prot_P-wetherbeei_contig13342.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13342.1.1
Unique Nameprot_P-wetherbeei_contig13342.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length63
Homology
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BLAST of mRNA_P-wetherbeei_contig13342.1.1 vs. uniprot
Match: D7FYT0_ECTSI (Tub domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 7.940e-18
Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    3 LRCFLERDRGGTNVVNPVFTLYADLADGNGRLLMAARKVVRSVKAYYIICLRREDLFQ 60
            LRCF+ERDR GT+  +PVF++YADL DG+GR+L+AARK++ S  AYY IC R+EDLF+
Sbjct:  246 LRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFK 303
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BLAST of mRNA_P-wetherbeei_contig13342.1.1 vs. uniprot
Match: A0A482S1Y1_9ARCH (Tub domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1Y1_9ARCH)

HSP 1 Score: 65.5 bits (158), Expect = 6.300e-11
Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 0 
Query:    1 VALRCFLERDRGGTNVVNPVFTLYADLADGNGRLLMAARKVVRSVKAYYIICLRREDLFQ 60
            +  RC++ER+R G+ ++ P F+L ADL DG GR LM  RKV++S  A+YI  L+ EDL++
Sbjct:  286 ITTRCYIERNRSGSKMLAPYFSLCADLEDGTGRELMVCRKVLQSRSAHYIFSLKAEDLWR 345
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BLAST of mRNA_P-wetherbeei_contig13342.1.1 vs. uniprot
Match: A0A7S3HAI2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAI2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.470e-9
Identity = 26/57 (45.61%), Postives = 41/57 (71.93%), Query Frame = 0 
Query:    4 RCFLERDRGGTNVVNPVFTLYADLADGNGRLLMAARKVVRSVKAYYIICLRREDLFQ 60
            +C++ER+R G+ ++ P +++ ADL DG GR LM  RKV+RS   +YI  L+ EDL++
Sbjct:  161 KCYIERNRSGSKMLAPYYSICADLDDGTGRELMVCRKVMRSRSPHYIFSLKSEDLWR 217
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BLAST of mRNA_P-wetherbeei_contig13342.1.1 vs. uniprot
Match: A0A836C912_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C912_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.420e-8
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:    3 LRCFLERDRGG--------------TNVVNPVFTLYADLADGNGRLLMAARKVVRSVKAYYIICLRREDLF 59
            L+CF+ER R                T  + P+++LY ++ DG  RLLMAARKV++S   +YII  RR+DLF
Sbjct:  430 LQCFIERSRASMGTTSAFMLPIAMPTLSLTPIYSLYVEMPDGTVRLLMAARKVLKSKTPHYIISTRRDDLF 500
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13342.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FYT0_ECTSI7.940e-1863.79Tub domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A482S1Y1_9ARCH6.300e-1148.33Tub domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A7S3HAI2_9STRA2.470e-945.61Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A836C912_9STRA3.420e-842.25Tubby C-terminal-like domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 3..58
e-value: 3.9E-8
score: 33.3
IPR025659Tubby-like, C-terminalGENE3D3.20.90.10Tubby Protein; Chain Acoord: 1..61
e-value: 4.2E-8
score: 34.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13342contigP-wetherbeei_contig13342:212..662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13342.1.1mRNA_P-wetherbeei_contig13342.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13342 212..662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13342.1.1 ID=prot_P-wetherbeei_contig13342.1.1|Name=mRNA_P-wetherbeei_contig13342.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=63bp
VALRCFLERDRGGTNVVNPVFTLYADLADGNGRLLMAARKVVRSVKAYYI
ICLRREDLFQWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR025659Tubby-like_C