLYEKEQKKVAELAIGDAFGEEALITSGYRNATVRMVEDGCLLALNKADYDRLFRSRMIKEVDPPVAKAM-ADGGHELLDVRYEEEFEEKYIPGAILIPLPELRKRLGELEPSKSYVVYCRSGKRS 322          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: UPI0019F7F694 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F7F694)

HSP 1 Score: 160 bits (405), Expect = 8.410e-41
Identity = 102/274 (37.23%), Postives = 156/274 (56.93%), Query Frame = 1
Query:   46 VIVLDGGIEM----TSREG--QLLARV-NADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSR 846
            ++++ G IE+    T+ +G  +  ARV  A   AG   V+ A P G +L     S  L +D   +D+I+     + S A  E  LGS       +    Q+  +Q+ +  E+M    +DAGE V+R    G+ ++++E+G+AEVWR D  T     +ATL PG +FGEEALL+GG RNATVR+   G +L L+  +FD+L+      EI    A+ +L   +A L+DCRY+ E    RI G++ +PLDQ+R+ + ++D    Y+VYCR G+RSR
Sbjct:  609 LVLISGAIEVRRSWTTLDGIEKNSARVVEAGAGAGPVAVIGASPRGMELRAVGDSRYLTLDAGAIDEIVGRRLASSSEAVAE-GLGS-------SGIMRQLPPEQLQKVMESMVPVEIDAGEPVVRQGDPGEEYFLIEEGDAEVWREDAFTQQSACLATLGPGDAFGEEALLQGGYRNATVRMVTHGRLLKLSKGDFDRLVKEPLAPEIAAAEAKALLDEGKAVLLDCRYDMEIGENRITGARSLPLDQIRSLSHQIDLGSRYLVYCRNGQRSR 874          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A432F0L3_9AQUI (Uncharacterized protein n=1 Tax=Aquificaceae bacterium TaxID=2053503 RepID=A0A432F0L3_9AQUI)

HSP 1 Score: 144 bits (362), Expect = 1.300e-35
Identity = 93/285 (32.63%), Postives = 151/285 (52.98%), Query Frame = 1
Query:   13 GARIAVKPA---DVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLH---AVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            G    ++PA   D + V +G      ++    + V+A +   +P + +    V   +  T+     +L+ D   L DIL      ES  S+E     R+  L  T+ F  + ++ +   A+     TV  G+E+I+     D F++L +GEAEVWR +     P  VA L  G +FGEEAL+ GG RNA++ +T  G +L L+  +FD+L+++  +  ++P+ AQ M+  + A +ID RYE+E+Q   IPGS  IPL  LR+    LD+ K Y++ C  G R++A
Sbjct:   41 GETFHIQPASEEDYLFVTEGSAYFLGKQNNQ-SNVSASQIGAQPILFNDAITVSTDSSATVCHVDTSLINDYLSLKDILDSTVKGESDFSVE-----RLMFLKSTKVFRLLPINVVDEAAKRCEEITVSKGDEIIKQDSRADAFFILLEGEAEVWREELDDDEPQMVALLGSGDTFGEEALIIGGARNASIIMTTDGKLLKLSKADFDELVSTPALRSVSPEVAQTMV-EKGAEIIDVRYEEEYQESFIPGSVLIPLPDLRSHIAGLDENKEYLILCGVGLRAQA 318          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A484HEV4_9DELT (cGMP-dependent protein kinase type I n=1 Tax=uncultured Desulfobacteraceae bacterium TaxID=218296 RepID=A0A484HEV4_9DELT)

HSP 1 Score: 139 bits (350), Expect = 2.280e-35
Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 1
Query:  202 VDGSVLDDILSHAHTNESLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            VD   LDD++  +     +      L SR+  L  +  F+ ++   +C    A+  R V AGEEVI+    GD FY+++ G AEVW  +       KV  L  G  FGE+AL+ G  RNATV++   G +L L   ++ +LI+S  + E+ P+ A+   ++    L+D R+E+E++   IPGS  IPL QLR    ELD+ K Y+VYCR+GKRS A
Sbjct:   97 VDEEKLDDLIFWSELKRVIDEKGMGLNSRIDKLSESPVFSGLSPRAVCETVNALKVREVSAGEEVIKQFDPGDVFYIIDSGVAEVWVAEFVGDESKKVCDLRAGHGFGEDALVSGKPRNATVKMKTGGKLLTLEKDDYIRLISSASLFEVGPEEAREKTSQG-VELLDIRFEEENEEAHIPGSILIPLHQLRQRFGELDQGKDYIVYCRSGKRSAA 311          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: A0A7V5PG37_9GAMM (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5PG37_9GAMM)

HSP 1 Score: 139 bits (350), Expect = 2.530e-35
Identity = 88/273 (32.23%), Postives = 138/273 (50.55%), Query Frame = 1
Query:   46 VIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSR-----VASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA 849
            V VLDG +E+   +G+++ R+          + H  P         +++ L +D  +LD +L+   T      +E+  G       +  L+ T  F ++    I      M      AG+E++R    GDYFY+L +G  EV R   + G  +++ATL PG SFGEEAL+ G  RNATV +  PG ++ L+  +FD L+    +  I  + A   +AR  A  +D R   E++   I GS+ +PL  LR    +LD  +SY++YC TG+RS A
Sbjct:   50 VYVLDGTVELVDDQGKVVKRIEGGTGEARFPLAHVKPRTLTARTASEAEILRIDSDMLDLMLTWDQTGSY--QVEELQGDSNPDDWMTRLLQTPAFHRIPPANIQALFLRMEEMPAQAGQEIVRQGEEGDYFYILVEGRCEVVRS--QGGRAIRLATLGPGDSFGEEALISGTERNATVTMKTPGRLMRLSKEDFDALLKEPMMQRIGYEEAVVKVAREGARFLDVRLPAEYRQGHIRGSENVPLIILRTRVDDLDPNRSYILYCDTGRRSSA 318          
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Match: UPI00036A70E6 (cyclic nucleotide-binding domain-containing protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI00036A70E6)

HSP 1 Score: 138 bits (348), Expect = 4.560e-35
Identity = 89/273 (32.60%), Postives = 139/273 (50.92%), Query Frame = 1
Query:   31 KPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHAVPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNE-SLASLEDSLGSRVASLIHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEAEVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGLAVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGSQPIPLDQLRAAALE-LDKTKSYVVYCRTGKRS 843
            KP   V VL G +E+ + +G L      D +     ++     G  L     +  L+ D   LD + S A     +  S  ++L  R+ S++HT  F Q+ L+ + +    M  R V AGE ++     GD FY++  G AEVW+ DP  G    V T+  G +FG+EAL+ GG RNATV++ + G +L LA  +F +L++   I EI P +   M+      ++D RY +E +   IP +  +PL +LR  A   LD+   ++  C +GKRS
Sbjct:   53 KPGQRVTVLSGTVELDAEDGPL------DLAGTRERMVQTGADGTSLRALENAVVLLADAEFLDTLASWAELAAYAKQSGGEALVQRLLSVMHTNAFKQLPLEHVTQALRQMVSRRVSAGEVIVNQGERGDAFYLIWSGRAEVWQEDPFEGDLKLVDTMGHGDTFGDEALVTGGTRNATVKMIEDGELLVLAEQDFRELMSRPMIEEIPPGSVPGMIDDDWK-VVDVRYMEEFEDGHIPEAIHLPLHELRQRADGMLDRNDRFITVCLSGKRS 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13466.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4Y0T7_9HYPH4.020e-13365.60Cyclic nucleotide-binding domain-containing protei... [more]
A0A833FTK5_9HYPH2.320e-8549.47Cyclic nucleotide-binding domain-containing protei... [more]
A0A7C2RDA4_9HYPH1.480e-7445.07Cyclic nucleotide-binding domain-containing protei... [more]
A0A7C1YDT3_9GAMM1.560e-4635.27Cyclic nucleotide-binding domain-containing protei... [more]
A0A3B1C4H2_9ZZZZ6.340e-4438.52Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
UPI0019F7F6948.410e-4137.23Cyclic nucleotide-binding domain-containing protei... [more]
A0A432F0L3_9AQUI1.300e-3532.63Uncharacterized protein n=1 Tax=Aquificaceae bacte... [more]
A0A484HEV4_9DELT2.280e-3537.96cGMP-dependent protein kinase type I n=1 Tax=uncul... [more]
A0A7V5PG37_9GAMM2.530e-3532.23Cyclic nucleotide-binding domain-containing protei... [more]
UPI00036A70E64.560e-3532.60cyclic nucleotide-binding domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13466contigP-wetherbeei_contig13466:988..1836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog765911.Thivi_3611
PFAMsRhodanese,cNMP_binding
Model size849
Max annot lvl135613|Chromatiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.98e-38
EggNOG OGsCOG0607@1|root,COG2905@1|root,COG0607@2|Bacteria,COG2905@2|Bacteria,1R9Q1@1224|Proteobacteria,1RSKD@1236|Gammaproteobacteria,1WWD6@135613|Chromatiales
Descriptioncyclic nucleotide-binding
Cds size849
COG categoryPT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185986.6542628-CDS-P-wetherbeei_contig13466:987..18361683185986.6542628-CDS-P-wetherbeei_contig13466:987..1836Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13466 988..1836 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13466.1.1prot_P-wetherbeei_contig13466.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13466 988..1836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13466.1.1

>prot_P-wetherbeei_contig13466.1.1 ID=prot_P-wetherbeei_contig13466.1.1|Name=mRNA_P-wetherbeei_contig13466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
SGEAGARIAVKPADVVIVLDGGIEMTSREGQLLARVNADRSAGEPGVLHA
VPPGAKLTMTRKSDALVVDGSVLDDILSHAHTNESLASLEDSLGSRVASL
IHTQPFTQMTLDQICRCAEAMTRRTVDAGEEVIRYAGTGDYFYVLEQGEA
EVWRPDPRTGAPVKVATLSPGASFGEEALLRGGLRNATVRITKPGSVLGL
AVTEFDQLIASHFIHEITPDAAQNMLARRQAHLIDCRYEDEHQVWRIPGS
QPIPLDQLRAAALELDKTKSYVVYCRTGKRSRA
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mRNA from alignment at P-wetherbeei_contig13466:988..1836+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13466.1.1 ID=mRNA_P-wetherbeei_contig13466.1.1|Name=mRNA_P-wetherbeei_contig13466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig13466:988..1836+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGGCGAGGCGGGCGCGCGTATCGCCGTCAAGCCGGCCGATGTCGTGAT CGTGCTCGACGGCGGCATCGAAATGACGAGCCGCGAAGGCCAGCTTCTGG CTCGCGTCAACGCCGACCGCTCGGCCGGCGAGCCCGGCGTCCTTCACGCG GTCCCTCCCGGCGCCAAGCTGACCATGACCCGCAAGAGCGATGCCCTCGT CGTCGACGGCAGCGTGCTCGATGACATCCTGAGCCACGCCCACACCAACG AAAGCCTCGCCTCGCTGGAGGACAGCCTCGGCAGCCGCGTCGCAAGCCTG ATCCACACCCAGCCCTTCACGCAGATGACCCTCGACCAGATCTGCCGCTG CGCCGAAGCGATGACGAGGCGCACGGTCGATGCCGGCGAGGAGGTCATCC GCTACGCCGGTACCGGCGACTATTTCTACGTCCTCGAGCAGGGCGAGGCC GAAGTCTGGCGTCCCGATCCGCGCACCGGCGCTCCCGTCAAGGTCGCGAC GCTGTCGCCCGGCGCCAGTTTCGGCGAAGAAGCCCTGCTGCGCGGCGGCT TGCGCAACGCGACGGTCCGCATCACCAAGCCCGGCTCTGTTCTCGGCCTC GCGGTGACGGAATTCGACCAGCTCATCGCCAGCCACTTCATCCACGAGAT CACGCCCGACGCCGCCCAGAACATGCTGGCCCGCCGGCAGGCCCACCTGA TCGATTGCCGCTACGAGGACGAGCATCAGGTCTGGCGCATTCCCGGCAGC CAGCCGATCCCGCTCGACCAGTTGCGCGCGGCCGCCCTCGAACTCGACAA GACGAAGAGCTACGTCGTCTATTGCCGCACCGGCAAGCGCAGCCGCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13466:988..1836+

>mRNA_P-wetherbeei_contig13466.1.1 ID=mRNA_P-wetherbeei_contig13466.1.1|Name=mRNA_P-wetherbeei_contig13466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig13466:988..1836+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGGCGAGGCGGGCGCGCGTATCGCCGTCAAGCCGGCCGATGTCGTGAT
CGTGCTCGACGGCGGCATCGAAATGACGAGCCGCGAAGGCCAGCTTCTGG
CTCGCGTCAACGCCGACCGCTCGGCCGGCGAGCCCGGCGTCCTTCACGCG
GTCCCTCCCGGCGCCAAGCTGACCATGACCCGCAAGAGCGATGCCCTCGT
CGTCGACGGCAGCGTGCTCGATGACATCCTGAGCCACGCCCACACCAACG
AAAGCCTCGCCTCGCTGGAGGACAGCCTCGGCAGCCGCGTCGCAAGCCTG
ATCCACACCCAGCCCTTCACGCAGATGACCCTCGACCAGATCTGCCGCTG
CGCCGAAGCGATGACGAGGCGCACGGTCGATGCCGGCGAGGAGGTCATCC
GCTACGCCGGTACCGGCGACTATTTCTACGTCCTCGAGCAGGGCGAGGCC
GAAGTCTGGCGTCCCGATCCGCGCACCGGCGCTCCCGTCAAGGTCGCGAC
GCTGTCGCCCGGCGCCAGTTTCGGCGAAGAAGCCCTGCTGCGCGGCGGCT
TGCGCAACGCGACGGTCCGCATCACCAAGCCCGGCTCTGTTCTCGGCCTC
GCGGTGACGGAATTCGACCAGCTCATCGCCAGCCACTTCATCCACGAGAT
CACGCCCGACGCCGCCCAGAACATGCTGGCCCGCCGGCAGGCCCACCTGA
TCGATTGCCGCTACGAGGACGAGCATCAGGTCTGGCGCATTCCCGGCAGC
CAGCCGATCCCGCTCGACCAGTTGCGCGCGGCCGCCCTCGAACTCGACAA
GACGAAGAGCTACGTCGTCTATTGCCGCACCGGCAAGCGCAGCCGCGCG
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