mRNA_P-wetherbeei_contig13356.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: UPI001D0C9A56 (YHS domain-containing protein n=1 Tax=Roseibaca sp. Y0-43 TaxID=2816854 RepID=UPI001D0C9A56) HSP 1 Score: 170 bits (430), Expect = 8.870e-52 Identity = 81/139 (58.27%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 7 KRRLVLALLLAAAAFPVRAEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWPG 423
+R L++A LLA A P+ A+ A ++GYDPVAYF EG RRG +Y DW G RW F S NRDAFAADPA YAP+YGG CA+ +A+GY AP+ PEAW IVDG+LYLN +R +QR W D+PG+IA+A+ANWPG
Sbjct: 4 RRALLVATLLALPATPLLAQAAPA-----LDGYDPVAYFTEGAPRRGDASYSLDWNGQRWHFASAANRDAFAADPAAYAPQYGGNCAWAVAEGYLAPVDPEAWVIVDGKLYLNANRRIQRRWERDIPGFIARADANWPG 137
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: UPI001BAB24EC (YHS domain protein n=1 Tax=Roseomonas eburnea TaxID=1346889 RepID=UPI001BAB24EC) HSP 1 Score: 170 bits (431), Expect = 1.000e-51 Identity = 78/127 (61.42%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 52 PVRAEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWPGQST 432
P RA VNA G+A+ G D VAYF EGR +G + WRGA W F S NRD FAA+P RYAP YGG+CAY +++GY API P AW IVDGRL+LNY RSVQR W D+PG IA+A+ANWPG ST
Sbjct: 29 PARAAQVNAEDGVAVRGTDVVAYFTEGRPTQGRAEFTRMWRGAAWRFASAANRDRFAAEPERYAPAYGGFCAYAVSEGYTAPIDPAAWRIVDGRLFLNYDRSVQRRWERDIPGRIARADANWPGLST 155
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: UPI000E1B6D2F (YHS domain-containing protein n=1 Tax=Jannaschia formosa TaxID=2259592 RepID=UPI000E1B6D2F) HSP 1 Score: 168 bits (425), Expect = 6.580e-51 Identity = 74/116 (63.79%), Postives = 88/116 (75.86%), Query Frame = 1
Query: 76 ARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWPG 423
A GG+AI+G DPVAYF EGR G A HDW GA W F + NR AFAADP YAP+YGG+CA+ +A+GY AP PEAW IVDG+LYLNYSR +QR W D+PG+IA+A+ANWPG
Sbjct: 30 AEGGVAIDGTDPVAYFTEGRPVPGDAAITHDWNGATWRFATEANRAAFAADPEAYAPQYGGFCAWAVAEGYTAPTTPEAWEIVDGKLYLNYSRRIQRRWERDIPGHIARADANWPG 145
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: A0A2Y9AZK5_9RHOB (Uncharacterized protein n=1 Tax=Jannaschia seohaensis TaxID=475081 RepID=A0A2Y9AZK5_9RHOB) HSP 1 Score: 167 bits (422), Expect = 1.940e-50 Identity = 80/132 (60.61%), Postives = 94/132 (71.21%), Query Frame = 1
Query: 34 LAAAAFP--VRAEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWPG 423
LAA A P A+ V A GG+AI+G DPVAYF EGR G A HDW GA W F + NR FAADP YAP+YGGYCA+ +A+GY A VPEAW IVDG+LYLNYSR +QR W D+PG I++A+ANWPG
Sbjct: 16 LAAVALPRVAAAQSVYAEGGVAIDGTDPVAYFTEGRPVAGDAAITHDWNGATWRFSTEANRADFAADPEAYAPQYGGYCAWAVAEGYTASTVPEAWEIVDGKLYLNYSRRIQRRWERDIPGNISRADANWPG 147
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: UPI001057CB43 (YHS domain-containing protein n=1 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI001057CB43) HSP 1 Score: 165 bits (417), Expect = 1.190e-49 Identity = 83/142 (58.45%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 1 RMKRRLVLALLL---AAAAFPVRAEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANW 417
R RR +L LLL A A P A GLAI G DPVAYF EGR G + HDWRGA WLF S NRDAFAA P RYAP YGG+CAY +++GY AP P AW IVDGRL+LNY RSVQRTW D+PG + + +ANW
Sbjct: 3 RPSRRRLLGLLLLPSATCAQPPAPAQTYAENGLAIRGTDPVAYFTEGRPVPGRAEFRHDWRGATWLFASAANRDAFAAAPDRYAPAYGGFCAYAVSEGYTAPTDPAAWRIVDGRLFLNYDRSVQRTWEGDIPGRVRRGDANW 144
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: A0A848ECG9_9PROT (YHS domain protein n=2 Tax=Roseomonas TaxID=125216 RepID=A0A848ECG9_9PROT) HSP 1 Score: 164 bits (416), Expect = 1.850e-49 Identity = 72/120 (60.00%), Postives = 91/120 (75.83%), Query Frame = 1
Query: 61 AEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWP 420
A VNA G+A+ G D VAYFAEGRA G+ A+ H WRGA W F S NRD FAADP RYAP YGG+CA+ +++GY API P+AW IVDGRL+LNY ++++R W D+PG +A+A+ANWP
Sbjct: 31 APAVNAEDGVAVRGTDVVAYFAEGRAVAGSPAFTHAWRGAIWRFASAANRDLFAADPGRYAPAYGGFCAFAVSEGYTAPIDPQAWRIVDGRLFLNYDQAIKRRWERDIPGRVARADANWP 150
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: UPI001EF2DCA2 (YHS domain protein n=1 Tax=Thalassobius sp. Cn5-15 TaxID=2917763 RepID=UPI001EF2DCA2) HSP 1 Score: 164 bits (416), Expect = 1.850e-49 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 58 RAEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWP 420
R + GG+A++G D VAYF EG+ G + HDW+GA W F S NRDAFAA+PA YAP++GGYCAY +++G AP VPEAW IVDG+LYLN+S+SVQ+ WL DVPG IAKAEANWP
Sbjct: 30 RTPEIYTEGGIAVDGSDVVAYFTEGKPVTGKPSITHDWKGATWQFASVENRDAFAANPAAYAPQFGGYCAYAVSKGATAPTVPEAWRIVDGKLYLNFSKSVQKVWLQDVPGNIAKAEANWP 150
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: A0A7C2UF56_9PROT (YHS domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UF56_9PROT) HSP 1 Score: 164 bits (414), Expect = 2.810e-49 Identity = 76/124 (61.29%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 49 FPVRAEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWP 420
F +AEI RGG AI G+DPVAYFAEGR +G + H WR A W F + NRDAF+A P +YAP+YGGYCAYG+A GY I P AWSIVDG+LYLNYS SV+ +W D+PGYI KA+A+WP
Sbjct: 19 FAQKAEIYADRGG-AIRGHDPVAYFAEGRPVKGRPEFSHRWRDATWYFATAANRDAFSAAPEKYAPQYGGYCAYGVANGYAVAIDPAAWSIVDGKLYLNYSLSVRESWKKDIPGYIRKADAHWP 141
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: A0A6B1HKW4_9PROT (YHS domain-containing protein n=5 Tax=Bacteria TaxID=2 RepID=A0A6B1HKW4_9PROT) HSP 1 Score: 163 bits (413), Expect = 5.460e-49 Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 70 VNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWPG 423
+ A GG+AI GYDPVAYF EG+ G + H W+ A W F S NRD F DP R+AP+YGGYCAYG+AQGY I + WS+VDG+LYLNY RSVQRTW D+PGYI KA NWPG
Sbjct: 36 IFAPGGMAIRGYDPVAYFTEGKPVAGKPEFTHVWKSATWYFSSAANRDKFRQDPERWAPQYGGYCAYGVAQGYAVKIEVDQWSVVDGKLYLNYDRSVQRTWKRDIPGYIRKANKNWPG 153
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Match: A0A5P8YZ17_9RHOB (Uncharacterized protein n=1 Tax=Roseivivax sp. THAF197b TaxID=2588299 RepID=A0A5P8YZ17_9RHOB) HSP 1 Score: 163 bits (413), Expect = 5.810e-49 Identity = 74/120 (61.67%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 61 AEIVNARGGLAIEGYDPVAYFAEGRARRGAVAYFHDWRGARWLFVSGTNRDAFAADPARYAPRYGGYCAYGMAQGYKAPIVPEAWSIVDGRLYLNYSRSVQRTWLADVPGYIAKAEANWP 420
A+ V GG+AI+G DPVAYF EGR GA HDWRGA W F NRDAFAADP YAP+YGGYCA+ +A+GY A VPEAW I DG+LYLNYS+ +Q+ W DVPG I +A+ANWP
Sbjct: 33 AQSVYTEGGIAIDGTDPVAYFTEGRPVAGAADITHDWRGATWRFAGVENRDAFAADPEAYAPQYGGYCAWAVAEGYTAATVPEAWRIEDGKLYLNYSQRIQKRWERDVPGNITRADANWP 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13356.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13356.2.1 >prot_P-wetherbeei_contig13356.2.1 ID=prot_P-wetherbeei_contig13356.2.1|Name=mRNA_P-wetherbeei_contig13356.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp MKRRLVLALLLAAAAFPVRAEIVNARGGLAIEGYDPVAYFAEGRARRGAVback to top mRNA from alignment at P-wetherbeei_contig13356:888..1328- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13356.2.1 ID=mRNA_P-wetherbeei_contig13356.2.1|Name=mRNA_P-wetherbeei_contig13356.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig13356:888..1328- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13356:888..1328- >mRNA_P-wetherbeei_contig13356.2.1 ID=mRNA_P-wetherbeei_contig13356.2.1|Name=mRNA_P-wetherbeei_contig13356.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig13356:888..1328- (Phaeothamnion wetherbeei SAG_119_79)back to top |