mRNA_P-wetherbeei_contig9930.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: D7FP69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 2.200e-12 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 28 ETKQKLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGT-KLRNLKIGAAMVGGGALLALTGGLA 342 E + +L +L+V + CGYDARTR+ FRRV + + W P V+ +ES LAR + R A D T + R KIGAAM+GGG LLA+TGGLA Sbjct: 98 EPRSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVAR------------DRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLA 191
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A5D6Y658_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y658_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 8.460e-8 Identity = 45/105 (42.86%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 40 KLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKLRNLKIGAAMVGGGALLALTGGLATPLI 354 +LL + L FT GYDAR R+L RR++ ++ I WR +V E + R L + A A P+ RN+ IGAA V GGALLA+TGGLA PLI Sbjct: 823 QLLEKQLWFTVKAIGYDARARVLLRRLADVMGIEWR-LVTLEEVVIGRALFAEATAMPLEKMAAAPSVW------DWKRNVAIGAAAVTGGALLAVTGGLAAPLI 920
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A2D4BS36_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS36_PYTIN) HSP 1 Score: 57.8 bits (138), Expect = 2.860e-7 Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 28 ETKQKLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKLRNLKIGAAMVGGGALLALTGGLATPLIIA 360 E + +L +LL FT GYDAR R L R + + +PW+ ++ E + R L + A A +P+ RN+ IGAA V GGALLALTGGLA P I A Sbjct: 231 EFQLTILKQLLWFTVKAVGYDARARTLLRVMVETMRLPWK-VITVEEISIGRTLFAEATAMPMEKAAAKPSVW------DWKRNVTIGAAAVTGGALLALTGGLAAPAIAA 334
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A225X3U7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3U7_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 5.210e-7 Identity = 47/125 (37.60%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 1 KDTFDDLSLET-KQKLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKL----RNLKIGAAMVGGGALLALTGGLATPLIIA 360 +DTF+ +++E + ++L LL FT + GYDAR R L RR+ + + W V E ++ + L + A A +P K+ RN IGAA V GGALLA+TGGLA P I A Sbjct: 119 EDTFELMTIENFRFEILKRLLWFTVKSVGYDARARTLLRRLVLAMELQWSD-VTREEVEIGQSLYAEATAMPLDKVAAKP----------KIWDWKRNAAIGAAAVTGGALLAVTGGLAAPAIAA 232
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A6A3L8H1_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L8H1_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.350e-6 Identity = 43/107 (40.19%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 40 KLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKLRNLKIGAAMVGGGALLALTGGLATPLIIA 360 +++ LL FT + GYDAR R L RR+ + + WR V E ++ + L + A A +P G RN IGAA V GGALLA+TGGLA P I A Sbjct: 175 EVVKRLLWFTVKSVGYDARARTLLRRLMLAMQLQWRD-VTREEVEIGQTLFAEATAMPLDKVAAKPKL-----WGDWKRNAAIGAAAVTGGALLAVTGGLAAPAIAA 275
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: H3GKH9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKH9_PHYRM) HSP 1 Score: 55.1 bits (131), Expect = 2.490e-6 Identity = 44/111 (39.64%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 40 KLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKL----RNLKIGAAMVGGGALLALTGGLATPLIIA 360 ++L LL FT + GYDAR R L RR++ L + W + E + + L + A A +P KL RN IGAA V GGALLA+TGGLA P I A Sbjct: 149 EILKRLLWFTVKSVGYDARARTLLRRLAVALQLQWTDLTQE-EVAIGQTLFAEATAMPLDKVAAKP----------KLWDWKRNAAIGAAAVTGGALLAVTGGLAAPAIAA 248
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A662WLI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLI0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.400e-6 Identity = 48/124 (38.71%), Postives = 60/124 (48.39%), Query Frame = 1 Query: 4 DTFDDLSLET-KQKLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKL----RNLKIGAAMVGGGALLALTGGLATPLIIA 360 D+ LS E + KLL LL FT GYDAR R L R + + + W + E ++ R L + A A +P K+ RN IGAA V GGALLA+TGGLA P I A Sbjct: 143 DSPSSLSAEAFRLKLLKRLLWFTVKAIGYDARARTLLRLLVVAMDLDWSAITRE-EVEIGRALYAEATAMPLDKVAAKP----------KIWDWKRNAAIGAAAVTGGALLAVTGGLAAPAIAA 255
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A383VL84_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VL84_TETOB) HSP 1 Score: 54.3 bits (129), Expect = 4.850e-6 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 85 YDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKLRNLKIGAAMVGGGALLALTGGLATPLIIA 360 YDAR R+ +RV+ L +PW + A+ + A+ L+ +A T + R L LK+GAA VGGGALLA+TGGLA P I A Sbjct: 541 YDARARVAVKRVAHWLRVPWPQVRAFEQMWAAQALSVDPSAQPTYSSGSRA-----------LTYLKVGAAAVGGGALLAVTGGLAAPAIAA 621
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A3R8CUC3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R8CUC3_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 6.310e-6 Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 40 KLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKL----RNLKIGAAMVGGGALLALTGGLATPLIIA 360 +++ LL FT + GYDAR+R LFRR+ + + W V E + +VL + A A +P K+ RN IGAA + GGALLA+TGGLA P I A Sbjct: 136 EVIKRLLWFTVKSVGYDARSRTLFRRLVLAMQLQWTD-VTKEEITIGQVLFAEATAMPLDKVAAKP----------KIWDWKRNAAIGAAAMTGGALLAVTGGLAAPAIAA 235
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Match: A0A3R7IQF8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IQF8_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 1.150e-5 Identity = 42/111 (37.84%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 40 KLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPMVAYIESQLARVLASRFAAPGTGGTAGRPAADAHAGEGTKL----RNLKIGAAMVGGGALLALTGGLATPLIIA 360 +++ LL F + GYDAR R L RR+ + + WR V E ++ + L + A A +P K+ RN IGAA V GGALLA+TGGLA P I A Sbjct: 15 EIVKRLLWFIVKSVGYDARARTLLRRLVVAMELDWRA-VTREEVEIGQTLYAEATAMPLDKVAAKP----------KIWDMKRNATIGAAAVAGGALLAVTGGLAAPAIAA 114 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9930.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9930.1.1 >prot_P-wetherbeei_contig9930.1.1 ID=prot_P-wetherbeei_contig9930.1.1|Name=mRNA_P-wetherbeei_contig9930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp KDTFDDLSLETKQKLLLELLVFTTVTCGYDARTRILFRRVSALLSIPWRPback to top mRNA from alignment at P-wetherbeei_contig9930:168..527- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9930.1.1 ID=mRNA_P-wetherbeei_contig9930.1.1|Name=mRNA_P-wetherbeei_contig9930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig9930:168..527- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9930:168..527- >mRNA_P-wetherbeei_contig9930.1.1 ID=mRNA_P-wetherbeei_contig9930.1.1|Name=mRNA_P-wetherbeei_contig9930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig9930:168..527- (Phaeothamnion wetherbeei SAG_119_79)back to top |