mRNA_P-wetherbeei_contig13299.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: D7FRX8_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX8_ECTSI) HSP 1 Score: 107 bits (266), Expect = 3.800e-25 Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWGDACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGN-DLLLTSGDSAQA 375
V ++ DHG L QLHP+FP +PYLFLFYS V P + W C R+V P+C+ A LERL + ++V+ G+C+ SF+ S N L EDWCS++ H N ++FY + LL+ +GDS+QA
Sbjct: 33 VNAWGDHGLLSSQLHPDFPAEPYLFLFYS---VAP---EGWAGECERIVKGL-PFCEQNAVLERLKIDVTVDDDGMCSDWSFSDSENNRVRLMEDWCSSAGAHHNAAMEFYTDGSLLVANGDSSQA 151
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: A0A4D9D6I0_9STRA (GSDH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I0_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.030e-12 Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWGDAC---PRLVN-----NQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGN-DLLLTSGDSA 369
VYS+WDHG L HP FP+QPYL++ YS++ + W D C P+ V + PYC+T A+L RL + + +A L +DWCS++ TH G + + + ++ +GD +
Sbjct: 85 VYSWWDHGLLSASFHPQFPQQPYLYIAYSSE----SPGNPWQDQCVPDPKKVAMTNPPDTRPYCKTMAKLVRLKVDPDLTSAKF------------DQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGS 200
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: A0A6J4Y925_9DELT (Cytochrome c551/c552 n=1 Tax=Olavius algarvensis Delta 1 endosymbiont TaxID=334747 RepID=A0A6J4Y925_9DELT) HSP 1 Score: 73.2 bits (178), Expect = 2.000e-12 Identity = 45/125 (36.00%), Postives = 59/125 (47.20%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWGDACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGND--LLLTSGDSA 369
VYS WD G LG+ +HP+FP PY+F+ Y+ D T W D CP C + RL RL ++ S N TG +L E W +H GDL F G D L +++GD A
Sbjct: 106 VYSGWDRGLLGLAIHPDFPNTPYIFVLYTFDADVGGTPPKWDDTCPDPPGYTAHGCTVSGRLSRLEMNTSTNQM---TGAE--------QVLIEAWEQQFPSHSIGDLHF-GPDGALYVSAGDGA 218
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: UPI001F1E23EF (PQQ-dependent sugar dehydrogenase n=1 Tax=Yinghuangia sp. KLBMP8922 TaxID=2908204 RepID=UPI001F1E23EF) HSP 1 Score: 71.2 bits (173), Expect = 9.040e-12 Identity = 45/130 (34.62%), Postives = 57/130 (43.85%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWG------DACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGNDLLLTS-GDSA 369
V+++WD G LG+++ PNFP P +F+ Y+ D T WG D C QT C T RL +LT N AG P V L DWC +H G L F + L S GD A
Sbjct: 119 VFNFWDRGMLGIEVSPNFPADPSVFVLYAHDAAPGKTAPYWGTAGTSADNCATPPGAQTYGCVITGRLSKLTAVGGGNTAG--------PEQV----LITDWCQQFPSHSTGSLAFGPDGYLYASAGDGA 236
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: H0KB25_9PSEU (PKD domain-containing protein n=4 Tax=Saccharomonospora azurea TaxID=40988 RepID=H0KB25_9PSEU) HSP 1 Score: 70.1 bits (170), Expect = 2.230e-11 Identity = 37/119 (31.09%), Postives = 54/119 (45.38%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWGDACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGNDLLLTS 357
V++ WD G LG+ +HP FPE+P+++ FY+ D T +W D CP C T RL +LT+ G++ AP L + WC +H L F + L S
Sbjct: 103 VFNGWDRGLLGLAVHPEFPEKPHVYAFYTRDAPPGQTAPVWNDQCPSPPGYTEDGCVVTNRLVKLTMGED--------GVAQAPET-----LVDGWCQQYPSHSADTLAFGPDGALYAS 208
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: A0A6J4XRR3_9DELT (Cytochrome c551/c552 n=1 Tax=Olavius algarvensis Delta 1 endosymbiont TaxID=334747 RepID=A0A6J4XRR3_9DELT) HSP 1 Score: 69.3 bits (168), Expect = 4.080e-11 Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWGDACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGND--LLLTSGDSA 369
VY+ WD G LG+ +HP+FP+ PY+++ Y+ D + WGD CP + C + RL RL G V +L E W +H GDL F G D L +T+GD A
Sbjct: 106 VYNAWDRGLLGLAIHPDFPQVPYIYVLYAFDADIDGSPPKWGDTCPNPPGHTDQGCTVSGRLSRLEAE----------GNQMKDPEV---VLIEAWEQQYPSHSIGDLHF-GPDGALYVTAGDGA 216
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: A0A4R7ZD84_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Kribbella sp. VKM Ac-2570 TaxID=2512221 RepID=A0A4R7ZD84_9ACTN) HSP 1 Score: 68.9 bits (167), Expect = 5.800e-11 Identity = 42/132 (31.82%), Postives = 59/132 (44.70%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWG------DACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGNDLLLTSGDSAQAS 378
V +YWD G LG+ LHP+FP+ P +++ Y+ DG+ WG D CP CQ +ARL +N G +L EDWC +H G ++F G D +L +G AS
Sbjct: 78 VDNYWDRGLLGLALHPDFPQDPRIYVLYTHDGLIGGPTPKWGTPDTADDPCPSPPGPTADGCQASARLS------VINGNGA------------EQVLVEDWCQVFPSHSIGSIEF-GPDGMLYAGAGDGAS 190
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: A0A366LQ62_9ACTN (Sugar dehydrogenase n=2 Tax=Spongiactinospora TaxID=2871671 RepID=A0A366LQ62_9ACTN) HSP 1 Score: 67.4 bits (163), Expect = 2.000e-10 Identity = 43/131 (32.82%), Postives = 59/131 (45.04%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWG------DACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGND--LLLTSGDSA 369
V+++WD G LGM LHP+FP+ P +++ Y+ D T WG D CP + C + RL L+ A A P L DWC +H GDL+F G D L ++GD A
Sbjct: 86 VHNFWDRGLLGMALHPDFPQDPRIYVLYTYDAPPGGTAPRWGTAGATDDPCPTPPGPTSDGCLVSGRLSVLS----------------ATGAETP--LVTDWCQQYPSHSVGDLEF-GRDGALYASAGDGA 197
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: UPI001CDA4393 (PQQ-dependent sugar dehydrogenase n=1 Tax=Wangella sp. NEAU-J3 TaxID=2878561 RepID=UPI001CDA4393) HSP 1 Score: 67.0 bits (162), Expect = 2.700e-10 Identity = 37/126 (29.37%), Postives = 55/126 (43.65%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWG------DACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGNDLLLTSG 360
V++YWD G +GM LHP+FP+ P +++ Y+ D T WG D CP + C + RL LTL + V ++ DWC +H G + F + +L SG
Sbjct: 94 VHNYWDRGLIGMALHPDFPDDPRIYVHYTYDAPIGGTAPTWGTEDSVDDDCPTPPGPLSDGCVVSGRLSTLTLD---------------GTGVTERVMINDWCMPFPSHSVGTVAFGPDGMLYASG 204
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Match: A0A0G4IYG1_PLABS (PKD domain-containing protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYG1_PLABS) HSP 1 Score: 66.6 bits (161), Expect = 3.790e-10 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 1 VYSYWDHGPLGMQLHPNFPEQPYLFLFYSAD---GVD-PTTNQLWGDACPRLVNNQTPYCQTTARLERLTLSISVNAAGICTGISFAPSAVNPYLLKEDWCSTSVTHGNGDLKFYGND-LLLTSGDSA 369
Y++WD G LG+ + N+P+ P+L++FYS + G+D P N CP ++ YC T A L R+ + + I +L DWCS S +H GDL + + L LT+GD A
Sbjct: 92 TYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCPA---DRHSYCGTAAHLVRVRVDVPRRKGTI------------EQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGA 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13299.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13299.1.1 >prot_P-wetherbeei_contig13299.1.1 ID=prot_P-wetherbeei_contig13299.1.1|Name=mRNA_P-wetherbeei_contig13299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp VYSYWDHGPLGMQLHPNFPEQPYLFLFYSADGVDPTTNQLWGDACPRLVNback to top mRNA from alignment at P-wetherbeei_contig13299:403..1201+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13299.1.1 ID=mRNA_P-wetherbeei_contig13299.1.1|Name=mRNA_P-wetherbeei_contig13299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=799bp|location=Sequence derived from alignment at P-wetherbeei_contig13299:403..1201+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13299:403..1201+ >mRNA_P-wetherbeei_contig13299.1.1 ID=mRNA_P-wetherbeei_contig13299.1.1|Name=mRNA_P-wetherbeei_contig13299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig13299:403..1201+ (Phaeothamnion wetherbeei SAG_119_79)back to top |